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Effects of disturbance and alien plants on the phylogenetic structure of riverine communities

Abstract

Questions: Phylogenetic analyses provide important insights in the study of biological invasions. Previous studies have shown contrasting effects of alien species on the phylogenetic structure of recipient communities. In this study, we focus on two riparian plant communities with contrasting natural disturbance regimes: riparian forests and river bar communities. We ask whether these communities differ in alpha diversity and degree of plant invasion. Further, are the phylogenetic diversity (PD) and structure of these habitats related to the level of plant invasion?. Location: Northern Spain. Methods: We determined level of plant invasion in forest and river bar vegetation plots, and calculated PD using mean pairwise distance (MPD) and mean nearest taxon distance (MNTD). We applied null models to analyse the phylogenetic structure of plots, and we tested whether inclusion of alien plant species was associated with differences in observed phylogenetic structure. Results: River bar plots experienced more invasion than forest plots, but the level of invasion was only related to the PD of native species in forests. Most plots had random phylogenetic structure, with a minority of plots tending to phylogenetic overdispersion in forests and to phylogenetic clustering in river bars. MPD increased with the inclusion of alien plant species in forest plots, suggesting phylogenetic overdispersion, while no such pattern was detected with MNTD. MPD increased slightly with increasing invasion in river bar plots, suggesting reduced clustering, while MNTD values decreased with increasing invasion, suggesting the opposite trend. Conclusions: Invasion by alien plants is differentially associated with phylogenetic structure in riparian habitats with different disturbance levels. Our results contrast with those of previous studies of plant invasion of riparian communities, which suggests geographic and ecological variation in the relationship between invasion and phylogenetic community structure in riparian systems. Research is needed to identify the causal factors underlying this variation. © 2020 International Association for Vegetation Science

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Effects of disturbance and alien plants on the phylogenetic structure of riverine communities

Author: Liendo Pérez, Diego,Biurrun Galarraga, Miren Idoia,Campos Prieto, Juan Antonio,García Mijangos, Itziar,Pearman, Peter Bretton
Publisher: Journal of Vegetation Science
Year: 2021
DOI: 10.1111/jvs.12933
Source: https://addi.ehu.eus/bitstream/10810/62197/1/JA_1756.pdf
J Veg Sci. 2021;32:e12933.  
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1 o 11
h ps://doi.o g/10.1111/j s.12933
Jou nal o Vege a ion Science
wileyonlinelib a y.com/jou nal/j s
Recei ed:16May2018
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Re ised:25July2020
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Accep ed:27July2020
DOI: 10.1111/j s.12933
RESEARCH ARTICLE
E ec s o dis u bance and alien plan s on he phylogene ic
s uc u e o i e ine communi ies
Diego Liendo1 | Idoia Biu un1 | Juan An onio Campos1 |
I zia Ga cía-Mijangos1 | Pe e B. Pea man1,2,3
©2020In e na ionalAssocia ion o Vege a ionScience
1Depa men o Plan BiologyandEcology,
Uni e si yo  heBasqueCoun yUPV/EHU,
Bilbao,Spain
2IKERBASQUEBasqueFounda ion o 
Science,Bilbao,Spain
3BC3BasqueCen e o Clima eChange,
Leioa,Spain
Co espondence
DiegoLiendo,Depa men o Plan Biology
andEcology,Uni e si yo  heBasque
Coun yUPV/EHU,Bilbao,Spain.
Email:[email protected]
Funding in o ma ion
EuskoJau la i za,G an /Awa dNumbe :
IT936-16
Co-o dina ing Edi o :Ingol Kühn
Abs ac
Ques ions: Phylogene icanalysesp o ideimpo an insigh sin hes udyo biologi-
calin asions.P e iouss udiesha eshowncon as inge ec so alienspecieson
hephylogene ics uc u eo  ecipien communi ies.In hiss udy,we ocuson wo
ipa ianplan communi ieswi hcon as ingna u aldis u bance egimes: ipa ian o -
es sand i e ba communi ies.Weaskwhe he  hesecommuni iesdi e inalpha
di e si yanddeg eeo plan in asion.Fu he ,a e hephylogene icdi e si y(PD)
ands uc u eo  hesehabi a s ela ed o hele elo plan in asion?
Loca ion: No he nSpain.
Me hods: Wede e minedle elo plan in asionin o es and i e ba  ege a ion
plo s, and calcula ed PD using mean pai wise dis ance (MPD) and mean nea es 
axondis ance(MNTD).Weappliednullmodels oanalyse hephylogene ics uc-
u eo plo s,andwe es edwhe he inclusiono alienplan specieswasassocia ed
wi hdi e encesinobse edphylogene ics uc u e.
Resul s: Ri e ba plo sexpe iencedmo ein asion han o es plo s,bu  hele elo 
in asionwasonly ela ed o hePDo na i especiesin o es s.Mos plo shad an-
domphylogene ics uc u e,wi hamino i yo plo s ending ophylogene ico e d-
ispe sionin o es sand ophylogene icclus e ingin i e ba s.MPDinc easedwi h
heinclusiono alienplan speciesin o es plo s,sugges ingphylogene ico e dis-
pe sion,whilenosuchpa e nwasde ec edwi hMNTD.MPDinc easedsligh lywi h
inc easingin asionin i e ba plo s,sugges ing educedclus e ing,whileMNTD al-
uesdec easedwi hinc easingin asion,sugges ing heopposi e end.
Conclusions: In asionbyalienplan sisdi e en iallyassocia edwi hphylogene ic
s uc u ein ipa ianhabi a swi hdi e en dis u bancele els.Ou  esul scon as 
wi h hoseo p e iouss udieso plan in asiono  ipa iancommuni ies,whichsug-
ges s geog aphic and ecological a ia ion in he ela ionship be ween in asion and
phylogene iccommuni ys uc u ein ipa iansys ems.Resea chisneeded oiden i y
hecausal ac o sunde lying his a ia ion.
KEYWORDS
aliene ec ,alienplan s,dis u bance,MNTD,MPD,no he nIbe ianPeninsula,phylogene ic
di e si y, ipa ian o es s, i e ba communi ies, ege a ionplo s
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Jou nal o Vege a ion Science LIENDO E aL.
1 | INTRODUCTION
Biodi e si y esea chonplan communi ieso en ocusesondi-
e si y a  he le el o  species, gene ally by quan i ying species
ichness and indices ha inco po a e species ela i e abundances
(Pee ,1974).Ne e heless, hebiodi e si yconcep includesaddi-
ionalcomponen sbesidesspecies ichness(Ca monae al.,2012;
Dainesee al.,2015).Among hese,phylogene icdi e si y(PD,i.e.,
heex en o e olu iona yhis o y ep esen edbyspecieswi hin
plan assemblages)isakeydesc ip o o plan communi ydi e si y
andisnowwidelyused(P ocheşe al.,2008;Benne e al.,2014;
B unbje ge al.,2014;Kusumae al.,2018).Inpa icula ,PDcan
p o ideinsigh sin oecologicalp ocesses ha a ec  heassem-
bly o  plan communi ies(Ca ende -Ba es e  al.,2009;Cado e
e  al.,2010; Pu schkee  al., 2013).Acco ding o hisapp oach,
co-occu ingspeciesinplan communi iescanexp ess andom,
o e dispe sedo clus e edphylogene icpa e ns,dependingon
whe he communi iesa e andomlyassembled,o con ainmo e
o  ewe dis an  ela i es hanexpec edunde  andomassembly.
Clus e edphylogene icpa e nsa ein e p e ed oindica e ha 
en i onmen al il e ingselec sspecies ha sha esimila  ai sand
ecological equi emen s(B unbje ge al.,2014;Lososo áe al.,
2015a), while o e dispe sed pa e ns sugges  he exis ence o 
compe i i eexclusion ha limi s hecoexis enceo closely ela ed
species(Webbe al.,2002).
Phylogene icanalysisp o ides impo an insigh sin he s udy
o biologicalin asion,whichisap inciplean h opogeniccauseo 
biodi e si y loss globally (Vi ousek e  al., 1997; Vilà e  al., 2006).
Speci ically, unde s anding he deg ee o which in ading species
ep esen no ele olu iona yo iginsiskey oin e ing hemecha-
nismso plan in asion(Bezenge al.,2013;Lie al.,2015;Vilàe al.,
2015). Empi ical s udies a  a wide ange o  spa ial scales p o ide
mixed e idence o  phylogene ic consequences o  plan  in asion,
wi h s udies suppo ing he associa ion o  species in asion wi h
phylogene icclus e ing(Win e e al.,2009;Lososo áe al.,2015a;
Loiola e  al., 2018), phylogene ic o e dispe sion (Ge hold e  al.,
2011;Bezenge al.,2013),o noappa en associa ion(Ca alloand
Cas o, 2017). Thesecon as ing esul sindica e heneed o  e-
sea chon heassocia iono alienplan swi h hePDands uc u e
o na i ecommuni ies,andonhowongoingan h opogenicandna -
u aldis u bancemayal e  hese ela ionships(Liendoe al.,2015;
Lososo áe al.,2015a).
Ripa ian habi a s b oadly expe ience high le els o  in asion
(Richa dson e  al.,2007; Pyšeke  al., 2010),wi h ipa ianplan 
communi ies( o es s,g a elba s, all-he bcommuni ies, i e ine
ma shes, e c.) di e ing in equency and co e  o  alien species
(Campose al.,2013;Liendoe al.,2015).Ripa iancommuni ies
di e  ina numbe o  ways ha  may in luence bo h he deg ee
o  in asion and communi y PD. Communi ies on i e  ba s a e
looded egula ly,in enselyando e longpe iodsasa esul o 
hei p oximalposi ionon he i e bed(Kalníko áe al.,2018).In
con as , ipa ian o es sa ehighe  han i e ba sinele a ion
ela i e o he channel cen e and, consequen ly, a e looded
du ing sho e  pe iods, and expe ience lowe  low and physical
dis u bance.
In hiss udy,weadd esshowplan in asionandna u aldis-
u banceco a ywi hPDandspeciescomposi ioninplan com-
muni iesin wophysicallyclose ipa ianhabi a s, ipa ian o es 
andni i ied i e ba .These wohabi a  ypesexpe iencena u al
loodingo di e ingin ensi iesanddu a ionsdue o hei dis inc 
opog aphic loca ions and p oximi y o channel cen e. We exam-
ine he ela ionshipsamonghabi a  ype,alienin asion andPD
usingplo da aonplan communi ycomposi ion.Weask:(a)do i-
pa ian o es sand i e ba plan communi ies,wi h hei con as -
ingna u aldis u bance egimes,di e inalphadi e si ypa e ns
anddeg eeo plan in asion?and(b)a e hePDands uc u eo 
hesehabi a s ela ed o hele elo plan in asion?Weexpec 
ha  hemo e equen andin ense loodingexpe iencedby i e 
ba s leads communi ies in his habi a o exhibi g ea e phyloge-
ne icclus e ing han ipa ian o es sasa esul o en i onmen al
il e ing, a ou ingclosely ela edspecies ha a eadap ed o he
dis u bance egime(Helmuse al.,2010).Asa esul o  his,we
expec ha he alien plan s colonising i e ba s will be closely
ela ed o he esiden communi y, husinc easinga e agephy-
logene icclus e ing(Lososo áe al.,2015a).Incon as ,en i on-
men al il e ingdue odis u bancemaybelessin ensein ipa ian
o es sand, hus,compe i ionmaybemo eimpo an  o species
assemblyin hishabi a .He e,weexpec  ha alienspecieswill
also include dis an ly ela ed species. Inc easing in asion in ipa -
ian o es shouldei he ha enoassocia ionwi hobse edPDo 
accompany inc eased o e dispe sion.
2 | METHODS
2.1 | S udy a ea and da a collec ion
This s udy was conduc ed in he ipa ian o es s and he ophy e
communi ies o  ni i ied i e  ba s in se e al Can ab ian i e s o 
no he nSpain(Figu e1a).These i e sa esho ands eep,wi h
as  unningwa e sandmode a e low educ ioninsumme when
i e ba seme ge(Liendoe al.,2015;Liendoe al.,2016).Ripa ian
o es s include alde  (Alnus glu inosa) and ash (F axinus excelsio )
o es so  heassocia ionsHype ico and osaemi-Alne um glu inosae
and S egnog ammo pozoi-Alne um glu inosae (Biu un e  al., 2016;
Figu e1b).Ri e ba communi iesincludeni ophilousmac o e o-
phy ecommuni ieso  heassocia ionBiden i ondosi-Polygone um
lapa hi olii(Campos,2010;Figu e1c).Wecons uc ed heda ase 
by conside ing da a on ege a ion plo s ha we e p e iously sam-
pled ollowing hephy osociologicalme hod(B aun-Blanque ,1951)
ands o edin heVege a ion-Plo Da abaseo  heUni e si yo  he
Basque Coun y (BIOVEG; GIVD code EU-00-011; Biu un e  al.,
2012).Whenmo e hanoneplo o ei he habi a wasa ailablein
hesameUni e salT ans e seMe ca o g idcello 1km×1km,we
selec edoneo  hem andomly.Plo size anged om100 o200m2
o  ipa ian o es sand10–50m2 o  i e ba s(AppendixS1).Plo s
16541103, 2021, 1, Downloaded om h ps://onlinelib a y.wiley.com/doi/10.1111/j s.12933 by Readcube (Lab i a Inc.), Wiley Online Lib a y on [13/06/2023]. See he Te ms and Condi ions (h ps://onlinelib a y.wiley.com/ e ms-and-condi ions) on Wiley Online Lib a y o ules o use; OA a icles a e go e ned by he applicable C ea i e Commons License
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wi hou  alien species we e excluded om he analyses. The inal
da ase included60 o es plo sand38 i e ba plo s om hepe-
iod1985–2015(AppendixS1),wi ha o alo 421species.Species
nomencla u e ollowsEu o+Med(2019).
2.2 | Di e si y pa e ns and le el o in asion o
o es s and i e ba s
Wecalcula ed he o alnumbe o na i eandalien axaa di e en 
axonomicle elsineachhabi a and hemeannumbe andco e o 
na i eandalien axaa plo le el.Wequan i ied hele elo plan 
in asionwi h h eeindices: henumbe o alienspeciesineachplo 
(absolu ealienspecies ichness,AR), hep opo iono alienspecies
inaplo ( ela i ealien ichness,RAR)and hep opo iono alien
speciesco e in ela ion o he o alplan co e inaplo ( ela i e
alienco e ,RAC;Ca o de al.,2012;Liendoe al.,2016).Allalien
plan species,i espec i eo  hei in asions a us,we eincludedin
he analyses. Wede e mined hes a is ical signi icance o  di e -
ences in di e si y measu es and le els o  plan  in asion be ween
ipa ian o es sand i e ba communi ieswi hS uden 's es s.
2.3 | Spa ial pa e ns
We es ed o spa ials uc u ein heda ase s o  o es and i e ba 
plo ssepa a elybygene a ingma iceso Jacca ddis ancesusing
he“ egan”Rpackage.We henconduc edMan el es so  hese
ma ices agains  he ma ix o  s aigh -line geog aphic dis ances
wi h he“ade4”Rpackage(D ayandDu ou ,2007).Innocasewas
spa ials uc u ede ec ed( andomisa ionp >0.05,n = 60 in ipa ian
o es s; andomisa ionp >0.05,n =38in i e ba s).Addi ionally,
spa ialau oco ela ion(SAC)in eg ession esidualswase alua ed
wi hMo an'sIusing heco elog() unc iono  hepackage“nc ”.To
emo ee ec so SACp io  odecisionsons a is icalsigni icance,
spa ial eigen ec o s we e gene a ed wi h he dnea neigh() and
Spa ialFil e ing() unc ionso package“spdep”(Bi andandWong,
2018).These ec o swe eadded oo dina yleas -squa es eg es-
sions, esul inginadjus edF-s a is icsande o deg eeso  eedom
o  hee ec so in e es .
2.4 | Phylogene ic di e si y and da a analyses
Aphylogene ic eewasassembled oincludena i eandalienspe-
ciesinbo hhabi a s.Somep e iouss udiesha eexcludedp e ido-
phy esbecauseo  hei ea lydi e genceand esul inglongb anch
leng hs,whichmays onglyin luenceobse edPD(VanMee beek
e al.,2014;Čeplo áe al.,2015).Howe e ,p e idophy esa ean
impo an na u alcomponen o Can ab ian ipa ian o es s(Biu un
e  al., 2016) and, consequen ly, we e included in he phylogeny
(Table 1). None heless, phylogene ic indices we e also calcula ed
excludingp e idophy es oassess hee ec o  hei inclusiongi en
hepo en ialin luenceo beingdis an ly ela edwi h espec  o he
dominan  angiospe m lo a, hei  mino  con ibu ion in i e  ba s
and heabsenceo alienp e idophy esin heda ase .Thecomple e
phylogenyincludingp e idophy escon ained413speciesandwas
cons uc edwi h he “phyloma ic” unc iono  he Rpackage“b -
anching”,using he ime-calib a edzanne2014 ee(Zannee al.,
2014)as he e e ence owhichspeciesnameswe ema ched.Ten
FIGURE 1 S udya eashowing he
lu ialne wo kand hemainci ies(a)and
exampleso a ipa ian o es (b)anda
i e ba (c)
16541103, 2021, 1, Downloaded om h ps://onlinelib a y.wiley.com/doi/10.1111/j s.12933 by Readcube (Lab i a Inc.), Wiley Online Lib a y on [13/06/2023]. See he Te ms and Condi ions (h ps://onlinelib a y.wiley.com/ e ms-and-condi ions) on Wiley Online Lib a y o ules o use; OA a icles a e go e ned by he applicable C ea i e Commons License
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p e idophy especieswe emissing om his ime-calib a ed ee,
so hey we e included as o he  congene ic o  con amilial spe-
cies. Addi ionally, we andomly esol ed 26 poly omies using he
“mul i2di” unc iono  heRpackage“ape” oob aina ully esol ed
ee(Pa adisandSchliep,2019).
Indiceso PDwe ecalcula edsepa a ely o  o es sand i e ba 
plo s o  hena i especiescomponen alone,andagainincluding
bo hna i eandalienspecies( ou communi yclassesin o al).Two
complemen a yPDindiceswe ecalcula ed:meanpai wisedis ance
(MPD)andmeannea es  axondis ance(MNTD).The i s o  hese,
MPD,is hea e agepai wisedis ancebe weenspeciesinaplo o 
communi yandisameasu eo  heo e allPD(Swenson,2014).In
con as ,MNTDis hemeandis ancebe weenaspeciesandi sclos-
es  ela i einaplo (Swenson,2014).Thismeasu e ocusesondi-
e si ya  he ipso  hecommuni yphylogeny,sinceclosely ela ed
speciesmaybeecologically simila and likely expe iences onge 
in e ac ions handis an  ela i es.SmallMNTD aluesindica e he
co-occu enceo closely ela edspecies.Theseindicescanbea -
ec edbydi e encesinspecies ichness(Vellende al.,2011).Fo 
his eason,wecalcula ed hes anda disede ec sizeso MPDand
MNTD,MPDSESandMNTDSES,whicha eequi alen  o henega i e
o  hene  ela ednessindexandnea es  axonindex(Webbe al.,
2002), espec i ely,andindependen o species ichness(Pa oine
and Bonsall, 2011). S anda disa ion was done by compa ing he
obse edMPDandMNTD alueswi h he alueso 999 andom
communi iesusing he“ axa.labels”nullmodelin he“pican e”pack-
age,whichshu leslabelso all axa in hephylogene icdis ance
ma ix(Kembele al.,2010), husholdingcons an species ichness
o plo sand hespecies u no e among hem.TheindicesMPDSES
and MNTDSES we e calcula ed as (MPDOBS–MPDRAND.MEAN)/SD
MPDRAND.MEAN,whe eMPDOBSis heobse edMPD,andMPDRAND.
MEAN and SDMPDRAND.MEANa e hemeanands anda dde ia iono 
expec edMPD om he andomisedcommuni ies, espec i ely.We
used hes anda disedindices o es  o non- andomphylogene ic
s uc u eo communi ies.Nea -ze o aluesindica e andomphylo-
gene ics uc u e,while aluesbelow−1.96o abo e+1.96 indica e
signi ican  clus e ing and o e dispe sion, espec i ely, wi h a 5%
Type-Ie o  a e(Lososo áe al.,2015a).Weusedspeciesp esence/
absence in calcula ing he aw and s anda dised indices in o de o
conside he en i e phylogeny and a oid bias caused by species dom-
inance(Loiolae al.,2018).
The s anda dised e ec  sizes o  MPD and MNTD we e used
o c ea e boxplo s o isualise he o e all phylogene ic s uc u e
a  hehabi a le elwi handwi hou inclusiono aliens,wi h hese
o e alldi e ences es edbymeanso  es s. These s anda dised
e ec sizeswe ealsousedin helinea  eg essionsassessing he
ela ionship be ween he PD o  he na i e communi ies and he
le elo plan in asion(AR,RARandRAC).Thele elo plan in a-
sionwaslog- ans o med(na u alloga i hm) oimp o eno mali yo 
esiduals.Finally,a  heplo le el hee ec o  heinclusiono alien
speciesonphylogene ics uc u e(i.e.,“aliene ec ”)wases ima ed
o eachplo sepa a elyas hedi e encebe ween hes anda dised
index calcula ed wi h na i e and alien species and he index calcu-
la edwi hna i especiesalone(Win e e al.,2009;QianandSandel,
2017).Thisaliene ec was eg essedagains  hes anda disedMPD
andMNTDo  hena i ecomponen o  ipa ian o es and i e ba 
plo s.Theassump ionso no mali yo  esidualsandhomoscedas-
ici ywe e es edwi h heShapi o-Wilkss a is icandplo so  e-
siduals.Allanalyseswe epe o medusingR e sion3.5.2(RCo e
Team,RFounda ion o S a is icalCompu ing,Vienna),andRcodeis
includedinAppendixS2.
3 | RESULTS
3.1 | Di e si y pa e ns and le el o in asion
A o alo 338 axa(includingsubspeciesand axaiden i ieda genus
le el)a e ep esen edin he60 o es plo s.O  hese axa,285a e
na i eand53a ealien.Asmanyas112 axa(33.1%)occu inonly
oneplo ,including85na i eand27alien axa.Themos  equen 
na i e species (occu ing in mo e han 50 plo s) a e A. glu inosa
(57),Hede a hibe nica(56),B achypodium syl a icum(55),Hype icum
and osaemum (54), Ca ex pendula (53) and F. excelsio (52).The
mos  equen alienspecies(occu inginmo e han20plo s)a e
C ocosmia × c ocosmii lo a(22),Pla anus hispanica(22)andRobinia
pseudoacacia (22). A o al o  238 axa (including subspecies and
hoseiden i ieda  hegene icle el)occu in he38 i e ba plo s,
including176na i eand62alien axa.Asmanyas78 axa(32.8%)
appea inonlyoneplo ,including58na i eand20alien axa.The
mos  equen na i especies(occu inginmo e han19plo s)a e
Ly h um salica ia (25), Pe sica ia lapa hi olia (25), P. maculosa (25),
Calys egia sepium(21),U ica dioica(20)andRumex ob usi olius(20).
Themos  equen alienspecies(occu inginmo e hannineplo s)
a e Paspalum dis ichum (25), Cype us e ag os is (23), Echinochloa
c us-galli (15), Bidens ondosus (12), Cype us longus (10), Digi a ia
sanguinalis(10)andE ige on lo ibundus(10).A o alo 131species
a e ounda leas onceinbo hhabi a s,which ep esen 57%o 
he i e ba da ase and40%o  he o es da ase .O  hese131
sha edspecies,59o  hemoccu in<5%o  o es plo s,includinga
TABLE 1 Meanplo  aluesands anda dde ia iono plan 
g oupsa di e en  axonomicle elsin ipa ian o es s(n =60)and
i e ba communi ies(n =38)o  heno he nIbe ianPeninsula
Fo es s Ri e ba s
Mean SD Mean SD
Angiospe mspecies 41.2 12.2 25.8 16.4
Gymnospe mspecies 0.1 0.2 0 0
P e idophy especies 4.2 20.5 0.6
Plan  amilies 30.8 6.3 14.4 7.5
Plan gene a 41.7 10.7 22.8 13.9
Exclusi elyalien
amilies
0.8 10.3 0.5
Exclusi elyaliengene a 1.9 1.5 3.2 2.5
16541103, 2021, 1, Downloaded om h ps://onlinelib a y.wiley.com/doi/10.1111/j s.12933 by Readcube (Lab i a Inc.), Wiley Online Lib a y on [13/06/2023]. See he Te ms and Condi ions (h ps://onlinelib a y.wiley.com/ e ms-and-condi ions) on Wiley Online Lib a y o ules o use; OA a icles a e go e ned by he applicable C ea i e Commons License
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numbe o annualand/o ni ophilousspeciesmo e ypicalo  i e 
ba s ha canoccasionallybe oundin ipa ian o es s(Appendix
S1).On heo he hand,61o  hesha edspeciesoccu in<5%o 
i e ba plo s,manyo  hembeinghe baceouso woodyspecies
cha ac e is ic o  ipa ian o es s ha  a e occasionally p esen  in
i e ba s(AppendixS1).Nosigni ican  ela ionshipbe weennum-
be so na i eandalienspeciesexis sin ipa ian o es s( P = 0.023;
d = 36; p =0.86),whils  he eisaposi i eandsigni ican  ela ion-
shipbe ween henumbe o na i eandalienspeciesin i e ba s
( P =0.35;d =58;p =0.028).
The mean numbe  o  angiospe m and p e idophy e species,
plan  amilies,andplan gene aishighe in o es plo s(Table1).
The mean numbe o  alien amiliesis also sligh ly highe in o -
es  plo s ep esen ing, on a e age, 2.6% o  plan  amilies com-
pa ed o2.1%o  amilies in i e  ba plo s. On he o he hand,
hemeannumbe o exclusi elyaliengene aishighe in i e ba 
plo s ep esen ing,ona e age,14.0%o plan gene acompa ed
o 4.6% in o es  plo s. When da a a e pooled wi hin habi a s,
o es s and i e  ba s show a simila  pe cen age o  alien ami-
lies (12.5% and 13.6%, espec i ely), whils  a  he genus le el
i e  ba s ha bou  subs an ially mo e alien gene a han o es s
(23.4% and 16.2%, espec i ely). Exclusi ely alien amilies in i-
pa ian o es s include Commelinaceae, My aceae, Mo aceae,
Balsaminaceae, Hyd angeaceae, Juglandaceae (wi h wo gene a,
Juglans and P e oca ya), Pla anaceae, Ga yaceae, Cannaceae
andBignoniaceae.Exclusi elyalien amiliesin i e ba sinclude
Ac inidiaceae,Mo aceae,Pla anaceaeandJuglandaceae.
Ri e ba communi iesha esigni ican ly highe alien ichness,
asRACandRAR, han do ipa ian o es s,bu  hey dono di e 
signi ican lyinalienco e (Table2).Fo es plo sshowposi i emean
MPDSES and MNTDSES alues, indica i e o  a endency owa ds
phylogene ico e dispe sion,while i e ba plo sexhibi nega i e
mean alues o bo hindices,indica i eo a endency ophyloge-
ne icclus e ing(Figu e2).Howe e , heses anda disedindicesa 
he plo  le el e eal ha  he majo i y o  plo s show no e idence
o ei he clus e ingo o e dispe sion(AppendixS3).None heless,
somedi e encesexis be ween hesehabi a s.Bo hMPDSES and
MNTDSESindica e ha  hena i ecomponen o  o es plo sissig-
ni ican lymo eo e dispe sed han ha o  i e ba plo s(Table3,
Figu e2).In ac ,30%o  o es plo sshowMPDSES alues ha in-
dica esigni ican phylogene ico e dispe sion,wi hasligh lylowe 
pe cen age o MNTDSES(AppendixS3).No o es plo isphyloge-
ne icallyclus e ed.On heo he hand,8%o  i e ba plo sp es-
en  MPDSES alues ha  indica e signi ican  clus e ing and his
pe cen ageinc eases o29% o MNTDSES(AppendixS3).Nei he 
indexindica esphylogene ico e dispe sion o any i e ba plo .
Whenp e idophy esa eexcluded om heanalyses,no o es plo 
is signi ican ly o e dispe sed wi h espec  o MPDSES, whils  he
pe cen ageo o e dispe sedplo s ega dingMNTDSES dec eases o
15%(AppendixS3).As o  i e ba plo s, he eisaninc easein he
pe cen ageo signi ican lyclus e edplo s o bo hMPDSES( om8%
o36%)andMNTDSES( om29% o52%).
3.2 | Le el o in asion and communi y
phylogene ic di e si y
Phylogene icdi e si yo  hena i ecomponen o  i e ba plo s,in
e mso bo h heMPDSESandMNTDSESindices,isno signi ican ly
ela ed o hele elo plan in asion(AppendixS4).To hecon a y,
aweaklynega i ebu signi ican  ela ionshipeme gesin o es plo s
be weenMNTDSESand hele elo plan in asion,ei he measu ed
asAR,RARo RAC(AppendixS4),indica ingdec easingle elso 
plan in asionin o es plo swi hhighe MNTDSES alues. In i e
ba s,despi esome eg essionsyieldingsigni ican s a is icale ec s
o someo  hespa ialeigen ec o s,nei he MPDSESno MNTDSES
we esigni ican ly ela ed oany a iable ep esen ing hele elo 
plan in asion(allp >0.05;AppendixS4).
3.3 | E ec o alien species on phylogene ic
ela edness
The eisasigni ican o e allinc easeinphylogene ico e dispe sion
in o es  plo sas indica edbyMPDSES when alien species a e in-
cludedin heanalysis(Figu e2,Table3).This ansla esin oanaddi-
ional10%inc ease( om30% o40%)in he o es plo sexhibi ing
signi ican o e dispe sion(AppendixS3).On hecon a y,nosuch
signi ican changeisobse edin heanalysiso MTNDSES.Simila 
TABLE 2 Mean plo alues and SDo  hele elo plan in asion
and he lo is icdi e si yindicesin ipa ian o es sand i e ba 
communi ieso  heno he nIbe ianPeninsula
Fo es s Ri e ba s
Fo es s s.
i e ba s
Mean SD Mean SD ( es )
Alien
co e (%)
20.64 28.02 30.33 28.10 −1.66(n.s.)
Na i e
co e (%)
245.16 77.15 103.7 46.63 11.32*
To al
co e (%)
265.80 72.05 134.03 54.91 10.23*
RAC(%) 8.21 11.05 21.34 17.42 −4.15*
Alien
ichness
(AR)
2.97 2.15 6.55 5.25 −3.99*
Na i e
ichness
43.10 12.36 19.79 13.98 8.41*
To al
ichness
46.07 12.59 26.34 16.59 6.27*
RAR(%) 6.84 5.11 26.97 14.23 −8.38*
Bon e onico ec ion o mul iplecompa isonswasapplied,
(αBon =0.00625).
Abb e ia ions:n.s.:non-signi ican di e ences;RAC, ela i ealien
co e ;RAR, ela i ealien ichness.
*p < 0.001.
16541103, 2021, 1, Downloaded om h ps://onlinelib a y.wiley.com/doi/10.1111/j s.12933 by Readcube (Lab i a Inc.), Wiley Online Lib a y on [13/06/2023]. See he Te ms and Condi ions (h ps://onlinelib a y.wiley.com/ e ms-and-condi ions) on Wiley Online Lib a y o ules o use; OA a icles a e go e ned by he applicable C ea i e Commons License

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esul swe eob ainedwhenp e idophy esa eexcluded(Appendix
S3).Thepe cen ageo  i e ba plo swi hsigni ican clus e ingin
MPDSESdec easesbysixpe cen wi h heinclusiono alienspe-
cies(AppendixS3)al hough hisisno signi ican (Figu e2,Table3).
The eisasigni ican o e allinc easeinphylogene icclus e ing,as
indica edbyMNTDSES,whenalienspeciesa eincluded(Figu e2,
Table3),which ansla esin oaninc easein heincidenceo clus-
e ingin i e ba plo sby5%(AppendixS3).Whenp e idophy es
a eexcluded, hepe cen ageo plo swi hsigni ican clus e ingin
MPDSESdec easesby25%wi h heinclusiono alienspecies,whils 
o MNTDSES he eisadec easein heincidenceo clus e ingby2%
(AppendixS3).
Simila ly,plo ing heinc emen ale ec o inclusiono aliens
agains  heMPDSESandMNTDSESo  hena i ecomponen illus-
a es hee ec o alieninclusiononPD(“aliene ec ”;Figu e3).
In o es  plo s, posi i e alien e ec s inc ease wi h inc easing
MPDSESo  hena i ecomponen (i.e.,wi hinc easingo e dis-
pe sion);mo e-o e dispe sedplo sa ee enmo eo e dispe sed
wi h headdi iono aliens(Figu e3a).Addi ionally, heMPDSES is
signi ican ly ela ed o healiene ec (ß1 =0.148;F1,58 =17.57;
p <0.001;AppendixS4).Theanalogouse ec o alieninclusion
o  i e ba da a,inwhichMPDSES alues a e p edominan ly neg-
a i e,isnon-signi ican .Whenp e idophy esa eexcluded om
hephylogene ic ee hee ec o alieninclusionin o es sbe-
comesnon-signi ican ,bu  a s ong inc ease o  healien e ec 
wi hdec easingMPDSESisde ec edin i e ba s,i.e., hemo e
clus e ed hena i ecommuni yis, hes onge  heposi i ee -
ec o alienspeciesisin hephylogene ics uc u e(AppendixS5).
On heo he hand, hee ec o  heinclusiono aliensin o es 
and i e ba plo sleads oli lechangeinMNTDSES when his
index o na i especiesisnega i e(i.e.,inphylogene icallyclus-
e edna i ecommuni ies).In i e ba plo s,howe e ,i becomes
inc easinglynega i ewhenMNTDSESo na i ecommuni iesin-
c eases owa dsze o(i.e.,inless-s onglyclus e edcommuni ies;
Figu e3b).Addi ionally, heMNTDSESissigni ican ly ela ed o he
aliene ec (ß1 =−0.192;F1,36 =6.24;p =0.018;AppendixS4).
Whenp e idophy esa eexcluded om heanalyses, he eg es-
siono aliene ec onMNTDSESisalsosigni ican in i e ba plo s
(AppendixS5).
FIGURE 2 Boxplo sshowing hemedianand hedispe siono  hes anda disedmeanphylogene icdis ance(MPDSES,le )and he
s anda disedmeannea es  axondis ance(MNTDSES, igh )in ipa ian o es sand i e ba communi ies.N:na i ecomponen ;T:whole
communi y(na i e+alienspecies).Le e sindica elacko signi ican di e encesa e applying heBon e onico ec ion o mul iple
compa isons(αBon =0.00625;seeTable3)
TABLE 3 T es sbe ween hena i eand o al(na i e+alien)
componen so  ipa ian o es sand i e ba swi h espec  o
hes anda disedmeanphylogene icdis ance(MPDSES)and he
s anda disedmeannea es  axondis ance(MNTDSES)
MPDSES MNTDSES
Fo es
To al s. na i e 6.46*−0.03(n.s.)
Ri e ba
To al s. na i e 2.37(n.s.) −4.45*
To al
Fo es  s. i e ba 11.60*12.10*
Na i e
Fo es  s. i e ba 11.78*9.88*
Bon e onico ec ion o mul iplecompa isonswasapplied
(αBon =0.00625).
Abb e ia ion:n.s.,non-signi ican di e ences.
*p < 0.001.
16541103, 2021, 1, Downloaded om h ps://onlinelib a y.wiley.com/doi/10.1111/j s.12933 by Readcube (Lab i a Inc.), Wiley Online Lib a y on [13/06/2023]. See he Te ms and Condi ions (h ps://onlinelib a y.wiley.com/ e ms-and-condi ions) on Wiley Online Lib a y o ules o use; OA a icles a e go e ned by he applicable C ea i e Commons License
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4 | DISCUSSION
Ou esul s a e consis en wi h p e ious esea ch showing ha
i e ba communi iesa eno ablymo ein aded han ipa ian o -
es s,wi h alueso in asionle elsimila  o hoseob ained o bo h
habi a salongA lan ic i e s(TabacchiandPlan y-Tabacchi,2005;
Campose al.,2013).Thehighe le elo in asionobse edin i e 
ba communi iesisp obably he esul o  hes onge hyd ological
dis u bance heyexpe ience ela i e o ipa ian o es (Da ise al.,
2000).Ri e ba seme geseasonallyinla esp inganda ecolonised
p ima ilybyannualspecies h oughseeddispe sal(Assini,2001).By
la eau umn oea lywin e , his ege a ionisalmos  o ally emo ed
bywa e  lowand,consequen ly,a a ie yo speciesmaycolonise
in a low-compe i ion en i onmen  (Hobbs and Huenneke, 1992).
Addi ionally, i e ba sin hes udya eaa econcen a eda lowel-
e a ionsnea humanse lemen s(Liendoe al.,2016).Asa esul ,
hey ecei eplen i ulnu ien s,especiallyni ogen,allowing o  he
es ablishmen o oppo unis icni ophilousalien he ophy es,such
as Ama an husspp.,Xan hium s uma ium and B. ondosus(Campos
e al.,2013;BolpagniandPio i,2015).
4.1 | Habi a ype and phylogene ic s uc u e
We oundsigni ican di e encesinMPDSESandMNTDSES be ween
ipa ian o es sand i e ba communi ies,apa e n ha isconsis -
en wi hp e ious indingsina a ie yo habi a so Cen alEu ope
andSou hA ica(P ocheşe al.,2015;Lososo áe al.,2015a).These
di e encesa eexp essedino e allnega i e alues o bo hPDin-
dicesin i e ba plo sandbyo e allposi i e aluesin o es plo s
(Figu e2).Thisindica es ha ,asexpec ed, hena i ecomponen 
is p edominan ly clus e ed in i e ba plo s and o e dispe sed in
o es plo s.Phylogene icallyclus e edpa e nsa ealso epo ed
omna u alhabi a s,suchascoas aldunes(B unbje ge al.,2014)
and oman h opogenichabi a ssuchasu banplan communi ies
(Čeplo á e  al., 2015). Phylogene ic clus e ing is consis en  wi h
en i onmen al il e ingd i enbydis u bance(B unbje ge al.,2012;
B unbje ge al.,2014;Lososo áe al.,2015a),whichwouldselec 
closely ela edspecies om ewlineages ha sha esimila ecologi-
cal equi emen s(Čeplo áe al.,2015),assuming ai conse a ism
ac oss hephylogene ic ee(bu seeGe holde al.,2015).Incon-
as , equen o e dispe sedphylogene ics uc u ein o es plo s
is consis en wi h less in ense hyd ological dis u bance and g ea e
habi a s abili y han oundon i e ba s.In hese o es s, hismay
p omo ecoexis enceo species omdis an lineages ianichedi -
e ences(Ki agawae al.,2015;Lososo áe al.,2015a).Addi ionally,
habi a  age has also been linked wi h he phylogene ic s uc u e
o plan communi ies(Lososo áe al.,2015b).In his ega d,o e -
dispe sed phylogene ic s uc u e may p e ail in his o ically olde
communi ies in which bio ic in e ac ions may be s onge han in
ecen lydis u bedcommuni ies.Fu he , o es s,andespecially i-
pa ian o es sinou s udya ea,ha bou se e alspeciesbelonging
ophylogene icallyoldanddis inc lineages,suchasp e idophy es,
which in luences phylogene ic pa e ns o  hese communi ies by
con ibu ing oPD(Lososo áe al.,2015b;Šipoše al.,2020).
Despi e i e ba communi ies being mo e in aded and phylo-
gene icallylessdi e se han ipa ian o es s,we indli leasso-
cia iono  hePDo  hena i ecomponen o ei he habi a wi h
le elso plan in asion.Wehadexpec edanega i e ela ionship
be weenPDandle elo speciesin asion(Lososo áe al.,2015a).
Only heMNTDSES alueso  o es plo sa eweakly, houghsigni i-
can ly,nega i ely ela ed o hele elo plan in asion(Appendix
S4).Thismeans ha ,in ipa ian o es s, hoseplo swhicha ephy-
logene icallymo edi e sea  he ipo  hephylogene ic ee(i.e.,
wi hspeciesbelonging odi e en gene a)a elesscolonisedby
alienplan s.Thus,ou  esul sa eonlypa lyconsis en wi hp e i-
ous s udies in which plan communi ies wi h g ea e phylogene ic
clus e ingexpe ienceinc easedin asionbyalienspecies(Ge hold
e al.,2011;Lososo áe al.,2015a;Nge al.,2018).Theses udies
epo  he ela ionshipbe weenPDandin asionac ossa a ie y
o spa ialex en sand esolu ions.Howe e ,ou s udywascon-
duc ed wi h small ege a ion plo s a a limi ed spa ial ex en and
FIGURE 3 Rela ionshipbe ween healiene ec (SES o –SESna )and heSES alueso  hemeanphylogene icdis ance(MPD;a)and
meannea es  axondis ance(MNTD;b)calcula ed o  hena i ecomponen in ipa ian o es sand i e ba communi ies.SES,s anda dised
e ec sizes.Fo pa ame e so  hesigni ican  eg essions,seeAppendixS4
16541103, 2021, 1, Downloaded om h ps://onlinelib a y.wiley.com/doi/10.1111/j s.12933 by Readcube (Lab i a Inc.), Wiley Online Lib a y on [13/06/2023]. See he Te ms and Condi ions (h ps://onlinelib a y.wiley.com/ e ms-and-condi ions) on Wiley Online Lib a y o ules o use; OA a icles a e go e ned by he applicable C ea i e Commons License
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Jou nal o Vege a ion Science LIENDO E aL.
wi hinjus  wocommuni y ypes.Thescopeo habi a  a ia ionin
as udycanin luenceobse ed ela ionshipsbe weenin asionin-
ensi yandphylogene iccommuni ys uc u e(Loiolae al.,2018),
and hismaybe hecauseo ou mixed esul s,wi haninc easein
in asionwi hinc easingphylogene icclus e ingonlyde ec ed o 
MNTDSESo  ipa ian o es plo s.
4.2 | Alien in asion, phylogene ic s uc u e and
scope o habi a a ia ion
We ound ha  hele elo in asionbyalienspeciesisassocia ed
wi hphylogene ics uc u eo  ipa ian o es sand i e ba com-
muni ies in con as ing ways.
Fi s ,inclusiono alienplan sinanalysiso  o es plo da asig-
ni ican lyinc easedo e allo e dispe sionasindica edbyMPDSES,
which ansla edin oa en-pe cen inc easeo  o es plo sexhib-
i ing signi ican  o e dispe sion, while no signi ican  change was
de ec edinMNTDSES(Figu e2,AppendixS3).This esul sugges s
ha  alien plan s in ading no he n Ibe ian ipa ian o es s ep-
esen  phylogene ically dis an  amilies no  p esen  in he na i e
lo a(Table1).These amiliesincludespeciessuchasT adescan ia
luminensis(Commelinaceae),P. hispanica(Pla anaceae)o Impa iens
bal ou ii(Balsaminaceae) ha inc ease hemeanphylogene icdis-
anceamongallspeciesin he o es plo s,inc easingphylogene ic
o e dispe sioninin adedplo s(Figu es2aand3a).Plo swi h el-
a i elys ongphylogene ico e dispe siono na i esmayp o ide
en i onmen al o bio ic condi ions ha p omo e in asion p ima ily
bynon- ela edand unc ionallydis inc  axa,pe hapsdue oexis -
ingle elso compe i iono niche illing, u he inc easing hele el
o o e dispe sion.Elsewhe einEu opealienspecieses ablishmen 
caninc easeo e dispe sionin o es communi ies(Lososo áe al.,
2015a). Despi e his gene al pa e n, Lososo á e  al. (2015a) also
showed ha allu ial o es sp esen con as ingpa e ns,wi hno
signi ican e ec due o heinclusiono alienspeciesonMPDSES,
bu inc easedclus e ingsignalledby endsinMNTDSES. These con-
as ing esul smayindica e ha  hein luenceo alienplan in asion
onphylogene ics uc u eisno uni o mac ossscaleso  ege a ion
assessmen .S udiesemployingsmallplo s ha co espondclosely
o hescalea whichbio icin e ac ionsoccu (Ca bonie al.,2013)
andwhe ealienspeciesmigh a ec na i especiesmos nega i ely
(S ohlg ene al.,1999;Ge holde al.,2011)mayp esen di e en 
phylogene ic pa e ns han s udies wi h la ge plo s ha con ain
subs an ial en i onmen al he e ogenei y. Al e na i ely, communi-
iesmay a yin hein luenceo pa icula  ai s ha a eac edon
byen i onmen al il e s,andin luen ial ai smayp esen di e ing
le elso phylogene icconse a ismindi e ing lo asandcommu-
ni ies.Thissugges s heneed o addi ional esea ch,including ield
expe imen s, ode e minekey unc ional ai s ha in luencecom-
muni y composi ion and he deg ee o which hose ai s demon-
s a e phylogene ic conse a ism.
Second,inclusiono alienspeciesinanalysiso  i e ba plo s
didno ha e asigni ican e ec  on heo e all alueso MPDSES,
al hough hepe cen ageo plo swi hsigni ican lyclus e eds uc-
u e dec eased by 6% (Figu e 2, Appendix S3). On he con a y,
inclusiono alienspeciesp oducedaweak,signi ican dec easein
MNTDSES,wi ha5%inc easein heincidenceo clus e inga  he
plo le el.The esponseo MPDSESsugges s ha onlya ewalien
species colonising i e  ba s come om majo  lineages wi h li le
ep esen a ion in he na i e communi y (Qian and Sandel, 2017),
asMPDSESmeasu es heo e allPDamongallspeciesin hecom-
muni y.In ac ,less hanoneplan  amilyis,ona e age,exclusi ely
aliena  heplo le el(Table1).Incon as , heinc easein hedeg ee
o phylogene icclus e ing egis e edwi hMNTDSES sugges s ha
alien plan species es ablishing in i e ba communi ies ha e some
close(congene ico con amilial) ela i esin hena i especiesas-
semblages,as hisindex ocuseson he ipso  hephylogene ic ee
(Swenson,2014).Thisispa lycon i medby he ac  ha in i e 
ba s he eisaconside ablenumbe o exclusi elyalienplan gene a
pe plo ,apa e nno  ounda  amilyle el(Table1).This a ia ion
couldmean ha aliengene abelong o amiliesal eadyp esen in
hena i e lo a(especiallyAs e aceaeandPoaceae),so ha  hee -
ec o alienspecieson hephylogene ics uc u eo  i e ba sis
close o he ipso  hephylogene ic ee, owhichMNTDSES is mos
sensi i e.Asimila pa e nhasbeen epo ed o plan communi-
ies along clima e g adien s in Cali o nia (Qian and Sandel, 2017)
andsugges s hep eadap a ionhypo hesis,whichs a es ha alien
specieswi haclosena i e ela i eha ebe e chanceso es ab-
lishmen (Schlaep e e al.,2010;Cado ee al.,2018).Inou case,
gi en he in ense hyd ological dis u bance o which i e ba s a e
subjec ed, hesealienspecieswouldincludespecieswi had an a-
geous ai s(annual, as -g owing,seed-dispe sedspecies;Campos,
2010)andecological equi emen ssimila  o hoseo na i especies,
aslikelyoccu samongAma an husspp.,E ag os isspp.,E ige on spp.
and Paspalum spp.
4.3 | E ec s o p e idophy e inclusion/exclusion
Finally,wehighligh  he implica ionso  p e idophy e inclusion on
obse edpa e ns.When heseplan sa eexcluded om heanaly-
ses,PDin o es plo sis educedandalienplan sha enosigni i-
can e ec onphylogene ics uc u e,measu edei he asMPDSES
o  MNTDSES (Appendix S5). The signi ican  posi i e ela ionship
be weenaliene ec andinc easingMPDSES(i.e.,inc easingo e d-
ispe sion,PD)o  o es plo sonlyappea swhenp e idophy esa e
included.Aliensdono inc easePDwhenp e idophy esa eomi ed,
which sugges s ha alien species a e dis ibu ed on he phylogene ic
eesimila ly ona i enon-p e idophy es.Theinclusiono p e ido-
phy esallowsde ec iono asigni ican e ec o alieninclusionon
MPDSES,pe hapsbecauseo  heg ea e PDin hemo einclusi e
da ase .Sincenoaliensa ep e idophy es, hise ec onMPDSES is
ullya ibu able oalienangiospe ms.
In con as  o o es plo s,alien plan sin i e ba plo s e-
duce phylogene ic clus e ing mo e in s ongly clus e ed plo s
(i.e.,s onge posi i e e ec s o  aliensonPD a  mo e-nega i e
16541103, 2021, 1, Downloaded om h ps://onlinelib a y.wiley.com/doi/10.1111/j s.12933 by Readcube (Lab i a Inc.), Wiley Online Lib a y on [13/06/2023]. See he Te ms and Condi ions (h ps://onlinelib a y.wiley.com/ e ms-and-condi ions) on Wiley Online Lib a y o ules o use; OA a icles a e go e ned by he applicable C ea i e Commons License
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9 o 11
Jou nal o Vege a ion Science
LIENDO E aL.
MPDses alues) haninweaklyclus e edones.Thisis e lec ed
in hep edominance o  i e ba  poin sin heuppe -le quad-
an and henega i eslopeo  he eg ession(Figu e3a,Appendix
S5A).Alienslead oamo e- andomphylogene ics uc u einplo s
wi hclus e edspeciesdis ibu ions,asmeasu edbyMPDSES,bu 
dono subs an iallya ec phylogene ics uc u ewhenisal eady
andom.Incon as ,aliensinc ease clus e ingin i e ba plo s
(g ea e nega i ealiene ec )whenMNTDSES aluesa enea ze o
(i.e.,lessclus e ing;Figu e3b),meaningaliensinc easeclus e ing
a  he e minal b anches o  he phylogene ic ee. When p e i-
dophy esa eexcluded, his end emainssigni ican (Appendix
S5B).Thus,ou  esul sdono  a ywi h heexclusiono p e ido-
phy es,demons a ingconsis en suppo  o e ec so alienson
PDin heda a om i e ba s.P e idophy esshouldbeincludedin
analysiso p e idophy e- ichcommuni iesino de  ounde s and
how alienspeciesmayin luence pa e nso  PDand unde lying
ecological p ocesses.
5 | CONCLUDING REMARKS
Thiss udy epo sda a om ege a ionplo sin wohabi a  ypes,
ipa ian o es sand i e ba  communi ies, ha di e inle elso 
na u al dis u bance wi hin he same ecosys em. I  o e s insigh 
on hepo en iale ec so alienplan soncommuni yphylogene ic
s uc u ein ipa ianhabi a s.Thesehabi a sdi e ma kedlyinle el
o plan in asion,whichshowsanuanced ela ionshipwi h hePD
o  hena i ecomponen o  he ege a ion.Alienplan sin luence
indiceso phylogene ics uc u eo bo hhabi a s,albei di e en ly.
Inaddi ion,ou  esul sdi e  omp e ious esea ch ha wasbased
onda a omwidelydi e ingcommuni y ypes,especially ega ding
ipa ian o es s,whe eMPDSES is he phylogene ic index ha sig-
ni ican lychangesdue o heinclusiono alienplan species.Fu he 
esea chshouldin es iga e he ela ionshipbe ween hescopeo 
habi a  a ia ionand hee ec so alienspeciesonobse edindi-
ceso di e si y,and he oleo p e idophy esinalienin asiono 
p e idophy e- ich plan communi ies.
ACKNOWLEDGEMENTS
Wewouldlike o hankMai eSolísandMe cedesHe e a o  hei 
helpwi h he ieldwo kandMa aTo ca o me hodologicalad ice
and aluable commen s on he manusc ip .
AUTHOR CONTRIBUTIONS
DL,IB,IGM,JACandPBPconcei edanddesigned he esea ch;
DLandPBPconduc ed heanalysesandled hew i ing;allau-
ho s discussed he esul s and c i ically commen ed on he
manusc ip .
DATA AVAILABILITY STATEMENT
Ripa ian o es and i e ba  ege a ionplo sused in hep esen 
wo ka eincludedin heVege a ion-Plo Da abaseo  heUni e si y
o  heBasqueCoun y, egis e edin heGlobalIndexo Vege a ion
Da abases(GIVDcode:EU-00-011;Biu une al.,2012).Theya e
a ailableinAppendixS1.Addi ionally,Rcode o  hecalcula iono 
hePDindicesa eincludedinAppendixS2.
ORCID
Diego Liendo h ps://o cid.o g/0000-0002-4816-4093
Idoia Biu un h ps://o cid.o g/0000-0002-1454-0433
Juan An onio Campos h ps://o cid.o g/0000-0001-5992-2753
I zia Ga cía-Mijangos h ps://o cid.o g/0000-0002-6642-7782
Pe e B. Pea man h ps://o cid.o g/0000-0002-0794-101X
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