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The THO complex as a key mRNP biogenesis factor in development and cell differentiation

Abstract

The THO complex is a key component in the co-transcriptional formation of messenger ribonucleoparticles that are competent to be exported from the nucleus, yet its precise function is unknown. A recent study in BMC Biology on the role of the THOC5 subunit in cell physiology and mouse development provides new clues to the role of the THO complex in cell differentiation.

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The THO complex as a key mRNP biogenesis factor in development and cell differentiation

Author: Jimeno González, Sonia; Aguilera López, Andrés
Publisher: BioMed Central
Year: 2010
DOI: 10.1186/jbiol217
Source: https://idus.us.es/bitstreams/027a76ea-a704-4730-848d-627a6ce9cfcf/download
As soon as he p e-mRNA has been ansc ibed om
DNA in he nucleus, i is p ocessed in o a ma u e
ibonucleop o ein (mRNP) pa icle, which is compe en
o be expo ed om he nucleus. The THO complex, a
nuclea p o ein complex conse ed om yeas o
humans, is in ol ed in he biogenesis o mRNP pa icles
and unc ions a he in e ace be ween ansc ip ion and
RNA expo (Figu e 1).
Al hough i is now clea ha he THO complex has a
ole in RNA me abolism, he ini ial s udies ha ended in
he iden i ica ion o his key complex had no hing o do
wi h ansc ip ion, mRNP biogenesis o RNA expo . The
i s known componen o THO, Hp 1, was iden i ied
h ough a gene ic sc een o hype - ecom binan mu an s
in Saccha omyces ce e isiae. Subsequen gene ic and
molecula cha ac e iza ion o mu an s in which he hp 1
gene had been dele ed (hp 1∆ mu an s) linked he hp 1∆
hype - ecombina ion pheno ype o ansc ip ion and
showed ha Hp 1 was in ol ed in ansc ip ional
elonga ion. Tho2 was hen iden i ied as a high-copy-
numbe supp esso o hp 1∆. Yeas ho2∆ mu an s also
showed a s ong hype - ecombina ion pheno ype ha
was linked o a ansc ip ion elonga ion de ec ( e iewed
in [1]).
Hype - ecombina ion could ha e been seen as jus a
side e ec o he physiological consequences o THO
mu a ions, bu i u ned ou o e eal a ole o THO in
o ming an op imal mRNP pa icle, one ha p e en s he
nascen RNA om in e ac ing wi h he DNA empla e. In
hp 1∆ mu an s, he nascen RNA o ms an RNA-DNA
hyb id (R-loop) wi h he DNA empla e s and, while he
o he DNA s and emains single s anded; he o ma ion
o such ‘R-loops’ is linked o hype - ecombina ion
( e iewed in [1]). Resea ch om an inc easing numbe o
labo a o ies has e ealed THO o be a conse ed nuclea
ac o wi h a key unc ion in mRNP biogenesis and
expo as well as in de elopmen and cell di e en ia ion.
A ecen ly epo ed analysis [2] o a condi ional knockou
Abs ac
The THO complex is a key componen in he
co- ansc ip ional o ma ion o messenge
ibonucleopa icles ha a e compe en o be expo ed
om he nucleus, ye i s p ecise unc ion is unknown.
A ecen s udy in BMC Biology on he ole o he THOC5
subuni in cell physiology and mouse de elopmen
p o ides new clues o he ole o he THO complex in
cell di e en ia ion.
© 2010 BioMed Cen al L d
The THO complex as a key mRNP biogenesis ac o
in de elopmen and cell di e en ia ion
Sonia Jimeno and And és Aguile a*
See esea ch a icle h p://www.biomedcen al.com/1741-7007/8/1
MINIREVIEW
*Co espondence: [email p o ec ed]
Cen o Andaluz de Biología Molecula y Medicina Regene a i a, A . Amé ico
Vespucio s/n, 41092 Se illa, Spain
Figu e 1. The THO complex unc ions in mRNP biogenesis a
he in e ace be ween ansc ip ion and expo o mRNA om
he nucleus. P o eins a e shown wi h hei yeas name ollowed by
he name o he human homolog, whe e he wo di e , o Nab2,
M 2/p15, Sub2/UAP56, Mex67/TAP, Y a1/ALY, o wi h he yeas name
ollowed by he D osophila name o Sus1/ENY2. P o ein complexes
a e shown in capi al le e s: THO, THSC (also called TREX-2) and SAGA.
P o eins ha in e ac wi h each o he o be ween which a physical
connec ion has been epo ed a e in he same colo . Sus1 can ac
as a subuni o bo h THSC and SAGA complexes. Unlabeled p o eins
in g ay ep esen o he ac o s impo an o mRNP biogenesis and
expo . NPC, nuclea po e complex; RNAPII, RNA polyme ase II.
NPC
Mex67/
TAP
Cy oplasm
Nucleus
RNAPII
Nab2
mRNA
SAGA
Sus1/
ENY2
THSC/
TREX-2
M 2/
p15
Sus1/
ENY2
Sub2/
UAP56
Y a1/
ALY
THO
Jimeno and Aguile a Jou nal o Biology 2010, 9:6
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© 2010 BioMed Cen al L d
mouse o he THOC5 subuni o THO adds new pe -
spec i es o he ole o THO in di e en ia ion.
THO as a conse ed physical and unc ional uni
wi h a ole in mRNP biogenesis
The yeas THO complex was i s pu i ied om
Saccha omyces ce e isiae wi h a agged His(6)-Tho2
unde high-sal condi ions as a obus ou -subuni
complex o med by Tho2, Hp 1, M 1 and Thp2. Null
mu a ions in all THO componen s con e he same
pheno ypes - ansc ip ion impai men , hype -
ecombina ion and de ec i e RNA expo - indi ca ing
ha THO is a unc ional and physical uni . Fu he
pu i ica ion o he THO complex oge he wi h he
mRNA expo ac o s Y a1 and Sub2, he la e o which
is an RNA-dependen ATPase in ol ed in mRNA expo ,
in a la ge complex e med TREX ( ansc ip ion-expo
complex), and he iden i ica ion o Sub2 as a high-copy
supp esso o hp 1∆ led o he connec ion o THO wi h
RNA expo ( e iewed in [1]). This conclusion was
s eng h ened by he obse a ion ha sub2 mu an s led o
a simila ansc ip ion-dependen hype - ecombina ion
pheno ype o ha o THO-complex mu an s and ha
hese also show RNA-expo de ec s. Ne e heless, he
physical in e ac ions among he THO componen s a e
much s onge han hose wi h o he componen s o
TREX. THO is s able in high sal condi ions in he
absence o Y a1 and in which Sub2 is p esen in ace
amoun s ha can be de ec ed only by wes e n blo ing
( e iewed in [1]). Indeed, he in eg i y o he yeas THO
complex equi es Hp 1, Tho2, M 1 and Thp2 bu no
Sub2 [3]. The human o D osophila THO complexes also
con ain hTho2/THOC2, hHp 1/THOC1, Tex1/THOC3
and h ee addi ional subuni s called THOC5, THOC6
and THOC 7. The Sub2 o holog UAP56 can be de ec ed
in low amoun s in D osophila and is absen in human
cells immunodeple ed o hTho2, indica ing ha in hese
o ganisms he co e THO complex exis s as a sal - esis an
s able complex independen o UAP56 and Y a1 [4,5].
In yeas , THO binds o ac i e ch oma in in an RNA-
independen manne . A plausible scena io is as ollows
(Figu e 1): THO could be one o he i s playe s o ac
du ing ansc ip ion elonga ion o acili a e a co ec
mRNP o ma ion helping ec ui o he ac o s, such as
Sub2 o Mex67 [6]. O he RNA binding p o eins, such as
Y a1, which in e ac s wi h Sub2, and he Mex67-M 2
expo ac o , could ac a subsequen s eps in his
scena io o b ing he mRNP o he nuclea po e complex.
THO helps ec ui Mex67 o he mRNP h ough Hp 1,
an in e ac ion ha is egula ed by Rsp5, an ubiqui in
ligase ha polyubiqui ina es Hp 1 [7]. Close o he
nuclea po e complex, he THSC complex, also e med
TREX-2, could ha e an as-ye unknown unc ion in
mRNP biogenesis and expo . In e es ingly, mu a ions in
THSC con e he same pheno ypes o ansc ip ion
elonga ion impai men , de ec i e RNA expo and
ansc ip ion-dependen hype - ecombina ion as do
THO mu a ions ( e iewed in [1]).
Human THO associa es wi h p o eins o he spliceo-
some and wi h spliced RNAs, his la e in e ac ion being
independen o ansc ip ion [4,8]. Howe e , he e is also
e idence o ansc ip ion-dependen ec ui men o
THO o ch oma in in D osophila [9]. The ole o THO in
mRNP me abolism he e o e may be gene al among
euka yo es. The ecen obse a ion ha D osophila THO
complex in e ac s wi h ENY2, a p o ein p e iously
iden i ied as a ansc ip ional ac i a o ha in e ac s wi h
he SAGA ansc ip ion ac o , opens up he possibili y o
a co- ansc ip ional ac ion o THO in highe euka yo es
[9]. The impac o THO in RNA physiology, howe e ,
may go beyond ansc ip ion elonga ion and i s asso cia-
ed RNA me abolism s eps, as shown by he in ol emen
o THO in mRNA 3’ end p ocessing, whe he o no
di ec , and by he iden i ica ion in yeas THO mu an s o
a la ge nuclea mac omolecula s uc u e con aining
componen s o he nuclea po e complex and poly-
adenyla ion ac o s [10].
Func ion o THO in de elopmen and
di e en ia ion
The ele ance o THO in cell physiology has been clea ly
shown om yeas o humans. Yeas THO null mu an s
a e sick and slow g owe s and THO deple ion has a
nega i e e ec on g ow h a e o human and D osophila
cell lines. THO is equi ed o iabili y o he ea ly mouse
emb yo and o pos na al su i al, as de e mined by a
THOC1 knockou [2,11]. Whe he he ele ance o THO
unc ion is a consequence o a gene al, genome-wide ole
o whe he i s ole is limi ed o a subse o genes is s ill an
open ques ion. In humans and D osophila, a ious
s udies ha e shown ha THO is equi ed o he expo
o hea shock mRNAs, bu no hing is known abou o he
mRNAs. Simila ly, i is unknown whe he THO unc ion
is equi ed equally in di e en cell issues and h oughou
de elopmen and di e en ia ion. Impo an ly, howe e ,
THOC1 condi ional knockou mice e eal abno mal
es is de elopmen ha causes s e ili y [12]. Unde s and-
ing he ele ance o THO in de elopmen and issue
di e en ia ion as well as i s pu a i e impac in cance and
cell p oli e a ion should p o ide a be e unde s anding
o i s unc ional ole.
One s ep owa ds his unde s anding is he epo by
Mancini e al. [2], who ha e cons uc ed and cha ac e -
ized an in e e on-inducible c e- ecombinase based
condi ional THOC5 knockou mouse. THOC5 dele ion
causes dea h in he i s 2 weeks, simila o THOC1
dele ion. Mice wi h he condi ional knockou de elop
acu e leukocy openia (a educ ion in whi e blood cell
Jimeno and Aguile a Jou nal o Biology 2010, 9:6
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Page 2 o 3
numbe s) and anemia (a educ ion in ed blood cell
numbe s). The numbe o blood cells in pe iphe al blood
is educed d as ically; his is caused by apop osis o bone
ma ow cells and loss o commi ed myeloid p ogeni o
cells and o cells wi h long- e m econs i u ing po en ial.
The ans e o no mal bone ma ow cells escued 70% o
he mice om dea h. The da a [2] suppo he hypo hesis
ha THOC5 is c i ical in bone ma ow and in hema o-
poiesis, bu no o hepa ocy es and hea muscles. The
esul s a e consis en wi h p e ious wo k om his same
g oup ( e e enced in [2]) showing ha human THOC5
a ec s g anulocy e/mac ophage di e en ia ion and
adipo cy e di e en ia ion, and u he suppo he idea
ha he THO complex has a key ole no only in ea ly
emb yogenesis, bu also in di e en ia ion, as p e iously
epo ed wi h THOC1 knockou mice [11,12].
In he nea u u e i would be in e es ing o know
whe he he subuni s o he THO complex ha e di e en
oles in he di e en ia ion o dis inc cell ypes. And i
would ce ainly be impo an o unde s and how he ole
o he THO complex in de elopmen and di e en ia ion
is ela ed o i s molecula unc ion in mRNP biogenesis
and expo . Among he a ious possibili ies ha would
need o be in es iga ed o unde s and he ole o his
in iguing complex in di e en ia ion a e whe he o no
he THO complex has speci ic unc ions in di e en cell
ypes and how his migh be ela ed o pa icula unc-
ions ha THO could ha e o speci ic a ge mRNAs o
depending on he pu a i e THO p o ein modi ica ions
(phospho yla ion, ubiqui ina ion, and so on) ha migh
change i s pa e n o ac i i y.
Acknowledgemen s
We hank R Luna and AG Rondón o c i ical eading o he manusc ip . The
wo k o AA’s labo a o y is unded by he Spanish Minis y o Inno a ion and
Jun a de Andalucía.
Published: 28 Janua y 2010
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Jimeno and Aguile a Jou nal o Biology 2010, 9:6
h p://jbiol.com/con en /9/1/6
doi:10.1186/jbiol217
Ci e his a icle as: Jimeno S, Aguile a A: The THO complex as a key mRNP
biogenesis ac o in de elopmen and cell di e en ia ion. Jou nal o Biology
2010, 9:6.
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