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Furin deficiency in myeloid cells leads to attenuated revascularization in a mouse-model of oxygen-induced retinopathy

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Furin deficiency in myeloid cells leads to attenuated revascularization in a mouse-model of oxygen-induced retinopathy

Author: Vähätupa, Maria,Martinez Cordova, Zuzet,Barker, Harlan,Aittomäki, Saara,Uusitalo, Hannu,Järvinen, Tero AH,Pesu, Marko,Uusitalo-Järvinen, Hannele
Year: 2018
Source: https://trepo.tuni.fi/bitstream/10024/102567/1/furin_deficiency_in%20_myeloid_2018.pdf
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Fu in deficiency in myeloid cells leads o a enua ed e ascula iza ion in a
mouse-model o oxygen-induced e inopa hy
Ma ia Vähä upa
a
, Zuze Ma inez Co do a
a,b
, Ha lan Ba ke
a
, Saa a Ai omäki
a,b
,
Hannu Uusi alo
a,c,∗
, Te o A.H. Jä inen
a,d
, Ma ko Pesu
a,b,e
, Hannele Uusi alo-Jä inen
a,c
a
Facul y o Medicine & Li e Sciences, Uni e si y o Tampe e, Tampe e, Finland
b
Immuno egula ion, Ins i u e o Biosciences and Medical Technology (BioMediTech), Uni e si y o Tampe e, Tampe e, Finland
c
Eye Cen e, Tampe e Uni e si y Hospi al, Tampe e, Finland
d
Depa men s o Musculoskele al Diso de s, Tampe e Uni e si y Hospi al, Tampe e, Finland
e
Depa men s o De ma ology, Tampe e Uni e si y Hospi al, Tampe e, Finland
ARTICLE INFO
Keywo ds:
Angiogenesis
Fu in
Mac ophage
Oxygen-induced e inopa hy model
Hypoxia
ABSTRACT
Ischemic e inopa hy is a ision- h ea ening disease associa ed wi h ch onic e inal inflamma ion and hypoxia
leading o abno mal angiogenesis. Fu in, a membe o he p op o ein con e ase amily o p o eins, has been
implica ed in he egula ion o angiogenesis due o i s essen ial ole in he ac i a ion o se e al angiogenic
g ow h ac o s, including ascula endo helial g ow h ac o -C (VEGF-C), VEGF-D and ans o ming g ow h
ac o - β(TGF- β). In he p esen s udy, we e alua ed exp ession o u in in he e ina and i s ole in e inal
angiogenesis. As bo h inflamma ion and hypoxia con ibu e o angiogenesis, he ole o u in was e alua ed
using myeloid-cell specific u in knockou (KO) mice (designa ed LysMC e- u
(fl/fl)
) bo h in de elopmen al e -
inal angiogenesis as well as in hypoxia-d i en angiogenesis using he oxygen-induced e inopa hy (OIR) model.
In he e ina, u in exp ession was de ec ed in endo helial cells, mac ophages and, o some ex en , in neu ons.
The a e o angiogenesis was no diffe en in LysMC e- u
(fl/fl)
mice when compa ed o hei wild- ype li e ma es
du ing de elopmen . In he OIR model, he e ascula iza ion o e ina was significan ly delayed in LysMC e-
u
(fl/fl)
mice compa ed o hei wild- ype li e ma es, while he e was no compensa o y inc ease in he p e e inal
neo ascula iza ion in LysMC e- u
(fl/fl)
mice. These esul s demons a e ha u in exp ession in myeloid cells
plays a significan ole in hypoxia-induced angiogenesis in e ina.
1. In oduc ion
Ischemic e inopa hies, such as e inopa hy o p ema u i y (ROP),
p oli e a i e diabe ic e inopa hy (PDR), and e inal ein occlusion
(RVO) a e majo causes o isual impai men and blindness in in-
dus ialized coun ies (Fong e al., 2004; Jonas e al., 2017; Reynolds,
2014). Re inal ischemia induces he s abiliza ion o a ansc ip ion
ac o hypoxia inducible ac o -1α(HIF-1α), which u ns on he ex-
p ession o a la ge numbe o angiogenic genes such as ascula en-
do helial g ow h ac o (VEGF) (Campochia o, 2015). This leads o
e inal neo ascula iza ion associa ed wi h i eous hemo hages and
fib osis o neo ascula memb anes causing ac ional e inal de ach-
men and, ul ima ely, blindness (Campochia o, 2015).
Re inal ischemia is also associa ed wi h inflamma o y mani es a-
ions. Hypoxia a ac s mac ophages in o hypoxic a eas (Mi amu a
e al., 2005; Tsu sumi e al., 2003) whe e he hypoxia-ac i a ed mac-
ophages and mic oglia, he immune cells o he e ina, elease no only
p oinflamma o y bu also angiogenic cy okines. In diabe ic e inopa hy
(DR), bo h in ading mac ophages and esiden mic oglia ha e been
implica ed in he pa hogenesis o he e inopa hy e inopa hy
(Abcouwe , 2012). O no e, mac ophages ha e been shown o be he
main sou ce o VEGF-C in he e ina. In he e ina, VEGF-C signaling
pa hway egula es he b anching o blood essels (Tammela e al.,
2011). VEGF-C is ini ially syn hesized as an inac i e p ecu so and e-
qui es ac i a ion by a p op o ein con e ase sub ilisin/kexin (PCSK)
amily membe u in o become biologically ac i e (Sieg ied e al.,
2003b).
P op o ein con e ase sub ilisin/kexin (PCSK) amily enzymes a e a
amily o nine p o eases (PCSK1-2, u in, PCSK4-7, MBTPS1, PCSK9)
ha clea e and con e hei imma u e a ge p o eins in o biologically
ac i e o ms by ca alyzing endop o eoly ic clea age a a a ge si e
ypically made up o he basic amino acids a ginine and lysine
(Tu peinen e al., 2013). Acco dingly, PCSK enzymes play a key eg-
ula o y ole in a mul i ude o biological e en s go e ned by he g ow h
h ps://doi.o g/10.1016/j.exe .2017.10.013
Recei ed 4 Janua y 2017; Recei ed in e ised o m 1 Sep embe 2017; Accep ed 11 Oc obe 2017
∗
Co esponding au ho Facul y o Medicine & Li e Sciences, 33014, Uni e si y o Tampe e, Finland.
E-mail add ess: llhauus@u a.fi(H. Uusi alo).
Expe imen al Eye Resea ch 166 (2018) 160–167
A ailable online 13 Oc obe 2017
0014-4835/ © 2017 The Au ho s. Published by Else ie L d. This is an open access a icle unde he CC BY-NC-ND license (h p://c ea i ecommons.o g/licenses/BY-NC-ND/4.0/).
T
ac o s (Tu peinen e al., 2013). Among he PCSK amily membe s,
u in is a ubiqui ously exp essed p o o ypical se ine endop o ease e-
cen ly implica ed o play a key ole in a ious biological p ocesses such
au oimmuni y and inflamma ion, and a ious human diseases (Oksanen
e al., 2014; Pesu e al., 2008; Tu peinen e al., 2013; Vähä upa e al.,
2016a). In fib o ascula issue om PDR pa ien s, u in exp ession was
shown o co-localize wi h one o i s clea age a ge s, a (p o)- enin e-
cep o p o ein, whose exp ession le el is ele a ed in PDR and asso-
cia ed wi h angiogenic ac i i y, sugges ing ha u in clea age has a ole
in DR (Kanda e al., 2012).
In addi ion o VEGF-C (Kha ib e al., 2010; Sieg ied e al., 2003a),
u in is also equi ed o he ac i a ion o a la ge numbe o o he
p oangiogenic g ow h ac o s, such as VEGF-D (McColl e al., 2007),
pla ele de i ed g ow h ac o s A and B (PDGF-A and –B) (Sieg ied
e al., 2003b, 2005), bone mo phogene ic p o ein-4 (BMP-4) (Cui e al.,
1998) and ans o ming g ow h ac o -β(TGF-β)(Dubois e al., 2001).
On he o he hand, he exp ession o u in i sel can be induced by
hypoxia, as i is one o he a ge genes o HIF-1α(Ma e al., 2017;
McMahon e al., 2005; Sil es i e al., 2008). Despi e being linked o
angiogenesis, he unc ions o u in in hese p ocesses a e s ill poo ly
known, bu he pheno ype o he o al u in knockou (KO) mice,
le hali y du ing emb yonal de elopmen due o ca dio ascula de ec s,
sugges ed blood essel specific unc ions (Roeb oek e al., 1998;
Scamuffa e al., 2006). This no ion was confi med by endo helial spe-
cific u in KO ha also led o emb yonal dea h due o ascula de ec s,
and by he endo helial cells lacking u in ha we e unable o g ow
ex i o (Kim e al., 2012).
As endo helial cells lacking u in canno g ow a all (Kim e al.,
2012), we decided o elucida e he ole o u in on e inal angiogenesis
by add essing he exp ession o u in in he e ina and by assessing he
effec o myeloid cell-de i ed u in on e inal angiogenesis using u in
condi ional KO mice (myeloid cell-specific u in KO; LysMC e- u
(fl/fl)
).
The effec o myeloid cells-de i ed u in on angiogenesis was s udied in
de elopmen al e inal angiogenesis, as well as in hypoxia-induced an-
giogenesis in a mouse-model o oxygen-induced e inopa hy (OIR),
which is he mos widely used model o ischemic e inopa hies
(Conno e al., 2009; Smi h e al., 1994). In he OIR model, bo h e-
c ui ed, blood-de i ed mac ophages as well as he esiden mac o-
phages o he e ina, mic oglia, ha e been shown o pa icipa e in he
egula ion o angiogenesis (Checchin e al., 2006; Gao e al., 2016;
Ka aoka e al., 2011; Zhou e al., 2015).
2. Resul s
2.1. Fu in is exp essed in mac ophages and e inal mic oglia
Using da a om published genome-wide exp ession s udies, he
e inal-cell specific E-GEOD-33089 expe imen and he much wide
sea ching FANTOM p ojec , we ex ac ed exp ession da a o u in in
cells ela ed o e ina. In he la ge , bu a less specific, FANTOM
p ojec cDNA analysis o u in exp ession showed he highes alues in
monocy e de i ed mac ophages (Fig. 1A). In he e inal cell-specific
expe imen , based on 155 samples analyzed by mic oa ay, he highes
u in exp ession was ound in mic oglia (Fig. 1B).
2.2. Fu in is exp essed in he e ina du ing de elopmen and in he OIR
model
To u he s udy he ole o u in on e inal angiogenesis in i o,we
fi s de e mined a empo al and spa ial exp ession p ofile o u in in WT
mice du ing de elopmen and in he OIR model. Immunohis ochemis y
showed a ew cells wi h weak exp ession o u in in e ina a P4
(pos na al day 4), and he ea e he exp ession o u in was sub-
s an ially s onge om P7 onwa ds a all s udied ime poin s du ing
de elopmen (Fig. 1C). In he OIR model, s ong exp ession o u in was
de ec ed in he ascula laye s o he e ina a P14 and P17 (Fig. 1D).
Using double-immunohis ochemis y o u in and o endo helial cells
ma ke CD31 as well as o u in and mac ophage ma ke F4/80, u in
exp ession was localized o endo helial cells (Fig. 1E–F) in he e ina
and in he p e e inal ascula u s as well as o mac ophages su -
ounding blood essels (Fig. 1G–H) in OIR e inas. In addi ion o hese
cells, u in immuno eac i i y was also de ec ed in neu ons in he e ina
(Fig. 1).
2.3. Lack o u in in myeloid cells does no influence he a e o
de elopmen al angiogenesis
To in es iga e he ole o u in in angiogenesis, we s udied mice
deficien o u in gene exp ession in myeloid cells (LysMC e- u
(fl/fl)
)
and hei espec i e wild- ype li e ma es (LysM WT) du ing de elop-
men al e inal angiogenesis and du ing ischemia induced e inal an-
giogenesis using oxygen-induced e inopa hy model (OIR). LysMC e-
u
(fl/fl)
mice a e e ile wi hou no ob ious mo phological abno mal-
i ies (Co do a e al., 2016), and hei eyes appea no mal upon his o-
logical examina ion. As o al deple ion o esiden e inal mac ophages
has been shown o slow down he a e o de elopmen al e inal an-
giogenesis (Checchin e al., 2006), we fi s explo ed whe he myeloid
cell de i ed u in influences he a e o supe ficial ascula plexus
o ma ion (de elopmen al angiogenesis) in e inas om P6 LysM WT
and LysMC e- u
(fl/fl)
. In P6 neona al mice, he diame e s o e inal
supe ficial ascula plexuses we e simila and no diffe ences in ei he
he numbe o b anching poin s o filopodia coun we e de ec ed be-
ween LysMC e- u
(fl/fl)
and LysM WT mice, indica ing ha u in ex-
p ession by myeloid cells does no ha e a majo influence on in i o
angiogenesis du ing neona al de elopmen (Fig. 2A–E). This finding is
in line wi h he abo e epo ed appea ance o u in a he la e s ages o
e inal ascula de elopmen (Fig. 1C).
2.4. Mice deficien o u in exp ession in myeloid cells show educed
hypoxic e ascula iza ion a e o he e ina
The ole o myeloid cell de i ed u in in hypoxia-d i en neo ascu-
la iza ion in he e ina was explo ed nex . Fi s , we de e mined whe he
eg ession o essels unde hype oxic condi ions in he OIR model is
compa able be ween LysMC e- u
(fl/fl)
and LysM WT mice. A e ex-
posu e o 75% oxygen be ween P7 and P12, e inas we e e alua ed a
P12. Typical o his model (Smi h e al., 1994; Uusi alo-Jä inen e al.,
2007; Vähä upa e al., 2016b), la ge a eas o he cen al ascula ne -
wo k we e eg essed wi h only a ew majo essels emaining cen ally
in bo h LysM WT and LysMC e- u
(fl/fl)
mice (Fig. 2F). Quan i a i e
analysis o aso-obli e a ed a eas in e ina confi med ha he e inal
ascula u e in LysMC e- u
(fl/fl)
and LysM WT mice was simila ly a -
ec ed by hype oxic exposu e (Fig. 2G). Taken oge he , hese da a
sugges ha dele ion o u in om myeloid cells has no a significan
effec on ascula eg ession in OIR model.
On e u n o no moxia, he a ascula cen al e ina becomes hy-
poxic and s imula es apid eg ow h o essels (Smi h e al., 1994;
Uusi alo-Jä inen e al., 2007). The a e o e inal e ascula iza ion in
LysM WT and LysMC e- u
(fl/fl)
e inas was de e mined by quan i ying
he a ascula e inal a ea 5 days a e he mice we e e u ned o no -
moxia. The e was a s a is ically significan diffe ence in he a ascula
e inal a ea be ween he LysM WT and LysMC e- u
(fl/fl)
mice a P17
showing ha he a e o e inal e ascula iza ion is subs an ially (30%)
educed in mice whe e u in is deple ed om myeloid cells (Fig. 2J). In
addi ion o e ascula iza ion o he e ina, he s ong hypoxic s imulus
om he cen e o he e ina also d i es abno mal misdi ec ed sp ou ing
o blood essels owa ds he i eous a he in e ace be ween he
cen ally obli e a ed and pe iphe ally pe used e ina (Smi h e al.,
1994; Uusi alo-Jä inen e al., 2007). This pa hological, p e e inal
neo ascula iza ion eaches i s maximum 5 days a e e u n o no -
moxia (a P17). The e was no s a is ically significan diffe ence in he
amoun o p e e inal neo ascula iza ion be ween LysM WT and
M. Vähä upa e al. Expe imen al Eye Resea ch 166 (2018) 160–167
161
(cap ion on nex page)
M. Vähä upa e al. Expe imen al Eye Resea ch 166 (2018) 160–167
162
LysMC e- u
(fl/fl)
e inas (Fig. 2K). The esul s indica e ha myeloid cell
exp essed u in has a ole in hypoxia-induced e ascula iza ion in e-
ina, bu does no influence he pa hological p e e inal neo ascula -
iza ion.
3. Discussion
The p esen s udy demons a es ha mac ophages associa ed wi h
e inal blood essels exp ess u in and he lack o u in in myeloid cells
delays hypoxia-d i en angiogenesis in e ina. I has p e iously been
shown ha he endo helial specificdeficiency o u in leads o emb y-
onal dea h due o ascula de ec s (Roeb oek e al., 1998), and he
cul u ed endo helial cells lacking u in canno g ow (Kim e al., 2012).
Ou esul s confi m an impo an ole o u in in angiogenesis as we
show o he fi s ime ha u in deficiency in myeloid cells leads o
impai ed angiogenesis in hypoxia-induced e inal angiogenesis.
P e ious s udies ha e shown ha esiden mac ophages, mic oglia,
a e needed o p ope angiogenesis in e ina du ing bo h de elopmen al
and hypoxia-induced angiogenesis (Checchin e al., 2006). In his s udy,
we demons a e ha myeloid-cell specific dele ion o p op o ein con-
e ase u in leads o he a enua ion o angiogenesis and educed
ascula iza ion a e in OIR model. Among u in's a ge p o eins a e
se e al p oangiogenic g ow h ac o s, including VEGF-C which is ex-
p essed in mac ophages and has a ole in con olling he b anching o
blood essels in he e ina (Sieg ied e al., 2003a; Tammela e al.,
2011). VEGF-A, in u n, does no equi e ac i a ing clea age by u in.
In e es ingly, a myeloid-cell specific abla ion o VEGF-A exp ession
does no change he VEGF le els in he OIR and does no ha e any
influence on angiogenesis in he OIR model (Liyanage e al., 2016).
Al hough u he s udies conce ning he ole o u in in e inal angio-
genesis a e equi ed, ou esul s sugges ha he exp ession o u in in
mac ophages may be ela ed o ac i a ion o p oangiogenic g ow h
ac o s by u in in he e ina. This is in line wi h p e ious s udies
showing simul aneous induc ion o VEGF-C and u in exp ession in
diffe en disease models (Kha ib e al., 2010; Lopez de Cicco e al.,
2004; Sieg ied e al., 2003a).
A majo unc ion o u in is o con ol he bioa ailabili y o an i-
inflamma o y TGF-β1(Pesu e al., 2008). As a ma e o ac , bo h u in
and TGF-βa e in ol ed in he egula ion o each o he 's ac i i y; u in is
needed o he ac i a ion o diffe en TGF-βiso o ms om inac i e
p ecu so molecules o ac i e, ma u e o ms (Pesu e al., 2008; Ven u a
e al., 2017). The ac i e TGF-β2, in u n, induces u in exp ession
(Ven u a e al., 2017). Thus, oge he hey gene a e a sel -sus aining
loop o high TGF-βac i i y (Ven u a e al., 2017). TGF-βsignaling is
associa ed wi h neo ascula iza ion in many diseases, including neo-
ascula ocula diseases (Amin e al., 1994; Bai e al., 2014; Wang e al.,
2017). The exp ession o TGF-βis ele a ed in he OIR model, sugges ing
ha TGF-βsignaling con ibu es o e inal e ascula iza ion
(Yingchuan e al., 2010). A p e ious s udy has shown ha he TGF-β1
bioac i i y is educed in mice deficien in u in exp ession in myeloid
cells (Co do a e al., 2016). Thus, ano he plausible explana ion o he
educ ion o e ascula iza ion in he e ina o LysMC e- u
(fl/fl)
mice
could be he educed bioa ailabili y o TGF-βdue o lack o ac i a ing
u in.
Al hough e inal e ascula iza ion a e and he o ma ion o pa-
hological p e e inal u s a e in e - ela ed in he OIR model, we
iden ified a delayed e ascula iza ion a e in e ina wi hou a sub-
sequen inc ease o pa hological p e e inal u o ma ion in LysMC e-
u
(fl/fl)
mice in he OIR model. One explana ion is ha esiden mac-
ophages, mic oglia, pe sis in he e ina in esponse o fi e-day long
hype oxia despi e blood essels disappea ing comple ely om e ina
(Da ies e al., 2006). Once he e ascula iza ion is ini ia ed upon e u n
o no moxia, i.e. induc ion o hypoxia in e ina, esiden mic oglial cells
espond o hypoxia by sec e ing p oangiogenic g ow h ac o s and di-
ec he e ascula iza ion, bu selec i ely only in e ina, whe e hey a e
loca ed. This no ion is suppo ed by he ac s ha he mic oglia a e
mainly loca ed in he a ascula a eas a e he hype oxia-pe iod and he
unc ion o mac ophage-de i ed VEGF-C is o con e he ip cells o
s alk cells du ing e inal angiogenesis (Tammela e al., 2011). The lack
o influence on p e e inal pa hological e ascula iza ion in he
LysMC e- u
(fl/fl)
mice is a he s iking because we obse ed sig-
nifican ly la ge a ascula a eas in LysMC e- u
(fl/fl)
mice han in WT
mice. This, in u n, should heo e ically induce mo e p onounced
compensa o y p e e inal pa hological u o ma ion, bu we could no
demons a e ha . An explana ion why la ge a ascula e inal a ea
does no ansla e in o enhanced p e e inal neo ascula iza ion, may be
impai ed p oangiogenic g ow h ac o ac i a ion in LysMC e- u
(fl/fl)
mice.
Taken oge he ou s udy demons a es ha he lack o u in in
myeloid cells delays hypoxia-d i en angiogenesis in e ina and im-
plica es u in exp essed ou side o he endo helial cells o he egula ion
o hypoxia-induced angiogenesis.
4. Me hods
4.1. Mice
Monocy e/Mac ophage-specific u in condi ional knockou
LysMC e- u
(fl/fl)
was gene a ed as desc ibed p e iously (Co do a e al.,
2016). B iefly, mice bea ing floxed u alleles we e backc ossed six
imes wi h C57BL/6 mice. LysMC e mice on C57BL/6 backg ound we e
pu chased om Taconic. LysMC e mice we e b ed wi h u
(fl/fl)
animals
o gene a e myeloid-specific u in knockou mice LysMC e- u
(fl/fl)
.
Mice we e housed unde pa hogen- ee s anda d condi ions, b ed and
he geno ype was de e mined by PCR. Mice we e ed wi h s anda d
labo a o y pelle s and wa e ad libi um. All animal expe imen s we e
pe o med acco ding o he ARVO s a emen o he use o animals in
oph halmic and ision esea ch in acco dance wi h p o ocols app o ed
by he Na ional Animal E hics Commi ee o Finland.
4.2. Oxygen-induced e inopa hy (OIR) model
The expe imen s on OIR model we e ca ied ou as desc ibed in
de ail p e iously (Smi h e al., 1994; S ahl e al., 2010b; Uusi alo-
Jä inen e al., 2007; Vähä upa e al., 2016b). B iefly, neona al mice a
P7 and hei nu sing mo he we e exposed o 75% oxygen o 5 days. A
P12, he mice we e e u ned o no mal oom ai . Animals we e eu-
hanized a P12 o assess he deg ee o ascula eg ession and a P17 o
de e mine he a e o e inal e ascula iza ion and p e e inal neo-
ascula iza ion. As pos na al weigh gain has been shown o affec
ou come in he OIR model, he pups included in he s udy we e weigh -
ma ched (S ahl e al., 2010a).
Fig. 1. Fu in is exp essed by he endo helial cells and mac ophages in e ina. Using exp ession da a om he FANTOM 5 p ojec , cDNA exp ession da a was ex ac ed o he p ima y
u in CAGE o ele an cell ypes (A). Exp ession da a o u in in diffe en e inal cell ypes was ex ac ed om p e iously pe o med mic oa ay exp ession analysis (B). In panels A–B
he cell ypes a e so ed by inc easing a e age exp ession om le o igh . Fu in exp ession om e ina was de e mined du ing de elopmen al angiogenesis a P4, P7 and P14 and in OIR
model a P14 and P17 om he e ascula ized e inas by IHC and IF using u in specific an ibody. Rep esen a i e images o u in exp ession du ing de elopmen (C) and in he OIR model
(D). A ows a e poin ing u in specific s aining a P17 OIR. Scale ba s ep esen s 100 μm. Rep esen a i e con ocal images showing CD31 posi i e endo helial cells ( ed) and u in (g een)
(E–F) and F4/80 posi i e mac ophages ( ed) and u in (g een) (G–H) in he e ina o ozen sec ions a e immunofluo escence s aining. Panels E and G a e showing s ainings a 20×
magnifica ion and panels F and H a 63× magnifica ion. A ows a e poin ing he endo helial cells o mac ophages ha a e exp essing u in. A owheads a e poin ing neo ascula u s.
GCL, ganglion cell laye ; IPL, inne plexi o m laye ; INL, inne nuclea laye ; OPL, ou e plexi o m laye ; ONL, ou e nuclea laye ; IS/OS, pho o ecep o inne /ou e segmen s; RPE,
e inal pigmen epi helium. Scale ba s ep esen s 100 μm in E and G and 20 μm in F and H.
M. Vähä upa e al. Expe imen al Eye Resea ch 166 (2018) 160–167
163
(cap ion on nex page)
M. Vähä upa e al. Expe imen al Eye Resea ch 166 (2018) 160–167
164

4.3. FANTOM analysis o e inal cell ypes
The FANTOM p ojec has pe o med exp ession analysis on 1839
samples om 573 p ima y cells, 152 issues, and 250 cell lines in
human. Specifically, he da a comes om cap analysis gene exp ession
(CAGE) sequencing o cDNA (FANTOM Conso ium e al., 2014). Ex-
p ession da a was ex ac ed o he p ima y u in CAGE o ele an cell
ypes: endo helial cells, pe icy es, as ocy es, e inal pigmen epi he-
lium cells, neu ons, neu ophils, endo helial p ogeni o cells, co neal
epi helial cells and monocy e de i ed mac ophages.
4.4. Mic oa ay analysis o e inal cell ypes
A mic oa ay exp ession analysis o mouse genes in a ious e inal
cell ype g oups was pe o med p e iously and is s o ed as accession E-
GEOD-33089 on he A ayExp ess da abase (h ps://www.ebi.ac.uk/
a ayexp ess/expe imen s/E-GEOD-33089). F om he da a we ex-
ac ed u in gene exp ession alues o 155 samples ac oss 7 cell ype
g oups: amac ine, cone, od, bipola , ho izon al, ganglion, and mic o-
glia (Siege e al., 2012). Bo h FANTOM and mic oa ay analyses we e
pe o med u ilizing supe compu e esou ces p o ided by CSC–IT
Cen e o Science o he Finnish Minis y o Educa ion and Cul u e and
he aw da a was p ocessed as p e iously desc ibed in de ail elsewhe e
(Ba ke e al., 2017).
4.5. Immunohis ochemis y (IHC) and isolec in GS-IB
4
s aining
Fo immunohis ochemis y, he eyes we e fixed wi h 4% PFA and
embedded in pa affin ( o IHC), o eshly ozen in OCT embedding
compound in liquid ni ogen cooled isopen ane and la e fixed wi h
me hanol ( o immunofluo escence). The IHC s ainings we e ca ied
ou on 4–6μm hick issue sec ions using he ollowing p ima y an i-
bodies: abbi an i- u in, (H-220), (San a C uz Bio echnology, Dallas,
TX), a an i-CD31 (BD Pha mingen, San Diego, CA) and a an i-F4/80
(Li e Technologies, Paisley, UK) ollowed by ho se adish pe oxidase
(HRP) o fluo escein-conjuga ed seconda y an ibodies. Hema oxylin
s aining was used as a coun e s ain. IF samples we e moun ed wi h
Vec ashield moun ing medium wi h DAPI (Vec o Labo a o ies,
Bu lingame, CA) and images we e aken wi h con ocal mic oscope (Ca l
Zeiss LSM 700). As a nega i e con ol, each s aining included sec ions
s ained wi hou p ima y an ibody.
4.6. Quan i a i e analysis o angiogenesis
Fo he analysis o e inal ascula u e, eyes we e enuclea ed, fixed
wi h 4% PFA and e inas dissec ed. Fla moun e inas we e blocked in
10% no mal goa se um o 2 h, incuba ed o e nigh wi h Isolec in GS-
IB
4
(1:200, In i ogen, Ca lsbad, CA) Re inas we e imaged ia con ocal
mic oscope (Ca l Zeiss LSM 700) and he a e o angiogenesis was de-
e mined du ing de elopmen (P6) and in he OIR model as p e iously
desc ibed (Conno e al., 2009; S ahl e al., 2010b). B iefly, e inas we e
imaged using con ocal mic oscopy (Ca l Zeiss LSM 700) wi h 10 × ob-
jec i e by ocusing on he p e e inal neo ascula u s and he unde -
lying supe ficial ascula plexus. A eas o ascula obli e a ion and
pa hological neo ascula iza ion (neo ascula u s) we e compu ed, in
pixels, and di ided by he o al e inal a ea using Adobe Pho oshop
CS3. The a e o de elopmen al angiogenesis a P6 was de e mined by
measu ing he diame e o ascula u e ia he op ic ne e o he ips o
he blood essels. Analysis o essel b anching and numbe o filopodia
sp ou s we e quan ified as p e iously desc ibed (Lobo e al., 2007).
Each poin whe e h ee capilla y segmen s me was coun ed as one
junc ion. B anch poin s om he capilla y plexus om wo a eas
(370 μm × 550 μm) pe e ina we e coun ed and esul s a e shown by
he a e age coun pe uni a ea. The numbe o filopodia p o usions
om he ip cells we e coun ed om he leng h o 500 μm o he
sp ou ing ascula on ( wo measu es pe e ina).
4.7. S a is ical analysis
S uden 's - es was conduc ed o no mally dis ibu ed da a and
nonpa ame ic Mann-Whi ney U es (G aphPad P ism 6.01 and IBM
SPSS s a is ics) o non-no mally dis ibu ed da a o es he s a is ical
significance o he esul s. P- alues less han 0.05 we e conside ed
s a is ically significan .
5. S a emen o au ho con ibu ions
M.V, T.J and H. U-J designed he esea ch. M.V and H.B. pe o med
he esea ch. M.V, H.B, T.J and H. U-J analyzed he da a. M.P, S.A and
Z.M.C p o ided LysMC e- u
(fl/fl)
mice o he s udy. M.V con ibu ed
he geno yped mice li e ma es. M.V, Z.M.C, H.B, T.J and H. U-J w o e
he manusc ip . M.V made he figu es. All au ho s e iewed he pape .
Conflic o in e es s a emen
The au ho s decla e no conflic o in e es .
Acknowledgemen s
We hank Ma ianne Ka lsbe g o excellen echnical assis ance. The
wo k was suppo ed by he Sig id Juselius Founda ion, he Academy o
Finland, Päi ikki and Saka i Sohlbe g Founda ion, Ins umen a ium
Resea ch Founda ion, Finnish Medical Founda ion, Pi kanmaa Hospi al
Dis ic Resea ch Founda ion and he Finnish Cul u al Founda ion,
Finnish Diabe ic Resea ch Founda ion, Finnish Eye Founda ion.
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4
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Rep esen a i e OIR model e inas o WT and LysMC e- u (
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fl/fl
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p e e inal u s (K). (WT n = 26 and KO n = 19 e inas.) Scale ba ep esen s 1 mm in A, F, H and I and 200 μm in C. E o ba s ep esen SDs.
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Blumen hal, A., Bodega, B., Bone i, A., B iggs, J., B ombache , F., Bu oughs, A.M.,
Cali ano, A., Cannis aci, C.V., Ca bajo, D., Chen, Y., Chie ici, M., Ciani, Y., Cle e s,
H.C., Dalla, E., Da is, C.A., De ma , M., Diehl, A.D., Dohi, T., D ablos, F., Edge, A.S.,
Edinge , M., Ekwall, K., Endoh, M., Enomo o, H., Fagiolini, M., Fai bai n, L., Fang,
H., Fa ach-Ca son, M.C., Faulkne , G.J., Fa o o , A.V., Fishe , M.E., F i h, M.C.,
Fuji a, R., Fukuda, S., Fu lanello, C., Fu ino, M., Fu usawa, J., Geij enbeek, T.B.,
Gibson, A.P., Ginge as, T., Goldowi z, D., Gough, J., Guhl, S., Gule , R., Gus incich,
S., Ha, T.J., Hamaguchi, M., Ha a, M., Ha be s, M., Ha shba ge , J., Hasegawa, A.,
Hasegawa, Y., Hashimo o, T., He lyn, M., Hi chens, K.J., Ho Sui, S.J., Ho mann, O.M.,
Hoo , I., Ho i, F., Huminiecki, L., Iida, K., Ikawa, T., Janko ic, B.R., Jia, H., Joshi, A.,
Ju man, G., Kaczkowski, B., Kai, C., Kaida, K., Kaiho, A., Kajiyama, K., Kanamo i-
Ka ayama, M., Kasiano , A.S., Kasukawa, T., Ka ayama, S., Ka o, S., Kawaguchi, S.,
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Kondo, N., Koseki, H., Koyasu, S., K ampi z, S., Kubosaki, A., Kwon, A.T., La os, J.F.,
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