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Synthesis of a New β-Galactosidase Inhibitor Displaying Pharmacological Chaperone Properties for GM1 Gangliosidosis

Abstract

GM1 gangliosidosis is a rare lysosomal disease caused by the deficiency of the enzyme β-galactosidase (β-Gal; GLB1; E.C. 3.2.1.23), responsible for the hydrolysis of terminal β-galactosyl residues from GM1 ganglioside, glycoproteins, and glycosaminoglycans, such as keratan-sulfate. With the aim of identifying new pharmacological chaperones for GM1 gangliosidosis, the synthesis of five new trihydroxypiperidine iminosugars is reported in this work. The target compounds feature a pentyl alkyl chain in different positions of the piperidine ring and different absolute configurations of the alkyl chain at C-2 and the hydroxy group at C-3. The organometallic addition of a Grignard reagent onto a carbohydrate-derived nitrone in the presence or absence of a suitable Lewis Acid was exploited, providing structural diversity at C-2, followed by the ring-closure reductive amination step. An oxidation-reduction process allowed access to a different configuration at C-3. The N-pentyl trihydroxypiperidine iminosugar was also synthesized for the purpose of comparison. The biological evaluation of the newly synthesized compounds was performed on leucocyte extracts from healthy donors and identified two suitable β-Gal inhibitors, namely compounds 10 and 12. Among these, compound 12 showed chaperoning properties since it enhanced β-Gal activity by 40% when tested on GM1 patients bearing the p.Ile51Asn/p.Arg201His mutations.

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Synthesis of a New β-Galactosidase Inhibitor Displaying Pharmacological Chaperone Properties for GM1 Gangliosidosis

Author: Clemente, Francesca; Martínez Bailén, Macarena; Matassini, Camilla; Morrone, Amelia; Falliano, Silvia; Caciotti, Anna; Paoli, Paolo; Goti, Andrea; Cardona, Francesca
Publisher: MDPI
Year: 2022
DOI: 10.3390/molecules27134008
Source: https://idus.us.es/bitstreams/deed16ca-6552-4017-860a-6964c2d26364/download
Ci a ion: Clemen e, F.;
Ma ínez-Bailén, M.; Ma assini, C.;
Mo one, A.; Falliano, S.; Cacio i, A.;
Paoli, P.; Go i, A.; Ca dona, F.
Syn hesis o a New β-Galac osidase
Inhibi o Displaying Pha macological
Chape one P ope ies o GM1
Gangliosidosis. Molecules 2022,27,
4008. h ps://doi.o g/10.3390/
molecules27134008
Academic Edi o : Ramón J. Es é ez
Cabanas
Recei ed: 1 June 2022
Accep ed: 17 June 2022
Published: 22 June 2022
Publishe ’s No e: MDPI s ays neu al
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Licensee MDPI, Basel, Swi ze land.
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A ibu ion (CC BY) license (h ps://
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4.0/).
molecules
A icle
Syn hesis o a New β-Galac osidase Inhibi o Displaying
Pha macological Chape one P ope ies o GM1 Gangliosidosis
F ancesca Clemen e 1,* , Maca ena Ma ínez-Bailén1,2, Camilla Ma assini 1, Amelia Mo one 3,4 ,
Sil ia Falliano 4, Anna Cacio i 4, Paolo Paoli 5, And ea Go i 1and F ancesca Ca dona 1,*
1Dipa imen o di Chimica “Ugo Schi ” (DICUS), Uni e si àdi Fi enze, Via Della Las uccia 3-13,
50019 Ses o Fio en ino, I aly; maca [email p o ec ed] (M.M.-B.); [email p o ec ed] (C.M.);
[email p o ec ed] (A.G.)
2Glycosys ems Labo a o y, Ins i u o de In es igaciones Químicas (IIQ), CSIC—Uni e sidad de Se illa,
A . Amé ico Vespucio 49, 41092 Se illa, Spain
3Depa men o Neu osciences, Pha macology and Child Heal h (NEUROFARBA), Uni e si y o Flo ence,
Viale Pie accini n. 24, 50139 Fi enze, I aly; amelia.mo [email p o ec ed]
4Labo a o y o Molecula Biology o Neu ome abolic Diseases, Neu oscience Depa men ,
Meye Child en’s Hospi al, Viale Pie accini n. 24, 50139 Fi enze, I aly; sil ia. alliano@meye .i (S.F.);
anna.cacio i@meye .i (A.C.)
5Dipa imen o di Scienze Biomediche Spe imen ali e Cliniche “Ma io Se io” (DSBSC), Uni e si y o Flo ence,
Viale Mo gagni 50, 50134 Flo ence, I aly; [email p o ec ed]
*Co espondence: [email p o ec ed] (F.C.); [email p o ec ed] (F.C.);
Tel.: +39-055-4573453 (F.C.); +39-055-4573504 (F.C.)
Abs ac :
GM1 gangliosidosis is a a e lysosomal disease caused by he de iciency o he enzyme
β
-galac osidase (
β
-Gal; GLB1; E.C. 3.2.1.23), esponsible o he hyd olysis o e minal
β
-galac osyl
esidues om GM1 ganglioside, glycop o eins, and glycosaminoglycans, such as ke a an-sul a e.
Wi h he aim o iden i ying new pha macological chape ones o GM1 gangliosidosis, he syn hesis
o i e new ihyd oxypipe idine iminosuga s is epo ed in his wo k. The a ge compounds ea u e
a pen yl alkyl chain in di e en posi ions o he pipe idine ing and di e en absolu e con igu a ions
o he alkyl chain a C-2 and he hyd oxy g oup a C-3. The o ganome allic addi ion o a G igna d
eagen on o a ca bohyd a e-de i ed ni one in he p esence o absence o a sui able Lewis Acid was
exploi ed, p o iding s uc u al di e si y a C-2, ollowed by he ing-closu e educ i e amina ion
s ep. An oxida ion- educ ion p ocess allowed access o a di e en con igu a ion a C-3. The N-pen yl
ihyd oxypipe idine iminosuga was also syn hesized o he pu pose o compa ison. The biological
e alua ion o he newly syn hesized compounds was pe o med on leucocy e ex ac s om heal hy
dono s and iden i ied wo sui able
β
-Gal inhibi o s, namely compounds
10
and
12
. Among hese,
compound
12
showed chape oning p ope ies since i enhanced
β
-Gal ac i i y by 40% when es ed
on GM1 pa ien s bea ing he p.Ile51Asn/p.A g201His mu a ions.
Keywo ds:
iminosuga s;
β
-galac osidase inhibi o s; GM1 gangliosidosis; GLB1; pha macological
chape ones; ni ones; G igna d eagen s; educ i e amina ion
1. In oduc ion
GM1 gangliosidosis (MIM# 230500) is a lysosomal s o age diso de (LSD) caused by
he de iciency o lysosomal
β
-galac osidase (
β
-Gal; GLB1; E.C. 3.2.1.23), an enzyme depu ed
o he hyd olysis o he e minal
β
-galac osyl esidues om GM1 ganglioside, glycop o-
eins, and glycosaminoglycans, such as ke a an-sul a e [
1
]. GM1 gangliosidosis is consid-
e ed a neu odegene a i e diso de classi ied in o h ee clinical sub ypes: se e e in an ile
(
ype I; OMIM #230500
), la e-in an ile/ju enile ( ype II; OMIM #230600), and milde adul
( ype III; OMIM #230650) o ms [
2
]. The se e e in an ile o m ( ype I) is a al by 1–2 yea s
old and associa ed wi h se e e p og essi e neu ological symp oms ha mani es du ing
ea ly in ancy. Pa ien s wi h he ju enile o m ( ype II) mani es i s symp oms a 2–3 yea s,
Molecules 2022,27, 4008. h ps://doi.o g/10.3390/molecules27134008 h ps://www.mdpi.com/jou nal/molecules
Molecules 2022,27, 4008 2 o 21
show he slowe p og ession o he disease and ha e a ela i ely highe li e expec ancy (la e
childhood o ea ly adolescence). Type III GM1 gangliosidosis is he mildes o m, wi h la e
onse o symp oms (ea ly o mid-adolescence) and highe li e expec ancy. The es ima ed
incidence o GM1 gangliosidosis is in he ange o
1:100.000–200.000
li e bi hs [
2
,
3
], wi h
some isola ed communi ies being pa icula ly a ec ed (e.g., Mal a, 1:3.700) [4].
A p esen , he e is no cu e a ailable o GM1 gangliosidosis. Symp oma ic ea -
men s o some o he neu ologic symp oms a e a ailable bu do no signi ican ly al e he
condi ion’s p og ession [
2
]. The apies elying on pha macological chape ones (PCs) may
cons i u e a u u e op ion o he ea men o his disease. PCs a e e e sible inhibi o s
o he enzyme used in sub-inhibi o y amoun s, which in e ac wi h he mu a ed p o ein,
a o ing i s p ope con o ma ion, imp o ing i s s abili y in he endoplasmic e iculum,
p e en ing i s agg ega ion and p ema u e deg ada ion, hus esul ing in he escue o
enzyma ic ac i i y [
5
–
9
]. In he pas wen y yea s, se e al glycomime ic small molecules
ha e been in es iga ed as PCs o GM1 gangliosidosis, such as 1-deoxygalac onoji imycin
(DGJ (
1
); Figu e 1) [
10
,
11
]. This compound was la e app o ed o Fab y Disease, ano he
LSD, unde he ade name o Gala oldTM [12].
Molecules 2022, 27, x FOR PEER REVIEW 2 o 21
by 1–2 yea s old and associa ed wi h se e e p og essi e neu ological symp oms ha
mani es du ing ea ly in ancy. Pa ien s wi h he ju enile o m ( ype II) mani es i s
symp oms a 2–3 yea s, show he slowe p og ession o he disease and ha e a ela i ely
highe li e expec ancy (la e childhood o ea ly adolescence). Type III GM1 gangliosidosis
is he mildes o m, wi h la e onse o symp oms (ea ly o mid-adolescence) and highe
li e expec ancy. The es ima ed incidence o GM1 gangliosidosis is in he ange o
1:100.000–200.000 li e bi hs [2,3], wi h some isola ed communi ies being pa icula ly
a ec ed (e.g., Mal a, 1:3.700) [4].
A p esen , he e is no cu e a ailable o GM1 gangliosidosis. Symp oma ic
ea men s o some o he neu ologic symp oms a e a ailable bu do no signi ican ly
al e he condi ion's p og ession [2]. The apies elying on pha macological chape ones
(PCs) may cons i u e a u u e op ion o he ea men o his disease. PCs a e e e sible
inhibi o s o he enzyme used in sub-inhibi o y amoun s, which in e ac wi h he mu a ed
p o ein, a o ing i s p ope con o ma ion, imp o ing i s s abili y in he endoplasmic
e iculum, p e en ing i s agg ega ion and p ema u e deg ada ion, hus esul ing in he
escue o enzyma ic ac i i y [5–9]. In he pas wen y yea s, se e al glycomime ic small
molecules ha e been in es iga ed as PCs o GM1 gangliosidosis, such as 1-
deoxygalac onoji imycin (DGJ (1); Figu e 1) [10,11]. This compound was la e app o ed
o Fab y Disease, ano he LSD, unde he ade name o Gala oldTM [12].
Figu e 1. S uc u es o some imino- and azasuga s inhibi o s and chape ones o β-Gal.
The abili y o 1 o escue he ac i i y o mu an β-Gal up o 7- old in human ib oblas s
om pa ien s wi h GM1 gangliosidosis was demons a ed in 2001 [13]. Since hen, g ea
syn he ic e o s ha e iden i ied mo e po en PCs owa ds GM1 gangliosidosis (Figu e 1)
[11]. Se e al N-alkyla ed DGJ de i a i es we e syn hesized wi h enhanced speci ici y and
a ini y o galac osidases, such as N-bu yl-DGJ (NB-DGJ (2); Figu e 1) and N-nonyl-DGJ
(NN-DGJ (3); Figu e 1) [13,14]. The bicyclic sp2-iminosuga iso hiou ea de i a i e 6S-NBI-
DGJ (5N,6S-[N’-bu yliminome hylidene)-6- hio-1-deoxygalac onoji imycin (4); Figu e 1)
esul ed in a six old β-Gal ac i i y enhancemen in he ib oblas s om pa ien s
homozygous o he ju enile GM1 mu a ion p.A g201Cys [9,15,16] and showed p omising
p ope ies as PC in a GM1 gangliosidosis mouse model [17]. A signi ican con ibu ion
was also p o ided by he G az g oup, s a ing wi h he compound coined as DLHEX-DGJ
(5), which showed signi ican ac i i y enhancemen (18- old) wi h chape one-sensi i e
p.A g201Cys and p.A g201His cell lines a 500 µM [18]. In addi ion, se e al C-alkyla ed
azasuga s (C-pen yl-4-epi-iso agomine 6 and i s nonyl analogous 7, Figu e 1) we e ound
o be po en and selec i e inhibi o s o human lysosomal β-Gal able o he hal -maximal
eco e y o β-Gal ac i i y. Howe e , compound 7 also s ongly inhibi ed lysosomal β-
glucosidase, which may cause undesi able side e ec s [19,20]. Mo eo e , he “all-cis”
ihyd oxypipe idines 8 and 9 (Figu e 1) we e sui able inhibi o s o lysosomal β-Gal and
Figu e 1. S uc u es o some imino- and azasuga s inhibi o s and chape ones o β-Gal.
The abili y o
1
o escue he ac i i y o mu an
β
-Gal up o 7- old in human i-
b oblas s om pa ien s wi h GM1 gangliosidosis was demons a ed in 2001 [
13
]. Since
hen, g ea syn he ic e o s ha e iden i ied mo e po en PCs owa ds GM1 gangliosido-
sis (
Figu e 1
) [
11
]. Se e al N-alkyla ed DGJ de i a i es we e syn hesized wi h enhanced
speci ici y and a ini y o galac osidases, such as N-bu yl-DGJ (NB-DGJ (
2
); Figu e 1) and N-
nonyl-DGJ
(NN-DGJ (3)
; Figu e 1) [
13
,
14
]. The bicyclic sp
2
-iminosuga iso hiou ea de i a-
i e 6S-NBI-DGJ (5N,6S-[N
0
-bu yliminome hylidene)-6- hio-1-deoxygalac onoji imycin (
4
);
Figu e 1) esul ed in a six old
β
-Gal ac i i y enhancemen in he ib oblas s om pa-
ien s homozygous o he ju enile GM1 mu a ion p.A g201Cys [
9
,
15
,
16
] and showed
p omising p ope ies as PC in a GM1 gangliosidosis mouse model [
17
]. A signi ican
con ibu ion was also p o ided by he G az g oup, s a ing wi h he compound coined as
DLHEX-DGJ (5)
, which showed signi ican ac i i y enhancemen (18- old) wi h chape one-
sensi i e p.A g201Cys and p.A g201His cell lines a 500
µ
M [
18
]. In addi ion, se e al
C-alkyla ed azasuga s (C-pen yl-4-epi-iso agomine
6
and i s nonyl analogous
7
, Figu e 1)
we e ound o be po en and selec i e inhibi o s o human lysosomal
β
-Gal able o he
hal -maximal eco e y o
β
-Gal ac i i y. Howe e , compound
7
also s ongly inhibi ed
lysosomal
β
-glucosidase, which may cause undesi able side e ec s [
19
,
20
]. Mo eo e ,
he “all-cis”
ihyd oxypipe idines 8
and
9
(Figu e 1) we e sui able inhibi o s o lysosomal
β
-Gal and we e able o inc ease
β
-Gal ac i i y in GM1 gangliosidosis pa ien ib oblas s up
o wo–six old (a <100 µM concen a ion) [21].
Based on he obse a ion ha he con igu a ion o he ca bon a oms bea ing he
hyd oxy g oups and he posi ion o he alkyl chain play a sub le ole in he biological
Molecules 2022,27, 4008 3 o 21
ac i i y o
β
-Gal, he s aigh o wa d s e eoselec i e syn hesis o ou no el C-2 pen yl
ihyd oxypipe idines
10
,
11
,
12
and
13
(Scheme 1) was unde aken. The new compounds
a e C-2 alkyla ed ihyd oxypipe idines wi h wo di e en s e eochemical pa e ns a he
hyd oxy g oups and he opposi e absolu e con igu a ion a C-2. The choice o a pen yl
alkyl chain (ins ead o a longe one) was made o a oid undesi able side e ec s due o
lysosomal β-glucosidase inhibi ion [22,23].
Molecules 2022, 27, x FOR PEER REVIEW 3 o 21
we e able o inc ease β-Gal ac i i y in GM1 gangliosidosis pa ien ib oblas s up o wo–
six old (a <100 µM concen a ion) [21].
Based on he obse a ion ha he con igu a ion o he ca bon a oms bea ing he
hyd oxy g oups and he posi ion o he alkyl chain play a sub le ole in he biological
ac i i y o β-Gal, he s aigh o wa d s e eoselec i e syn hesis o ou no el C-2 pen yl
ihyd oxypipe idines 10, 11, 12 and 13 (Scheme 1) was unde aken. The new compounds
a e C-2 alkyla ed ihyd oxypipe idines wi h wo di e en s e eochemical pa e ns a he
hyd oxy g oups and he opposi e absolu e con igu a ion a C-2. The choice o a pen yl
alkyl chain (ins ead o a longe one) was made o a oid undesi able side e ec s due o
lysosomal β-glucosidase inhibi ion [22,23].
Scheme 1. Re osyn he ic s e eodi e gen s a egy o yield C-2 pen yl ihyd oxypipe idines 10, 11,
12 and 13, s a ing om he wo common in e media es 14 and 15, in u n, ob ained om D-
mannose-de i ed ni one 18.
The a ge compounds we e ob ained s a ing om wo common in e media es 14
and 15, which could a o d, espec i ely, bo h he ihyd oxypipe idines 10 and 12
h ough simple O- and N-dep o ec ion, and he “all-cis” ihyd oxypipe idines 11 and 13,
epime ic a C-3, h ough an oxida ion- educ ion sequence a e empo a y ni ogen
p o ec ion. The pipe idine in e media es 14 and 15 could be ob ained ia in amolecula
educ i e amina ion (RA) [24] o hyd oxylamines 16 and 17 wi h an S o R absolu e
con igu a ion a he newly o med s e eocen e , in u n, de i ed om G igna d eagen
addi ions on o ni one 18 in he p esence o absence o a sui able Lewis Acid (Scheme 1).
Ni one 18 was eadily accessed om 19 wi h an 85% yield by eac ion wi h N-benzyl
hyd oxylamine in d y CH2Cl2 [25]. Aldehyde 19 was syn hesized in ou s eps om D-
mannose on a g am scale [26]. To con i m he ole o he chain posi ion on ac i i y,
compound 21 was syn hesized s a ing om he pipe idine in e media e 20 h ough N-
Alkyla ion. The pipe idine in e media e 20 was ob ained om 18 by RA [23].
In his wo k, he syn hesis o he a ge compounds 10–13 and 21 is desc ibed,
oge he wi h he biological e alua ion o hei e ec on he human lysosomal β-Gal
enzyme and an in i o s udy on ib oblas cell lines bea ing he p.Ile51Asn/p.A g201His
and he p.A g201His/Ty 83Leu sX8 mu a ions om ju enile GM1 gangliosidosis pa ien s.
Scheme 1.
Re osyn he ic s e eodi e gen s a egy o yield C-2 pen yl ihyd oxypipe idines
10,11,12 and 13
, s a ing om he wo common in e media es
14
and
15
, in u n, ob ained om
D-mannose-de i ed ni one 18.
The a ge compounds we e ob ained s a ing om wo common in e media es
14
and
15
, which could a o d, espec i ely, bo h he ihyd oxypipe idines
10
and
12
h ough
simple O- and N-dep o ec ion, and he “all-cis” ihyd oxypipe idines
11
and
13
, epime ic
a C-3, h ough an oxida ion- educ ion sequence a e empo a y ni ogen p o ec ion.
The pipe idine in e media es
14
and
15
could be ob ained ia in amolecula educ i e
amina ion (RA) [
24
] o hyd oxylamines
16
and
17
wi h an So Rabsolu e con igu a ion
a he newly o med s e eocen e , in u n, de i ed om G igna d eagen addi ions on o
ni one
18
in he p esence o absence o a sui able Lewis Acid (Scheme 1). Ni one
18
was
eadily accessed om
19
wi h an 85% yield by eac ion wi h N-benzyl hyd oxylamine
in d y CH
2
Cl
2
[
25
]. Aldehyde
19
was syn hesized in ou s eps om D-mannose on
a g am scale [
26
]. To con i m he ole o he chain posi ion on ac i i y, compound
21
was syn hesized s a ing om he pipe idine in e media e
20
h ough N-Alkyla ion. The
pipe idine in e media e 20 was ob ained om 18 by RA [23].
In his wo k, he syn hesis o he a ge compounds
10–13
and
21
is desc ibed, oge he
wi h he biological e alua ion o hei e ec on he human lysosomal
β
-Gal enzyme and
an
in i o
s udy on ib oblas cell lines bea ing he p.Ile51Asn/p.A g201His and he
p.A g201His/Ty 83Leu sX8 mu a ions om ju enile GM1 gangliosidosis pa ien s.
2. Resul s and Discussion
2.1. Chemis y: Syn hesis and S uc u al Assignmen
The addi ion o pen ylmagnesium b omide o ni one
18
in d y THF a
−
78
◦
C o
3 h a o ded a good yield (70%, en y 1, Table 1) o he co esponding hyd oxylamines
16
and
17
in a 3.5:1 a io in a o o he hyd oxylamine
16
wi h he (S) absolu e con igu-
Molecules 2022,27, 4008 4 o 21
a ion a he newly o med s e eocen e . The addi ion o he same G igna d eagen in
he p esence o BF
3·
E
2
O (1.0 equi .) esul ed in a e e sal o s e eoselec i i y, and he
hyd oxylamine
17
wi h an (R) absolu e con igu a ion a he newly o med s e eocen e
was o med wi h a
d = 5.0:1
(en y 2, Table 1). In keeping wi h he indings o p e ious
expe imen s wi h di e en G igna d eagen s, he wo hyd oxylamines
16
and
17,
which
we e eadily sepa able by lash column ch oma og aphy, we e no s able in ai and spon-
aneously pa ially oxidized o he co esponding ni ones
22
and
23
(Scheme 2) [
22
,
23
].
Thei o ma ion was a es ed by
1
H-NMR and MS analyses immedia ely a e pu i ica ion
by column ch oma og aphy; comple e cha ac e iza ion was ca ied ou a e oxida ion o
he hyd oxylamines
16
and
17
o ni ones
22
and
23
wi h he hype alen iodine eagen
IBX in d y CH2Cl2(Scheme 2) [27].
Table 1. Addi ion o pen yl magnesium b omide o ni one 18.
Molecules 2022, 27, x FOR PEER REVIEW 4 o 21
2. Resul s and Discussion
2.1. Chemis y: Syn hesis and S uc u al Assignmen
The addi ion o pen ylmagnesium b omide o ni one 18 in d y THF a −78 °C o 3 h
a o ded a good yield (70%, en y 1, Table 1) o he co esponding hyd oxylamines 16 and
17 in a 3.5:1 a io in a o o he hyd oxylamine 16 wi h he (S) absolu e con igu a ion a
he newly o med s e eocen e . The addi ion o he same G igna d eagen in he p esence
o BF3·E 2O (1.0 equi .) esul ed in a e e sal o s e eoselec i i y, and he hyd oxylamine
17 wi h an (R) absolu e con igu a ion a he newly o med s e eocen e was o med wi h
a d = 5.0:1 (en y 2, Table 1). In keeping wi h he indings o p e ious expe imen s wi h
di e en G igna d eagen s, he wo hyd oxylamines 16 and 17, which we e eadily sep-
a able by lash column ch oma og aphy, we e no s able in ai and spon aneously pa -
ially oxidized o he co esponding ni ones 22 and 23 (Scheme 2) [22,23]. Thei o ma ion
was a es ed by 1H-NMR and MS analyses immedia ely a e pu i ica ion by column ch o-
ma og aphy; comple e cha ac e iza ion was ca ied ou a e oxida ion o he hyd oxyla-
mines 16 and 17 o ni ones 22 and 23 wi h he hype alen iodine eagen IBX in d y
CH2Cl2 (Scheme 2) [27].
Table 1. Addi ion o pen yl magnesium b omide o ni one 18.
En y C5H11MgB
Equi .
Lewis Acid
(1 Equi .)
Temp
(°C)
Time
(h)
16:17
Ra io a Yield b
1 1.8 none −78 3 3.5:1 70%
2 1.8 BF3·E 2O −30 2 1:5 75%
a De e mined by he in eg a ion o signals in he 1H-NMR spec a o he c ude eac ion mix u e. b
De e mined based on he o al amoun o R and S adduc s eco e ed a e pu i ica ion by column
ch oma og aphy.
Scheme 2. Oxida ion o hyd oxylamines 16 and 17 wi h IBX: syn hesis o ni ones 22 and 23.
The hyd oxylamine/ni one mix u es we e employed in he ing-closu e RA s ep
wi h H2 as a educing agen (balloon), Pd/C as a ca alys and wo equi alen s o ace ic acid
in MeOH, a o ding he pipe idines 14 and 15, (S)- and (R)-con igu ed a C-2, espec i ely,
En y C5H11MgB
Equi .
Lewis
Acid
(1 Equi .)
Temp
(◦C)
Time
(h)
16:17
Ra io aYield b
1 1.8 none −78 3 3.5:1 70%
2 1.8 BF3·E 2O−30 2 1:5 75%
a
De e mined by he in eg a ion o signals in he
1
H-NMR spec a o he c ude eac ion mix u e.
b
De e mined
based on he o al amoun o Rand Sadduc s eco e ed a e pu i ica ion by column ch oma og aphy.
Molecules 2022, 27, x FOR PEER REVIEW 4 o 21
2. Resul s and Discussion
2.1. Chemis y: Syn hesis and S uc u al Assignmen
The addi ion o pen ylmagnesium b omide o ni one 18 in d y THF a −78 °C o 3 h
a o ded a good yield (70%, en y 1, Table 1) o he co esponding hyd oxylamines 16 and
17 in a 3.5:1 a io in a o o he hyd oxylamine 16 wi h he (S) absolu e con igu a ion a
he newly o med s e eocen e . The addi ion o he same G igna d eagen in he p esence
o BF3·E 2O (1.0 equi .) esul ed in a e e sal o s e eoselec i i y, and he hyd oxylamine
17 wi h an (R) absolu e con igu a ion a he newly o med s e eocen e was o med wi h
a d = 5.0:1 (en y 2, Table 1). In keeping wi h he indings o p e ious expe imen s wi h
di e en G igna d eagen s, he wo hyd oxylamines 16 and 17, which we e eadily sep-
a able by lash column ch oma og aphy, we e no s able in ai and spon aneously pa -
ially oxidized o he co esponding ni ones 22 and 23 (Scheme 2) [22,23]. Thei o ma ion
was a es ed by 1H-NMR and MS analyses immedia ely a e pu i ica ion by column ch o-
ma og aphy; comple e cha ac e iza ion was ca ied ou a e oxida ion o he hyd oxyla-
mines 16 and 17 o ni ones 22 and 23 wi h he hype alen iodine eagen IBX in d y
CH2Cl2 (Scheme 2) [27].
Table 1. Addi ion o pen yl magnesium b omide o ni one 18.
En y C5H11MgB
Equi .
Lewis Acid
(1 Equi .)
Temp
(°C)
Time
(h)
16:17
Ra io a Yield b
1 1.8 none −78 3 3.5:1 70%
2 1.8 BF3·E 2O −30 2 1:5 75%
a De e mined by he in eg a ion o signals in he 1H-NMR spec a o he c ude eac ion mix u e. b
De e mined based on he o al amoun o R and S adduc s eco e ed a e pu i ica ion by column
ch oma og aphy.
Scheme 2. Oxida ion o hyd oxylamines 16 and 17 wi h IBX: syn hesis o ni ones 22 and 23.
The hyd oxylamine/ni one mix u es we e employed in he ing-closu e RA s ep
wi h H2 as a educing agen (balloon), Pd/C as a ca alys and wo equi alen s o ace ic acid
in MeOH, a o ding he pipe idines 14 and 15, (S)- and (R)-con igu ed a C-2, espec i ely,
Scheme 2. Oxida ion o hyd oxylamines 16 and 17 wi h IBX: syn hesis o ni ones 22 and 23.
The hyd oxylamine/ni one mix u es we e employed in he ing-closu e RA s ep
wi h H
2
as a educing agen (balloon), Pd/C as a ca alys and wo equi alen s o ace ic
acid in MeOH, a o ding he pipe idines
14
and
15
, (S)- and (R)-con igu ed a C-2, espec-
i ely, in 2 days and excellen yields a e ea men wi h a s ongly basic anion exchange
esin (Scheme 3).
Molecules 2022,27, 4008 5 o 21
Molecules 2022, 27, x FOR PEER REVIEW 5 o 21
in 2 days and excellen yields a e ea men wi h a s ongly basic anion exchange esin
(Scheme 3).
Scheme 3. The ing-closu e educ i e amina ion sequence.
Ca e ul analysis o he 1H-NMR, 2D-NMR and 1D-NOESY spec a ca ied ou on pi-
pe idines 14 and 15 con i med he s e eochemical ou come o he G igna d addi ion. The
1H-NMR signals o he azasuga po ion o pipe idines 14 and 15, oge he wi h hei
coupling cons an s, a e shown in Figu e 2. Fo compound 14, 1D-NOESY spec a did no
help o elucida e he s uc u al assignmen . Howe e , i s 1H-NMR spec a showed small
couplings cons an s o 3J2–3, 3J3–4 and 3J4–5 (2.0 Hz, 3.2 Hz and 5.2 Hz, espec i ely). This
pa e n is in ag eemen wi h an (S) absolu e con igu a ion a C-2, wi h he pipe idine dis-
playing a p e e ed 1C4 con o ma ion (sligh ly dis o ed due o he used dioxolane ing)
in which he bulky chain lies in he equa o ial posi ion and H-3 and H-4 a e in an equa o-
ial o ien a ion (Figu e 2). In he 1D-NOESY spec a o compound 15, s ong NOE co e-
la ion peaks we e obse ed be ween H-2 and H-4, H-4 and Hb-6, and H-2 and Hb-6, which
es i y o hei mu ual 1,3-diaxial posi ion and allow o con i m he (R) con igu a ion a C-
2 (see Supplemen a y Ma e ials). Indeed, he axial o ien a ion o H-2 de i es om a p e-
e ed 4C1 con o ma ion, which accommoda es he bulky chain again in an equa o ial po-
si ion (Figu e 2).
Ha
NH
OH
H
H
R
H
O56
2(S)
O
43
1C4
Hb
H
R = pen yl NH
HO
R
H
O
H
H
3
6
54
2
H
O
H
H
(S)
4C1
H
NH
OH
H
R
H
H
O56
(R)
O
43
1C4
H
H
R = pen yl NH
HO
H
R
O
H
Ha
3
6
54
2
H
O
Hb
H
(R)
4C1
2
14
15
1H-NMR (selec ed
signals)
H-2 = 2.73 d (7.0, 2.0)
H-3 = 3.80 (2.6)
H-4 = 4.14 dd (5.2, 3.2)
H-5 = 4.19 q (6.3)
Ha-6 = 2.66 dd (13.2,
7.6)
Hb-6 = 3.05 dd (13.2,
5.6)
1H-NMR (selec ed
signals)
H-2 = 2.27-2.21 m
H-3 = 3.32-3.24 m
H-4 = 3.84 (6.2)
H-5 = 4.21-4.19 m
Ha-6 = 3.32-3.24 m
Hb-6 = 2.93 d (13.2)
Scheme 3. The ing-closu e educ i e amina ion sequence.
Ca e ul analysis o he
1
H-NMR, 2D-NMR and 1D-NOESY spec a ca ied ou on
pipe idines
14
and
15
con i med he s e eochemical ou come o he G igna d addi ion. The
1
H-NMR signals o he azasuga po ion o pipe idines
14
and
15
, oge he wi h hei
coupling cons an s, a e shown in Figu e 2. Fo compound
14
, 1D-NOESY spec a did
no help o elucida e he s uc u al assignmen . Howe e , i s
1
H-NMR spec a showed
small couplings cons an s o
3
J
2–3
,
3
J
3–4
and
3
J
4–5
(2.0 Hz, 3.2 Hz and 5.2 Hz, espec i ely).
This pa e n is in ag eemen wi h an (S) absolu e con igu a ion a C-2, wi h he pipe idine
displaying a p e e ed
1
C
4
con o ma ion (sligh ly dis o ed due o he used dioxolane
ing) in which he bulky chain lies in he equa o ial posi ion and H-3 and H-4 a e in an
equa o ial o ien a ion (Figu e 2). In he 1D-NOESY spec a o compound
15
, s ong NOE
co ela ion peaks we e obse ed be ween H-2 and H-4, H-4 and H
b
-6, and H-2 and H
b
-6,
which es i y o hei mu ual 1,3-diaxial posi ion and allow o con i m he (R) con igu a ion
a C-2 (see Supplemen a y Ma e ials). Indeed, he axial o ien a ion o H-2 de i es om a
p e e ed
4
C
1
con o ma ion, which accommoda es he bulky chain again in an equa o ial
posi ion (Figu e 2).
Molecules 2022, 27, x FOR PEER REVIEW 5 o 21
in 2 days and excellen yields a e ea men wi h a s ongly basic anion exchange esin
(Scheme 3).
Scheme 3. The ing-closu e educ i e amina ion sequence.
Ca e ul analysis o he 1H-NMR, 2D-NMR and 1D-NOESY spec a ca ied ou on pi-
pe idines 14 and 15 con i med he s e eochemical ou come o he G igna d addi ion. The
1H-NMR signals o he azasuga po ion o pipe idines 14 and 15, oge he wi h hei
coupling cons an s, a e shown in Figu e 2. Fo compound 14, 1D-NOESY spec a did no
help o elucida e he s uc u al assignmen . Howe e , i s 1H-NMR spec a showed small
couplings cons an s o 3J2–3, 3J3–4 and 3J4–5 (2.0 Hz, 3.2 Hz and 5.2 Hz, espec i ely). This
pa e n is in ag eemen wi h an (S) absolu e con igu a ion a C-2, wi h he pipe idine dis-
playing a p e e ed 1C4 con o ma ion (sligh ly dis o ed due o he used dioxolane ing)
in which he bulky chain lies in he equa o ial posi ion and H-3 and H-4 a e in an equa o-
ial o ien a ion (Figu e 2). In he 1D-NOESY spec a o compound 15, s ong NOE co e-
la ion peaks we e obse ed be ween H-2 and H-4, H-4 and Hb-6, and H-2 and Hb-6, which
es i y o hei mu ual 1,3-diaxial posi ion and allow o con i m he (R) con igu a ion a C-
2 (see Supplemen a y Ma e ials). Indeed, he axial o ien a ion o H-2 de i es om a p e-
e ed 4C1 con o ma ion, which accommoda es he bulky chain again in an equa o ial po-
si ion (Figu e 2).
Ha
NH
OH
H
H
R
H
O56
2(S)
O
43
1C4
Hb
H
R = pen yl NH
HO
R
H
O
H
H
3
6
54
2
H
O
H
H
(S)
4C1
H
NH
OH
H
R
H
H
O56
(R)
O
43
1C4
H
H
R = pen yl NH
HO
H
R
O
H
Ha
3
6
54
2
H
O
Hb
H
(R)
4C1
2
14
15
1H-NMR (selec ed
signals)
H-2 = 2.73 d (7.0, 2.0)
H-3 = 3.80 (2.6)
H-4 = 4.14 dd (5.2, 3.2)
H-5 = 4.19 q (6.3)
Ha-6 = 2.66 dd (13.2,
7.6)
Hb-6 = 3.05 dd (13.2,
5.6)
1H-NMR (selec ed
signals)
H-2 = 2.27-2.21 m
H-3 = 3.32-3.24 m
H-4 = 3.84 (6.2)
H-5 = 4.21-4.19 m
Ha-6 = 3.32-3.24 m
Hb-6 = 2.93 d (13.2)
Figu e 2.
The wo possible chai con o ma ions o pipe idines
14
and
15
. Dihed al angles be ween
bonds analysed o he de e mina ion o he p e e ed con o ma ion a e shown in blue. Red double-
ended a ows show he obse ed diagnos ic NOE co ela ion peaks in he 1D-NOESY NMR spec a.
1
H-NMR chemical shi s o selec ed signals a e epo ed, wi h he co esponding coupling cons an s
in pa en hesis (in Hz).

Molecules 2022,27, 4008 6 o 21
Final emo al o he ace onide p o ec ing g oups unde acidic condi ions (aqueous
HCl in MeOH) ollowed by basic ea men a o ded he a ge ihyd oxypipe idines
10
and 12 as ee amines in good yields (Scheme 4).
Molecules 2022, 27, x FOR PEER REVIEW 6 o 21
Figu e 2. The wo possible chai con o ma ions o pipe idines 14 and 15. Dihed al angles be ween
bonds analysed o he de e mina ion o he p e e ed con o ma ion a e shown in blue. Red double-
ended a ows show he obse ed diagnos ic NOE co ela ion peaks in he 1D-NOESY NMR spec a.
1H-NMR chemical shi s o selec ed signals a e epo ed, wi h he co esponding coupling cons an s
in pa en hesis (in Hz).
Final emo al o he ace onide p o ec ing g oups unde acidic condi ions (aqueous
HCl in MeOH) ollowed by basic ea men a o ded he a ge ihyd oxypipe idines 10
and 12 as ee amines in good yields (Scheme 4).
Scheme 4. The inal dep o ec ion s ep.
The in e sion o con igu a ion a C-3 in compounds 11 and 13 was achie ed h ough
an oxida ion– educ ion sequence ca ied ou on empo a ily N-p o ec ed pipe idines
(Schemes 5 and 6).
Scheme 5. P o ec ion–oxida ion sequence.
Scheme 4. The inal dep o ec ion s ep.
The in e sion o con igu a ion a C-3 in compounds
11
and
13
was achie ed h ough
an oxida ion– educ ion sequence ca ied ou on empo a ily N-p o ec ed pipe idines
(Schemes 5and 6).
Molecules 2022, 27, x FOR PEER REVIEW 6 o 21
Figu e 2. The wo possible chai con o ma ions o pipe idines 14 and 15. Dihed al angles be ween
bonds analysed o he de e mina ion o he p e e ed con o ma ion a e shown in blue. Red double-
ended a ows show he obse ed diagnos ic NOE co ela ion peaks in he 1D-NOESY NMR spec a.
1H-NMR chemical shi s o selec ed signals a e epo ed, wi h he co esponding coupling cons an s
in pa en hesis (in Hz).
Final emo al o he ace onide p o ec ing g oups unde acidic condi ions (aqueous
HCl in MeOH) ollowed by basic ea men a o ded he a ge ihyd oxypipe idines 10
and 12 as ee amines in good yields (Scheme 4).
Scheme 4. The inal dep o ec ion s ep.
The in e sion o con igu a ion a C-3 in compounds 11 and 13 was achie ed h ough
an oxida ion– educ ion sequence ca ied ou on empo a ily N-p o ec ed pipe idines
(Schemes 5 and 6).
Scheme 5. P o ec ion–oxida ion sequence.
Scheme 5. P o ec ion–oxida ion sequence.
Molecules 2022, 27, x FOR PEER REVIEW 7 o 21
Scheme 6. Reduc ion-dep o ec ion sequence.
The p o ec ion o pipe idines 14 and 15 wi h he e -bu yloxyca bonyl g oup o ob-
ain compounds 24 and 25, ollowed by oxida ion wi h Dess Ma in pe iodinane, p o ided
he key ke one in e media es 26 and 27 in good yields o e wo s eps (Scheme 5). Bo h
ke ones unde wen sodium bo ohyd ide educ ion in good yields and high selec i i y,
showing he same p e e ence o an a ack on he Re ace, which p oduced he all-cis ela-
i e con igu a ion in he esul ing ihyd oxypipe idines (Scheme 6). The high s e eose-
lec i i y obse ed in he educ ion o 26 and 27 o 28 and 29, espec i ely, can be asc ibed
o a s ongly a ou ed axial a ack o hyd ide a he C-3 ca bonyl in he 1C4 chai con o -
ma ion in bo h cases. Indeed, his con o ma ion allows a kine ically a ou ed app oach o
hyd ide an i o he icinal C-O bond, hus enjoying TS s abiliza ion by he low-lying en-
e gy σ* o C-O bond acco ding o he Felkin–Anh model (Figu e 3) [28,29].
Figu e 3. Fa o ed axial a ack o hyd ide o C=O bond.
Final emo al o he ace onide p o ec ing g oups o 28 and 29 unde acidic condi ions
(aqueous HCl in MeOH), ollowed by basic ea men a o ded he a ge ihyd oxypi-
pe idines 11 and 13 as ee amines in excellen yields (92% and 98%, Scheme 6).
The occu ed in e sion o con igu a ion a C-3 in compounds 11 and 13 and hei
p e e ed con o ma ion we e es ablished on he basis o ca e ul analysis o hei 1H-NMR
and 1D-NOESY spec a. In pa icula , o compound 11, a s ong NOE co ela ion peak
be ween H-3 and H-5 was obse ed (Figu e 4). Toge he wi h he high coupling cons an s
obse ed o he signal o H-3, his inding con i med an axial o ien a ion o his p o on
wi h an ax-ax ela ionship wi h H-2 (J = 8.0 Hz) and a 1,3-diaxial in e ac ion wi h H-5. This
pa e n ag ees wi h an (S) absolu e con igu a ion a C-3, wi h he pipe idine displaying a
p e e ed 1C4 con o ma ion in which he bulky chain lies in he equa o ial posi ion. 1D-
NOESY s udies o compound 13 showed s ong NOE peaks co ela ing p o ons H-2, Hb-
6 and H-4 (Figu e 4) (see Supplemen a y Ma e ials). Mo eo e , he 1H-NMR spec um
showed b oad single s o p o ons H-3 and H-5, consis en wi h hei equa o ial posi ion.
These e idences con i m he (S) con igu a ion a C-3 and a 4C1 con o ma ion in which he
bulky chain is equa o ial.
Scheme 6. Reduc ion-dep o ec ion sequence.
Molecules 2022,27, 4008 7 o 21
The p o ec ion o pipe idines
14
and
15
wi h he e -bu yloxyca bonyl g oup o ob ain
compounds
24
and
25
, ollowed by oxida ion wi h Dess Ma in pe iodinane, p o ided
he key ke one in e media es
26
and
27
in good yields o e wo s eps (Scheme 5). Bo h
ke ones unde wen sodium bo ohyd ide educ ion in good yields and high selec i i y,
showing he same p e e ence o an a ack on he Re ace, which p oduced he all-cis ela i e
con igu a ion in he esul ing ihyd oxypipe idines (Scheme 6). The high s e eoselec i i y
obse ed in he educ ion o
26
and
27
o
28
and
29
, espec i ely, can be asc ibed o a
s ongly a ou ed axial a ack o hyd ide a he C-3 ca bonyl in he
1
C
4
chai con o ma ion
in bo h cases. Indeed, his con o ma ion allows a kine ically a ou ed app oach o hyd ide
an i o he icinal C-O bond, hus enjoying TS s abiliza ion by he low-lying ene gy
σ
* o
C-O bond acco ding o he Felkin–Anh model (Figu e 3) [28,29].
Molecules 2022, 27, x FOR PEER REVIEW 7 o 21
Scheme 6. Reduc ion-dep o ec ion sequence.
The p o ec ion o pipe idines 14 and 15 wi h he e -bu yloxyca bonyl g oup o ob-
ain compounds 24 and 25, ollowed by oxida ion wi h Dess Ma in pe iodinane, p o ided
he key ke one in e media es 26 and 27 in good yields o e wo s eps (Scheme 5). Bo h
ke ones unde wen sodium bo ohyd ide educ ion in good yields and high selec i i y,
showing he same p e e ence o an a ack on he Re ace, which p oduced he all-cis ela-
i e con igu a ion in he esul ing ihyd oxypipe idines (Scheme 6). The high s e eose-
lec i i y obse ed in he educ ion o 26 and 27 o 28 and 29, espec i ely, can be asc ibed
o a s ongly a ou ed axial a ack o hyd ide a he C-3 ca bonyl in he 1C4 chai con o -
ma ion in bo h cases. Indeed, his con o ma ion allows a kine ically a ou ed app oach o
hyd ide an i o he icinal C-O bond, hus enjoying TS s abiliza ion by he low-lying en-
e gy σ* o C-O bond acco ding o he Felkin–Anh model (Figu e 3) [28,29].
Figu e 3. Fa o ed axial a ack o hyd ide o C=O bond.
Final emo al o he ace onide p o ec ing g oups o 28 and 29 unde acidic condi ions
(aqueous HCl in MeOH), ollowed by basic ea men a o ded he a ge ihyd oxypi-
pe idines 11 and 13 as ee amines in excellen yields (92% and 98%, Scheme 6).
The occu ed in e sion o con igu a ion a C-3 in compounds 11 and 13 and hei
p e e ed con o ma ion we e es ablished on he basis o ca e ul analysis o hei 1H-NMR
and 1D-NOESY spec a. In pa icula , o compound 11, a s ong NOE co ela ion peak
be ween H-3 and H-5 was obse ed (Figu e 4). Toge he wi h he high coupling cons an s
obse ed o he signal o H-3, his inding con i med an axial o ien a ion o his p o on
wi h an ax-ax ela ionship wi h H-2 (J = 8.0 Hz) and a 1,3-diaxial in e ac ion wi h H-5. This
pa e n ag ees wi h an (S) absolu e con igu a ion a C-3, wi h he pipe idine displaying a
p e e ed 1C4 con o ma ion in which he bulky chain lies in he equa o ial posi ion. 1D-
NOESY s udies o compound 13 showed s ong NOE peaks co ela ing p o ons H-2, Hb-
6 and H-4 (Figu e 4) (see Supplemen a y Ma e ials). Mo eo e , he 1H-NMR spec um
showed b oad single s o p o ons H-3 and H-5, consis en wi h hei equa o ial posi ion.
These e idences con i m he (S) con igu a ion a C-3 and a 4C1 con o ma ion in which he
bulky chain is equa o ial.
Figu e 3. Fa o ed axial a ack o hyd ide o C=O bond.
Final emo al o he ace onide p o ec ing g oups o
28
and
29
unde acidic condi ions
(aqueous HCl in MeOH), ollowed by basic ea men a o ded he a ge ihyd oxyp-
ipe idines 11 and 13 as ee amines in excellen yields (92% and 98%, Scheme 6).
The occu ed in e sion o con igu a ion a C-3 in compounds
11
and
13
and hei
p e e ed con o ma ion we e es ablished on he basis o ca e ul analysis o hei
1
H-NMR
and 1D-NOESY spec a. In pa icula , o compound
11
, a s ong NOE co ela ion peak
be ween H-3 and H-5 was obse ed (Figu e 4). Toge he wi h he high coupling cons an s
obse ed o he signal o H-3, his inding con i med an axial o ien a ion o his p o on
wi h an ax-ax ela ionship wi h H-2 (J = 8.0 Hz) and a 1,3-diaxial in e ac ion wi h H-5. This
pa e n ag ees wi h an (S) absolu e con igu a ion a C-3, wi h he pipe idine displaying
a p e e ed
1
C
4
con o ma ion in which he bulky chain lies in he equa o ial posi ion.
1D-NOESY s udies o compound
13
showed s ong NOE peaks co ela ing p o ons H-2,
H
b
-6 and H-4 (Figu e 4) (see Supplemen a y Ma e ials). Mo eo e , he
1
H-NMR spec um
showed b oad single s o p o ons H-3 and H-5, consis en wi h hei equa o ial posi ion.
These e idences con i m he (S) con igu a ion a C-3 and a
4
C
1
con o ma ion in which he
bulky chain is equa o ial.
To in es iga e he ole played by he posi ion o he alkyl chain on he biological
ac i i y, he ihyd oxypipe idine
21
alkyla ed a ni ogen wi h a pen yl chain was also
syn hesized. This aim was achie ed by alkyla ion o pipe idine
20
ollowed by dep o ec ion
o he ace onide g oup o 30 (40% yield o e wo s eps, Scheme 7).
Molecules 2022,27, 4008 8 o 21
Molecules 2022, 27, x FOR PEER REVIEW 8 o 21
Figu e 4. The wo possible chai con o ma ions o pipe idines 11 and 13. Dihed al angles be ween
bonds analysed o he de e mina ion o he p e e ed con o ma ion a e shown in blue. Red double-
ended a ows show he obse ed diagnos ic NOE co ela ion peaks in he 1D-NOESY NMR spec a.
1H-NMR chemical shi s o selec ed signals a e epo ed, wi h he co esponding coupling cons an s
in pa en hesis (in Hz).
To in es iga e he ole played by he posi ion o he alkyl chain on he biological ac-
i i y, he ihyd oxypipe idine 21 alkyla ed a ni ogen wi h a pen yl chain was also syn-
hesized. This aim was achie ed by alkyla ion o pipe idine 20 ollowed by dep o ec ion
o he ace onide g oup o 30 (40% yield o e wo s eps, Scheme 7).
Scheme 7. Alkyla ion and dep o ec ion o a o d compound 21.
2.2. P elimina y Biological Sc eening owa ds Human β-Galac osidase and β-Glucosidase
I is known ha 3,4,5- ihyd oxipipe idine display i s biological p ope ies in i s ully
dep o ec ed o m [30]. The e o e, he a ge compounds 10–13 and 21 we e i s e alua ed
as human lysosomal β-Gal inhibi o s a 1 mM in human leukocy e homogena es, and as
human lysosomal β-Glu (β-glucosidase) inhibi o s a 1 mM in o de o e alua e he selec-
i i y o he new compounds. The esul s a e shown in Table 2. Only compounds 10 and
12 showed a good selec i i y and conside able 90% and 42% inhibi o y ac i i y owa ds
β-Gal, wi h a mode a e IC50 (400 ± 15 µM and 1.15 ± 0.1 mM, espec i ely). The ihyd ox-
ypipe idine 10 wi h he (S) con igu a ion a C-2 (Table 2, En y 1) was mo e ac i e han
he co esponding epime ic ihyd oxypipe idine 12 wi h he (R) con igu a ion (Table 2,
En y 2). The p esence o a pen yl chain in ihyd oxypipe idines 10 and 12 appea s o
bene i he inhibi o y ac i i y, in ag eemen wi h p e ious esul s [19,20].
Figu e 4.
The wo possible chai con o ma ions o pipe idines
11
and
13
. Dihed al angles be ween
bonds analysed o he de e mina ion o he p e e ed con o ma ion a e shown in blue. Red double-
ended a ows show he obse ed diagnos ic NOE co ela ion peaks in he 1D-NOESY NMR spec a.
1
H-NMR chemical shi s o selec ed signals a e epo ed, wi h he co esponding coupling cons an s
in pa en hesis (in Hz).
Molecules 2022, 27, x FOR PEER REVIEW 8 o 21
Figu e 4. The wo possible chai con o ma ions o pipe idines 11 and 13. Dihed al angles be ween
bonds analysed o he de e mina ion o he p e e ed con o ma ion a e shown in blue. Red double-
ended a ows show he obse ed diagnos ic NOE co ela ion peaks in he 1D-NOESY NMR spec a.
1H-NMR chemical shi s o selec ed signals a e epo ed, wi h he co esponding coupling cons an s
in pa en hesis (in Hz).
To in es iga e he ole played by he posi ion o he alkyl chain on he biological ac-
i i y, he ihyd oxypipe idine 21 alkyla ed a ni ogen wi h a pen yl chain was also syn-
hesized. This aim was achie ed by alkyla ion o pipe idine 20 ollowed by dep o ec ion
o he ace onide g oup o 30 (40% yield o e wo s eps, Scheme 7).
Scheme 7. Alkyla ion and dep o ec ion o a o d compound 21.
2.2. P elimina y Biological Sc eening owa ds Human β-Galac osidase and β-Glucosidase
I is known ha 3,4,5- ihyd oxipipe idine display i s biological p ope ies in i s ully
dep o ec ed o m [30]. The e o e, he a ge compounds 10–13 and 21 we e i s e alua ed
as human lysosomal β-Gal inhibi o s a 1 mM in human leukocy e homogena es, and as
human lysosomal β-Glu (β-glucosidase) inhibi o s a 1 mM in o de o e alua e he selec-
i i y o he new compounds. The esul s a e shown in Table 2. Only compounds 10 and
12 showed a good selec i i y and conside able 90% and 42% inhibi o y ac i i y owa ds
β-Gal, wi h a mode a e IC50 (400 ± 15 µM and 1.15 ± 0.1 mM, espec i ely). The ihyd ox-
ypipe idine 10 wi h he (S) con igu a ion a C-2 (Table 2, En y 1) was mo e ac i e han
he co esponding epime ic ihyd oxypipe idine 12 wi h he (R) con igu a ion (Table 2,
En y 2). The p esence o a pen yl chain in ihyd oxypipe idines 10 and 12 appea s o
bene i he inhibi o y ac i i y, in ag eemen wi h p e ious esul s [19,20].
Scheme 7. Alkyla ion and dep o ec ion o a o d compound 21.
2.2. P elimina y Biological Sc eening owa ds Human β-Galac osidase and β-Glucosidase
I is known ha 3,4,5- ihyd oxipipe idine display i s biological p ope ies in i s ully
dep o ec ed o m [
30
]. The e o e, he a ge compounds
10
–
13
and
21
we e i s e alua ed
as human lysosomal
β
-Gal inhibi o s a 1 mM in human leukocy e homogena es, and
as human lysosomal
β
-Glu (
β
-glucosidase) inhibi o s a 1 mM in o de o e alua e he
selec i i y o he new compounds. The esul s a e shown in Table 2. Only compounds
10
and
12
showed a good selec i i y and conside able 90% and 42% inhibi o y ac i i y
owa ds
β
-Gal, wi h a mode a e IC
50
(400
±
15
µ
M and 1.15
±
0.1 mM, espec i ely).
The ihyd oxypipe idine
10
wi h he (S) con igu a ion a C-2 (Table 2, En y 1) was mo e
ac i e han he co esponding epime ic ihyd oxypipe idine
12
wi h he (R) con igu a ion
(Table 2, En y 2). The p esence o a pen yl chain in ihyd oxypipe idines
10
and
12
appea s o bene i he inhibi o y ac i i y, in ag eemen wi h p e ious esul s [19,20].
Con e sely, he opposi e con igu a ion a C-3 as in compounds
11
and
13
esul ed in a
d ama ic dec ease o
β
-Gal inhibi ion (down o 36% and 35%, espec i ely, ega dless o he
con igu a ion a C-2) (Table 2, en ies 3 and 4 s. en ies 1 and 2) in line wi h ou p e ious
esul s on alkyla ed azasuga s wi h a ela i e “all-cis” con igu a ion a he hyd oxy/amine-
subs i u ed s e eocen e s [
31
]. These esul s con u ed ou expec a ions ha inhibi ion o
β
-Gal migh bene i om he “all-cis” con igu a ion o he h ee hyd oxy g oups. Mo eo e ,
he “all-cis” con igu a ion made compounds
11
and
13
be e inhibi o s o
β
-Glu, e oding
any selec i i y in inhibi ion o he wo enzymes. N-Alkyla ion in compound
21
was also
dele e ious o inhibi ion agains
β
-Gal (Table 2, En y 5). None o he newly syn hesized
Molecules 2022,27, 4008 9 o 21
compounds showed a signi ican inhibi ion owa ds
β
-glucosidase a 1 mM ( om 1% o
45%). Once again, he esul s highligh ha he p esence o a longe alkyl chain is essen ial
o p o iding a ini y owa ds β-glucosidase [22,23,31–34].
Table 2. β-Gal and GCase (β-Glu) inhibi ion in human leukocy es om heal hy dono s.
En y Compounds
β-Gal β-Glu
Inhibi ion
[%] a
Inhibi ion
[%] a
110 90
400 ±15 µMb1
212 42
1.15 ±0.1 mM b5
311 36 34
413 35 44
521 20 45
a
Pe cen age inhibi ion o
β
-Gal o
β
-Glu in human leukocy e ex ac s om heal hy dono s incuba ed wi h
compounds (1 mM).
b
IC
50
alues we e de e mined by measu ing
β
-Gal ac i i y a di e en concen a ions o
each inhibi o o compounds showing inhibi o y ac i i y highe han 40% a 1 mM.
Since li e a u e da a show ha po en PCs o
β
-Gal can also be ound among mode a e
and ela i ely good inhibi o s [
21
], he abili y o compounds
10
and
12
o escue he
enzyma ic ac i i y o β-Gal on cell lines bea ing selec ed mu a ions was es ed.
Kine ic analyses we e also pe o med o de e mine he mechanism o ac ion o
12
(see Supplemen a y Ma e ials), which showed chape oning p ope ies (see Sec ion 2.3).
The esul s indica e ha i ac s as a noncompe i i e
β
-Gal inhibi o , wi h a K
i
alue o
1.4 ±0.7 mM.
2.3. Pha macological Chape oning Ac i i y
In his expe imen , he inhibi o s o
β
-Gal
10
and
12
we e incuba ed o ou days wi h
ib oblas s om wo ju enile GM1 gangliosidosis pa ien s bea ing p.Ile51Asn/p.A g201His
and p.A g201His/Ty 83Leu sX8 mu a ions, espec i ely, ollowed by assays o cell lysa es
o lysosomal
β
-Gal ac i i y (see Supplemen a y Ma e ials). The expe imen s showed
ha all compounds a e non- oxic a high concen a ions in bo h cell lines. Compound
12
showed a
β
-Gal ac i i y escue o 1.40- old a 600
µ
M on GM1 pa ien ib oblas s bea ing
he p.Ile51Asn/p.A g201His mu a ions.
The esul s ob ained sugges ha only he p.Ile51Asn/p.A g201His mu a ions a e
esponsi e o ou compound. In e es ingly, he s onge inhibi o
10
did no show any
enzyme ac i i y escue.
To he bes o ou knowledge, compound
12
ep esen s he i s example o a non-
compe i i e
β
-Gal inhibi o ac ing as a pha macological chape one on GM1 pa ien s’ cells.
A chape oning beha iou o o he noncompe i i e inhibi o s o lysosomal enzymes has
been p e iously obse ed, in pa icula o gene mu a ions leading o Gauche , Fab y,
Pompe, and Tay–Sachs diseases [35].
3. Ma e ials and Me hods
3.1. Gene al Expe imen al P ocedu es o he Syn heses
Comme cial eagen s we e used as ecei ed. All eac ions we e ca ied ou unde mag-
ne ic s i ing and moni o ed by TLC on 0.25 mm silica gel pla es (Me ck F254). Column ch o-
ma og aphies we e ca ied ou on Silica Gel 60 (32–63
µ
m) o on silica gel (
230–400 mesh
,
Me ck, Da ms ad , Ge many). Yields e e o spec oscopically and analy ically pu e com-
pounds unless o he wise s a ed.
1
H-NMR spec a we e eco ded on a Va ian Gemini
200 MHz,
a Va ian Me cu y 400 MHz, o on a Va ian INOVA 400 MHz ins umen a 25
◦
C.
13
C-NMR spec a we e eco ded a 50 MHz o a 100 MHz. Chemical shi s a e epo ed
ela i e o CDCl
3
(
1
H:
δ
= 7.27 ppm,
13
C:
δ
= 77.0 ppm). In eg als a e in acco dance wi h
assignmen s; coupling cons an s a e gi en in Hz. Fo de ailed peak assignmen s, 2D spec-
a we e measu ed (g-COSY, g-HSQC) and 1D-NOESY. Small-scale mic owa e-assis ed
Molecules 2022,27, 4008 16 o 21
a H-3, and i adia ion o H-3 ga e a NOE a H-5. MS (ESI): m/z(%) = 226.10 (100) [M + H]
+
.
C10H21NO3(203.28): calcd. C, 59.09; H, 10.41; N, 6.89; ound C, 59.12; H, 10.23; N, 6.51.
3.1.15. Syn hesis o (2R,3S,4R,5R)-2-Pen ylpipe idine-3,4,5- iol (13)
A solu ion o
29
(24 mg, 0.07 mmol) in MeOH (3 mL) was le s i ing wi h 12 M
HCl (15
µ
L) a oom empe a u e o 16 h. The c ude mix u e was concen a ed o yield
he hyd ochlo ide sal o
29
. The co esponding ee amine was ob ained by dissol ing
he esidue in MeOH, hen he s ongly basic esin Ambe sep 900-OH was added, and
he mix u e was s i ed o 40 min. The esin was emo ed by il a ion o a o d 14 mg
(0.069 mmol, 98%) o 13 as ee base, as a pale-yellow oil.
13
: pale yellow oil.
[α]25
D
=
−
40.4 (c = 0.50, CH
3
OH).
1
H-NMR (400 MHz, CD
3
OD)
δ
= 3.79 (b s, 1H, H-5), 3.73 (b s, 1H, H-3), 3.46 (b s, 1H, H-4), 3.02 (d, J = 15.0 Hz, 1H,
H
a
-6), 2.69 (d, J = 14.0 Hz, 1H, H
b
-6), 2.44 ( , J = 6.8 Hz, 1H, H-2), 1.58–1.53 (m, 1H, H
a
-1
0
),
1.51–1.44 (m, 1H, H
a
-2
0
), 1.43–1.29 (m, 6H, H
b
-1
0
, H
b
-2
0
, H-3
0
–H-4
0
), 0.92 ( , J = 6.0 Hz, 3H,
H-5
0
) ppm.
13
C-NMR (100 MHz, CD
3
OD) = 72.6 (C-3), 71.3 (C-4), 71.7 (C-5), 60.0 (C-2),
51.6 (C-6)
, 33.2, 32.7, 26.7, 23.7 (4C, C-1
0
–C-4
0
), 14.4 (C-5
0
) ppm. 1D-NOESY: I adia ion
o H-2 ga e a NOE a H-4 and H
b
-6, and i adia ion o H-4 ga e a NOE a H-2 and H
b
-6.
MS (ESI): m/z (%) = 204.12 (100) [M + H]
+
. C
10
H
21
NO
3
(203.28): calcd. C, 59.09; H, 10.41;
N, 6.89; ound C, 59.17; H, 10.11; N, 6.70.
3.1.16. Syn hesis o (3R,4S,5R)-1-Pen yl-5-hyd oxy-3,4-O-(1-me hyle hylidene)-pipe idine (30)
To a solu ion o compound
20
(96 mg, 0.55 mmol) in ace oni ile (2 mL) and Milli-
Q wa e (0.6 mL), pen ylb omide (87
µ
L, 0.83 mmol) and po assium ca bona e (115 mg,
0.83 mmol
) we e added. The mix u e was s i ed unde mic owa e i adia ion a
120 ◦C
o
3 h, un il a TLC con ol a es ed o he disappea ance o he s a ing ma e ial
(CH
2
Cl
2
/MeOH/NH
4
OH (6%) 15:1:0.1). The mix u e was il e ed h ough Celi e
®,
and he
sol en was emo ed unde educed p essu e. The c ude eac ion was pu i ied by silica gel
lash column ch oma og aphy (eluen CH
2
Cl
2
/MeOH/NH
4
OH (6%) 15:1:0.1) ob aining
compound 30 (62 mg, 0.25 mmol, 45%, R = 0.34) as a waxy solid.
30:
waxy solid.
[α]24
D
= +15.0 (c = 0.50, CHCl
3
).
1
H-NMR (400 MHz, CDCl
3
)
δ
= 4.27
(q, J = 6.0 Hz, 1H, H-3), 4.03 ( , J = 4.6 Hz, 1H, H-4), 3.93–3.92 (m, 1H, H-5), 2.87 (b s, 1H,
OH), 2.72 (dd, J = 6.0, 12.0 Hz, 1H, H
a
-2), 2.55 (d, J = 12.0 Hz, 1H, H
a
-6), 2.46 (dd, J = 5.2,
11.6 Hz, 1H, H
b
-6), 2.40–2.33 (m, 3H, H
b
-2 and H-1
0
), 1.49 (s, 3H, C(CH
3
)
2
), 1.47–1.41 (m,
2H, H-2
0
), 1.34 (s, 3H, C(CH
3
)
2
), 1.31–1.20 (m, 4H, H-3
0
–H-4
0
), 0.87 ( , J = 7.0 Hz, 1H, H-5
0
)
ppm.
13
C-NMR (100 MHz, CDCl
3
)
δ
= 109.4 (C(CH
3
)
2
), 77.0 (C-4), 72.2 (C-3), 67.7 (C-5),
57.9 (C-1
0
), 56.0 (C-2 o C-6), 55.6 (C-2 o C-6), 29.7, 28.4, 26.6, 26.5, 22.7 (5C, C-2
0
–C-4
0
and
C(CH
3
)
2
), 14.1 (C-5
0
) ppm. MS (ESI): m/z(%) = 244.20 (100) [M + H]
+
. IR (CDCl
3
):
ν
= 1059,
1381, 1468, 2247, 2826, 2862, 2935, 2989, 3478 cm
−1
. C
13
H
25
NO
3
(243.35): calcd. C, 64.16; H,
10.36; N, 5.76; ound C, 64.34; H, 10.11; N, 5.70.
3.1.17. Syn hesis o (3R,5R)-1-Pen yl-3,4,5- ihyd oxy-pipe idine (21)
A solu ion o
30
(42 mg, 0.17 mmol) in MeOH (5 mL) was le s i ing wi h 12 M
HCl (25
µ
L) a oom empe a u e o 16 h. The c ude mix u e was concen a ed o yield
he hyd ochlo ide sal o
21
. The co esponding ee amine was ob ained by dissol ing
he esidue in MeOH, hen he s ongly basic esin Ambe sep 900-OH was added, and
he mix u e was s i ed o 40 min. The esin was emo ed by il a ion o a o d 30 mg
(0.15 mmol, 88%) o 21 [36] as he ee base, as a whi e solid.
21
: whi e solid m.p. 63–66
◦
C.
[α]24
D
=
−
39.7 (c = 0.61, CH
3
OH).
1
H-NMR (400 MHz,
CD
3
OD)
δ
= 3.91–3.90 (m, 1H, H-3), 3.83–3.78 (m, 1H, H-5), 3.42 (b s, 1H, H-4), 2.84–2.81
(m, 2H, H
a
-2 and H
a
-6), 2.43- 2.36 (m, 2H, H-1
0
), 2.34–2.30 (m, 1H, H
b
-6), 2.14 (b s, 1H,
H
b
-2), 1.56–1.51 (m, 2H, H-2
0
), 1.39–1.26 (m, 4H, H-3
0
–H-4
0
), 0.92 ( , J = 6.0 Hz, 3H, H-5
0
)
ppm.
13
C-NMR (100 MHz, CD
3
OD) = 75.1 (C-4), 69.4 (C-5), 69.0 (C-3), 59.3 (C-1
0
), 58.1
(C-2 o C-6), 57.4 (C-2 o C-6), 30.8, 27.1, 23.6, (3C, C-2
0
–C-4
0
), 14.4 (C-5
0
) ppm. MS (ESI):

Molecules 2022,27, 4008 17 o 21
m/z(%) = 204.08
(100) [M + H]
+
. C
10
H
21
NO
3
(203.15): calcd. C, 59.09; H, 10.41; N, 6.89;
ound C, 59.22; H, 10.33; N, 6.81.
3.2. Biological Sc eening owa ds Human Lysosomal β-Galac osidase (β-Gal) and
β-Glucosidase (GCase)
All expe imen s on biological ma e ials we e pe o med in acco dance wi h he e hical
s anda ds o he ins i u ional esea ch commi ee and wi h he 1964 Helsinki Decla a ion
and i s la e amendmen s. In keeping wi h e hical guidelines, all blood and cell samples
we e ob ained o s o age and analysed only a e w i en in o med consen o he pa ien s
(and/o hei amily membe s) was ob ained, using a o m app o ed by he local E hics
Commi ee (Codice P o ocollo: Lysola e “La e onse Lysosomal S o age Diso de s (LSDs)
in he di e en ial diagnosis o neu odegene a i e diseases: de elopmen o new diagnos ic
p ocedu es and ocus on po en ial pha macological chape ones (PCs). P ojec ID code:
16774_bio, 5 May 2020, Comi a o E ico Regionale pe la Spe imen azione Clinica della
Regione Toscana, A ea Vas a Cen o, Flo ence, I aly).
Con ols and pa ien s’ samples we e anonymized and used only o esea ch pu poses.
The new compounds we e sc eened a 1 mM concen a ion owa ds
β
-Galac osidase
(β-Gal) and β-Glucosidase (GCase) in leukocy es isola ed om heal hy dono s (con ols).
Isola ed leukocy es we e dis up ed by sonica ion, and a Mic o BCA P o ein Assay Ki
(Sigma–Ald ich, S . Louis, MO, USA) was used o de e mine he o al p o ein amoun o
he enzyma ic assay, acco ding o he manu ac u e ’s ins uc ions.
3.2.1. Human Lysosomal β-Galac osidase (β-Gal) Ac i i y
β
-Gal ac i i y was measu ed in a la -bo omed 96-well pla e. Compounds
10
–
13
and
21
solu ion (3
µ
L), 4.29
µ
g/
µ
L leukocy es homogena e 1:10 (7
µ
L), and subs a e
4-me hylumbelli e yl β
-D-galac opy anoside (1.47 mM, 20
µ
L, Sigma–Ald ich) in ace a e
bu e (0.1 M, pH 4.3) con aining NaCl (0.1 M) and sodium azide (0.02%) we e incuba ed a
37
◦
C o 1 h. The eac ion was s opped by he addi ion o sodium ca bona e (200
µ
L;
0.5 M
,
pH 10.7) con aining T i on X-100 (0.0025%), and he luo escence 4-me hylumbelli e one
eleased by
β
-galac osidase ac i i y was measu ed in Spec aMax M2 mic opla e eade
(
λ
ex = 365 nm,
λ
em = 435 nm; Molecula De ices). Inhibi ion is gi en wi h espec o
he con ol (wi hou compound). Pe cen age
β
-Gal inhibi ion is gi en wi h espec o he
con ol (wi hou compound). Da a a e mean SD (n = 3). Fo compounds showing
β
-Gal
inhibi o y ac i i y highe han 40% a 1 mM concen a ion, he IC
50
alues we e de e mined
by measu ing he ini ial hyd olysis a e wi h 4-me hylumbelli e yl
β
-D-galac opy anoside
(1.47 mM). Da a ob ained we e i ed by using he app op ia e equa ion ( o mo e de ails,
see he Supplemen a y Ma e ials).
3.2.2. Human Lysosomal β-Glucosidase (GCase) Ac i i y
GCase ac i i y was measu ed in a la -bo omed 96-well pla e. Compound solu ion
(
3µL
), 4.29
µ
g/
µ
L leukocy es homogena e (7
µ
L), and subs a e 4-me hylumbelli e yl-
β
-
D-glucoside (3.33 mM, 20
µ
L, Sigma–Ald ich) in ci a e/phospha e bu e (0.1:0.2, M/M,
pH 5.8
) con aining sodium au ochola e (0.3%) and T i on X-100 (0.15%) a 37
◦
C we e incu-
ba ed o 1 h. The eac ion was s opped by he addi ion o sodium ca bona e (200
µ
L; 0.5 M,
pH 10.7) con aining T i on X-100 (0.0025%), and he luo escence o 4-me hylumbelli e one
eleased by
β
-glucosidase ac i i y was measu ed in Spec aMax M2 mic opla e eade
(
λex = 365 nm
,
λ
em = 435 nm; Molecula De ices). A pe cen age GCase inhibi ion is gi en
wi h espec o he con ol (wi hou compound). Da a a e mean SD (n = 3).
3.3. Kine ic Analysis o Compound 12 s. β-Gal
The ac ion mechanism o compound
12
was de e mined s udying he dependence o he
main kine ic pa ame e s (Km and Vmax) on he inhibi o concen a ion. Kine ic da a we e
analysed using he Linewea e -Bu k plo ( o mo e de ails, see Supplemen a y Ma e ials).
Molecules 2022,27, 4008 18 o 21
3.4. Pha macological Chape oning Ac i i y
Fib oblas s wi h he p.Ile51Asn/p.A g201His and he p.A g201His/Ty 83Leu sX8
mu a ions om Ju enile GM1 pa ien s we e ob ained om Meye Child en’s Hospi al
(50139 Fi enze, I aly).
Fib oblas cells (15.0
×
10
4
) we e seeded in T25 lasks wi h DMEM supplemen ed wi h
e al bo ine se um (10%), penicillin/s ep omycin (1%), and glu amine (1%) and incuba ed
a 37
◦
C wi h 5% CO
2
o 24 h. The medium was emo ed, and esh medium con aining
he compounds was added o he cells and incuba ed o ou days. The medium was
emo ed, and he cells we e washed wi h PBS and de ached wi h ypsin o ob ain cell
pelle s, which we e washed ou imes wi h PBS, ozen, and lysed by sonica ion in wa e .
Enzyme ac i i y was measu ed as epo ed abo e. Repo ed da a a e mean S.D. (n = 2).
4. Conclusions
Fou new ihyd oxypipe idines wi h a C-2 pen yl chain wi h bo h con igu a ions
we e syn hesized, oge he wi h hei “all-cis” hyd oxy epime s, wi h he aim o inding
new human lysosomal β-Gal inhibi o s and po en ial PCs o GM1-gangliosidosis.
The syn hesis exploi ed he addi ion o pen ylmagnesium b omide o ni one
18
,
de i ed om aldehyde
19
, in he p esence o absence o Lewis acid ollowed by RA, o
yield he wo 2-pen yl 3,4,5- ihyd oxypipe idines. The in e sion o con igu a ion a C-3
was achie ed h ough an oxida ion– educ ion sequence. To in es iga e he ole o he chain
posi ion on he ac i i y, compound
21
was syn hesized o compa ison, s a ing om he
pipe idine in e media e 20 ia N-alkyla ion.
Biologic es s o he new compounds showed ha
10
and
12
a e
β
-Gal inhibi o s
wi h a mode a e IC
50
(400
±
15
µ
M and 1.15
±
0.1 mM). Kine ic analyses e ealed a
noncompe i i e mode o inhibi ion o
12
, which also showed chape oning p ope ies, wi h
K
i
alue o 1.4
±
0.7 mM. Mo eo e , good selec i i y owa ds
β
-Gal wi h espec o
β
-Glu
was obse ed. The poo
β
-Glu inhibi o y ac i i y o all compounds con i med ha he
p esence o a longe linea alkyl chain (a leas eigh ca bon a oms) is essen ial o impa
s ong β-Glu inhibi o y ac i i y.
Tes ing compounds
10
and
12
as po en ial PCs in ib oblas s om ju enile GM1 gan-
gliosidosis pa ien s bea ing he p.Ile51Asn/p.A g201His and he p.A g201His/Ty 83Leu sX8
mu a ions highligh ed ha only
12
allows an ac i i y escue o
β
-Gal (40% a 600
µ
M) on
GM1 pa ien s bea ing he p.Ile51Asn/p.A g201His mu a ions, hus ep esen ing, o he bes
o ou knowledge, a unique example o a non-compe i i e inhibi o wi h chape oning abil-
i y o GM1 gangliosidosis. The he e epo ed ib oblas s, which de i e om ju enile GM1
gangliosidosis pa ien s, sha e he p.A g201His mu a ion in one allele. Thus, he escue o
he
in i o
sys em bea ing he bi-allelic composi ion p.Ile51Asn/A g201His can be asc ibed
o he chape one ac i i y o compound 12 on he p.Ile51Asn mu a ion-bea ing allele.
I has been p e iously epo ed ha he p.Ile51Asn mu a ion, eplacing a nonpola
esidue in a hyd ophobic pocke in o a pola esidue, is likely o ad e sely a ec he old
o he
β
-Gal p o ein [
3
]. This biochemical cha ac e is ic makes he p.Ile51Asn mu a ion
pa icula ly p one o an enzyma ic s abilisa ion and a escue o
β
-Gal ac i i y induced by a
chape one, as demons a ed by he use o compound 12.
Supplemen a y Ma e ials:
The ollowing suppo ing in o ma ion can be downloaded a : h ps:
//www.mdpi.com/a icle/10.3390/molecules27134008/s1: 1H-NMR, 13C-NMR and selec ed 1D
NOESY spec a o new compounds (Figu es S1–S40); enzyma ic sc eening and kine ic analysis
(Figu es S41–S48); in i o assays on cell lines (Figu es S49 and S50).
Au ho Con ibu ions:
F.C. (F ancesca Clemen e), C.M., A.G. and F.C. (F ancesca Ca dona) planned
he syn he ic s a egy. F.C. (F ancesca Clemen e) pe o med he syn heses. F.C. (F ancesca Clemen e),
S.F. and M.M.-B. pe o med he biological expe imen s. A.C., P.P. and A.M. supe ised he biological
expe imen s. All au ho s ha e ead and ag eed o he published e sion o he manusc ip .
Funding:
The esea ch was unded by Regione Toscana (Bando Salu e 2018) o he p ojec : “La e
onse Lysosomal S o age Diso de s (LSDs) in he di e en ial diagnosis o neu odegene a i e diseases:
Molecules 2022,27, 4008 19 o 21
de elopmen o new diagnos ic p ocedu es and ocus on po en ial pha macological chape ones
(PCs), Ac onym: Lysola e) and by Uni e si àdi Fi enze and Fondazione CR Fi enze (“Bando
congiun o pe il inanziamen o di p oge i compe i i i sulle mala ie neu odegene a i e 2018”.
P ojec : A mul idisciplina y app oach o a ge Pa kinson’s disease in Gauche - ela ed popula ion,
Ac onym: MuTaPa Ga).
Ins i u ional Re iew Boa d S a emen :
This s udy was conduc ed in acco dance wi h he e hical
s anda ds o he ins i u ional esea ch commi ee and wi h he 1964 Helsinki Decla a ion and i s
la e amendmen s. and app o ed by he Comi a o E ico Regionale pe la Spe imen azione Clinica
della Regione Toscana, A ea Vas a Cen o, Flo ence, I aly (Codice P o ocollo: Lysola e “La e onse
Lysosomal S o age Diso de s (LSDs) in he di e en ial diagnosis o neu odegene a i e diseases:
de elopmen o new diagnos ic p ocedu es and ocus on po en ial pha macological chape ones (PCs).
P ojec ID code: 16774_bio, 5 May 2020).
In o med Consen S a emen :
In o med consen was ob ained om all subjec s in ol ed in he
s udy. Da a we e anonymized.
Da a A ailabili y S a emen :
The au ho s con i m ha he da a suppo ing he indings o his s udy
a e a ailable wi hin he a icle and/o i s Suppo ing In o ma ion ile.
Acknowledgmen s:
We hank MIUR-I aly (“P oge o Dipa imen i di Eccellenza 2018
−
2022”) allo-
ca ed o he Depa men o Chemis y “Ugo Schi ”, Uni e si àdi Fi enze and he AMMeC (Associ-
azione Mala ie Me aboliche e Congeni e, I alia).
Con lic s o In e es : The au ho s decla e no con lic o in e es .
Sample A ailabili y:
Samples o he compounds epo ed in he manusc ip a e no a ailable om
he au ho s.
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