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Changes in Phonation and Their Relations with Progress of Parkinson’s Disease

Abstract

Hypokinetic dysarthria, which is associated with Parkinson’s disease (PD), affects several speech dimensions, including phonation. Although the scientific community has dealt with a quantitative analysis of phonation in PD patients, a complex research revealing probable relations between phonatory features and progress of PD is missing. Therefore, the aim of this study is to explore these relations and model them mathematically to be able to estimate progress of PD during a two-year follow-up. We enrolled 51 PD patients who were assessed by three commonly used clinical scales. In addition, we quantified eight possible phonatory disorders in five vowels. To identify the relationship between baseline phonatory features and changes in clinical scores, we performed a partial correlation analysis. Finally, we trained XGBoost models to predict the changes in clinical scores during a two-year follow-up. For two years, the patients’ voices became more aperiodic with increased microperturbations of frequency and amplitude. Next, the XGBoost models were able to predict changes in clinical scores with an error in range 11–26%. Although we identified some significant correlations between changes in phonatory features and clinical scores, they are less interpretable. This study suggests that it is possible to predict the progress of PD based on the acoustic analysis of phonation. Moreover, it recommends utilizing the sustained vowel /i/ instead of /a/.

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Changes in Phonation and Their Relations with Progress of Parkinson’s Disease

Author: Galáž, Zoltán; Mekyska, Jiří; Zvončák, Vojtěch; Mucha, Ján; Kiska, Tomáš; Smékal, Zdeněk; Eliášová, Ilona; Mráčková, Martina; Košťálová, Miroslava; Rektorová, Irena; Faúndez Zanuy, Marcos; Alonso-Hernandez, Jesus; Gomez-Vilda, Pedro
Publisher: MDPI
Year: 2019
DOI: 10.3390/app8122339
Source: https://dspace.vut.cz/bitstreams/017fb49a-3ef8-4d47-9d27-7566dbb56a3a/download
applied
sciences
A icle
Changes in Phona ion and Thei Rela ions wi h
P og ess o Pa kinson’s Disease
Zol an Galaz 1, Ji i Mekyska 1, Voj ech Z oncak 1, Jan Mucha 1, Tomas Kiska 1,
Zdenek Smekal 1, Ilona Eliaso a 2,3, Ma ina M acko a 2,3, Milena Kos alo a 3,4,
I ena Rek o o a 2,3,*, Ma cos Faundez-Zanuy 5, Jesus B. Alonso-He nandez 6
and Ped o Gomez-Vilda 7
1Depa men o Telecommunica ions, B no Uni e si y o Technology, Technicka 10,
616 00 B no, Czech Republic; [email p o ec ed].cz (Z.G.); [email p o ec ed].cz (J.M.);
[email p o ec ed] (V.Z.); [email p o ec ed].cz (J.M.); [email p o ec ed].cz (T.K.);
[email p o ec ed].cz (Z.S.)
2Fi s Depa men o Neu ology, S . Anne’s Uni e si y Hospi al, Peka ska 53, 656 91 B no, Czech Republic;
[email p o ec ed] (I.E.); [email p o ec ed] (M.M.)
3Applied Neu oscience Resea ch G oup, Cen al Eu opean Ins i u e o Technology, Masa yk Uni e si y,
Kamenice 5, 625 00 B no, Czech Republic; [email p o ec ed]
4Depa men o Neu ology, Facul y Hospi al and Masa yk Uni e si y, Jihla ska 20,
639 00 B no, Czech Republic
5Escola Supe io Poli ecnica, Tecnocampus, A da. E nes Lluch 32, 083 02 Ma a o, Ba celona, Spain;
[email p o ec ed]
6Ins i u e o Technological De elopmen and Inno a ion in Communica ions (IDeTIC), Uni e si y o Las
Palmas de G an Cana ia, 35001 Las Palmas de G an Cana ia, Spain; [email p o ec ed]
7Neu omo phic P ocessing Labo a o y (NeuVox Lab), Cen e o Biomedical Technology, Uni e sidad
Poli ecnica de Mad id, Campus de Mon egancedo, s/n, Pozuelo de Ala con, 28223 Mad id, Spain;
[email p o ec ed]
*Co espondence: i ena. ek o [email p o ec ed]; Tel.: +420-543-182-639
Recei ed: 17 Oc obe 2018; Accep ed: 19 No embe 2018; Published: 22 No embe 2018
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Abs ac :
Hypokine ic dysa h ia, which is associa ed wi h Pa kinson’s disease (PD), a ec s se e al
speech dimensions, including phona ion. Al hough he scien i ic communi y has deal wi h
a quan i a i e analysis o phona ion in PD pa ien s, a complex esea ch e ealing p obable ela ions
be ween phona o y ea u es and p og ess o PD is missing. The e o e, he aim o his s udy is o
explo e hese ela ions and model hem ma hema ically o be able o es ima e p og ess o PD du ing
a wo-yea ollow-up. We en olled 51 PD pa ien s who we e assessed by h ee commonly used clinical
scales. In addi ion, we quan i ied eigh possible phona o y diso de s in i e owels. To iden i y
he ela ionship be ween baseline phona o y ea u es and changes in clinical sco es, we pe o med
a pa ial co ela ion analysis. Finally, we ained XGBoos models o p edic he changes in clinical
sco es du ing a wo-yea ollow-up. Fo wo yea s, he pa ien s’ oices became mo e ape iodic
wi h inc eased mic ope u ba ions o equency and ampli ude. Nex , he XGBoos models we e
able o p edic changes in clinical sco es wi h an e o in ange 11–26%. Al hough we iden i ied
some signi ican co ela ions be ween changes in phona o y ea u es and clinical sco es, hey a e
less in e p e able. This s udy sugges s ha i is possible o p edic he p og ess o PD based on he
acous ic analysis o phona ion. Mo eo e , i ecommends u ilizing he sus ained owel /i/ ins ead
o /a/.
Keywo ds:
phona ion; acous ic analysis; ollow-up s udy; hypokine ic dysa h ia; Pa kinson’s disease
Appl. Sci. 2018,8, 2339; doi:10.3390/app8122339 www.mdpi.com/jou nal/applsci
Appl. Sci. 2018,8, 2339 2 o 18
1. In oduc ion
Pa kinson’s disease (PD) is a equen neu odegene a i e diso de ha is associa ed wi h
a subs an ial educ ion o dopamine gic neu ons especially in subs ancia nig a pa s compac a [
1
].
The p ima y mo o symp oms o PD comp ise emo a es , muscula igidi y, b adykinesia, and
pos u al ins abili y [
1
]. Pa ien s wi h PD also de elop a a ie y o non-mo o symp oms [
2
] such
as sleep dis u bances, dep ession, cogni i e impai men , e c. To diagnose, a e and moni o mo o
and non-mo o symp oms o PD, a ious clinical a ing scales such as Uni ied Pa kinson’s Disease
Ra ing Scale (UPDRS) [
3
], F eezing O Gai Ques ionnai e (FOG-Q) [
4
], o Addenb ooke’s Cogni i e
Examina ion-Re ised (ACE–R) [
5
] ha e been de eloped. Ne e heless, eliabili y o he assessmen is
o en educed by in e - a e a iabili y [6].
Up o 90% [
7
] o pa ien s wi h PD de elop a mul i-dimensional speech diso de named
hypokine ic dysa h ia (HD) [
8
], which is mani es ed in phona ion, a icula ion, and p osody [
9
–
11
].
In he a ea o phona ion, insu icien b ea h suppo , educ ion in phona ion ime, inc eased acous ic
noise, ins abili y o a icula o y o gans, mic ope u ba ions o equency/ampli ude, and ha sh b ea hy
oice quali y has been obse ed [
9
,
12
]. HD leads o se ious complica ions in daily communica ion o
pa ien s wi h PD [13]. Gene ally, HD was ound o be mo e se e e in he ad anced s ages o PD [14].
As epo ed by he ecen s udies, acous ic analysis o HD can p o ide clinicians wi h
non-in asi e and eliable me hodology o PD diagnosis, assessmen and moni o ing [
9
,
15
]. Mo eo e ,
his me hodology has also been used o moni o he e iciency o PD ea men [
10
,
16
–
18
]. In he ield
o acous ic analysis o PD phona ion, he au ho s mos ly ocused on he sus ained owel /a/ [
9
].
Con en ional phona o y ea u es such as ji e , shimme , ha monic- o-noise a io, deg ee o un oiced
segmen s, and o man -based pa ame e s ex ac ed om his owel ha e been widely used o diagnose
PD [
12
,
19
–
23
]. Al hough Hazan e al. [
24
] employed analysis o sus ained phona ion o diagnosis
o PD e en in i s ea ly s age, based on he ecen e iew [
9
], mos o he esea che s ind ele an
applica ions o he phona o y analysis especially in mode a e o se e e s ages o his diso de .
Fo example, he analysis o sus ained phona ion has been u ilized du ing PD se e i y assessmen .
In 2010, Tsanas e al. [
15
] en olled 42 PD pa ien s and pa ame e ized hei sus ained phona ion o
owel /a/ by a se o con en ional ea u es ha we e consequen ly mapped o UPDRS, pa III (mo o
examina ion) and he o al sco e o his scale. Using classi ica ion and eg ession ees, hey es ima ed
he UPDRSIII sco e wi h MAE (mean absolu e e o ) equal o 5.95. The o al UPDRS sco e was
es ima ed wi h
MAE =
7.52. A pa ame ic e sion o his da ase has been made a ailable o esea ch
pu poses and o he esea ch eams u he dec eased he es ima ion e o [
25
–
27
]. Ano he wo k ha
deals wi h he au oma ic clinical sco es es ima ion was published by Mekyska e al. [
21
]. In his s udy,
hey acqui ed sus ained phona ion o owels /a/, /e/, /i/, /o/, /u/ in 84 PD pa ien s. Modeling
con en ional and ad anced ea u es by andom o es s p o ided he es ima ion o UPDRSIII wi h
MAE =
5.70. In addi ion, he au ho s es ima ed se e al o he clinical sco es such as UPDRS, pa IV
(complica ions o he apy) wi h MAE =1.30 o Beck dep ession in en o y (BDI) wi h MAE =3.12.
E en hough HD is one o he mos p oblema ic aspec s o PD, he numbe o longi udinal
s udies in es iga ing he e olu ion o HD in PD o e ime (based on he acous ic analysis) is e y
limi ed [
28
–
31
]. I we ocus speci ically on longi udinal moni o ing o sus ained phona ion, hen, in ac ,
we can iden i y only one s udy, which is published by Skodda e al. [
31
]. In his wo k, he au ho s
epea edly (wi h a e age ime in e al 32.50 mon hs) acqui ed sus ained owel /a/ in 32 emale and
48 male PD pa ien s (age in session 1: 66.28
±
8.11 yea s; PD du a ion in session 1: 6.10
±
4.63 yea s;
UPDRSIII in session 1: 20.16 ±10.96; UPDRS III in session 2: 19.58 ±8.29). The oice was quan i ied
by ji e , shimme , noise- o-ha monic a io, and mean undamen al equency. Based on he pai ed
- es , he au ho s iden i ied signi ican changes in shimme and noise- o-ha monic a io. In bo h
cases, he alues o hese pa ame e s inc eased. Ano he in e es ing inding is ha , al hough some
phona o y ea u es signi ican ly changed, UPDRS III was held widely s able o e ime. The au ho s
p o ide wo possible explana ions: (1) oice impai men could be he esul o an escala ion o axial
dys unc ion oo sub le o be mi o ed by UPDRSIII; (2) al e a ions o speech pa ame e s could be
Appl. Sci. 2018,8, 2339 3 o 18
comple ely independen o mo o pe o mance ha may be based upon non-dopamine gic mechanisms.
Inconsis encies in e ms o he L-dopa e ec on HD a e u he discussed in B abenec e al. [9].
To sum i up, al hough he scien i ic communi y equen ly add esses phona ion in associa ion
wi h HD (especially when diagnosing o assessing PD), o he bes o ou knowledge, he e is only one
s udy ha ocuses on HD phona o y diso de s om a longi udinal pe spec i e. Mo eo e , he wo k
deals wi h he analysis o phona ion jus pa ially, i conside s only he sus ained owel /a/, and i
does no explo e a possibili y o PD p og ess p edic ion based on a combina ion o acous ic analysis
and machine lea ning. The e o e, in he ame o ou wo-yea ollow-up s udy, we a e going much
u he wi h he ollowing aims:
1. o iden i y phona o y acous ic ea u es a baseline ha a e signi ican ly co ela ed wi h changes
in a ious clinical a ing scales,
2.
o in es iga e ela ionship be ween changes in he phona o y acous ic ea u es and he clinical
a ing scales a e he wo-yea ollow-up,
3. o es ablish ma hema ical models ha will es ima e he change in clinical a ing scales based on
he change in acous ic measu es,
4. o compa e esul s based on i e owels: /a/, /e/, /i/, /o/, /u/.
The es o his a icle is o ganized as ollows: Sec ion 2desc ibes a da ase o PD pa ien s as well
as me hodology in e ms o acous ic analysis, s a is ical analysis and machine lea ning. Resul s a e
epo ed in Sec ion 3and consequen ly discussed in Sec ion 5. Finally, conclusions a e gi en in
Sec ion 4.
2. Ma e ials and Me hods
2.1. Da ase
In his wo k, we en olled 51 pa ien s wi h idiopa hic PD. All o hem a e Czech na i e speake s
(17 emales and 34 males; age: 65.47
±
7.46 yea s; PD du a ion: 7.61
±
4.01 yea s; mean LED (L-dopa
equi alen daily dose) [
32
]: 1033.67
±
567.96 mg/day) a he Fi s Depa men o Neu ology, S . Anne’s
Uni e si y Hospi al in B no, Czech Republic. A e wo yea s, he pa ien s we e e-examined (age:
67.61
±
7.38 yea s; PD du a ion: 9.57
±
4.50 yea s; mean LED: 1115.11
±
484.38 mg/day). All pa ien s
signed an in o med consen o m ha has been app o ed (including he s udy) in 14 Ma ch 2016 by
he Resea ch E hics Commi ee o Masa yk Uni e si y ( e . no.: EKV-2016-004, p ojec i le: E ec s
o non-in asi e b ain s imula ion on hypokine ic dysa h ia, mic og aphia, and b ain plas ici y in
pa ien s wi h Pa kinson’s disease, in es iga o : P o . MD. I ena Rek o o a, PhD.).
None o he pa ien s had a disease a ec ing he cen al ne ous sys em o he han PD. All pa ien s
we e examined on hei egula dopamine gic medica ion app oxima ely 1 h a e he L-dopa [
32
]
dose. The ollowing a ing scales we e used o e alua e he clinical symp oms o PD: UPDRSIII
and UPDRSIV [
3
], FOG-Q [
4
], REM sleep beha io diso de sc eening ques ionnai e (RBDSQ) [
33
],
and ACE-R [
5
]. The ull clinical cha ac e is ics o he da ase , ie., mean
±
sd alues o he clinical
a ing scales in session 1, session 2, and session
∆
(
session 2 −session 1
) can be seen in Table 1.
Mo eo e , o iden i y s a is ically signi ican di e ences, he able epo s p- alues o he Wilcoxon
signed- ank es be ween he da a acqui ed in session 1 (baseline examina ion) and session 2 ( wo-yea
ollow-up examina ion) oo.
The clinical da a om he
∆
session we e also used o gene a e desc ip i e isualiza ions
(i.e., his og ams, eg ession and esidual plo s) o he change in selec ed clinical a ing scales,
mo e speci ically: LED, UPDRS III, UPDRSIV, FOG-Q, RBDSQ, ACE-R, see Figu e 1. Wi h his app oach,
i is possible o assess he imp o emen and/o decline in mo o and non-mo o de ici s associa ed
wi h PD in he ho izon o wo yea s as well as a ela ionship be ween he change in each o he scales
ela i e o o he scales in he selec ed se .
Appl. Sci. 2018,8, 2339 4 o 18
Table 1. Clinical cha ac e is ics o he pa ien s.
Scale Mean ±sd (s1) Mean ±sd (s2) Mean ±sd (∆)p(Wilcoxon)
LED 917.61 ±544.78 1129.92 ±477.50 212.31 ± −67.28 0.188
UPDRSIII 22.49 ±13.47 27.45 ±12.68 4.96 ± −0.79 0.000
UPDRSIV 2.82 ±2.58 3.44 ±2.94 0.62 ±0.36 0.632
FOG-Q 6.57 ±5.40 8.33 ±5.97 1.76 ±0.57 0.000
RBDSQ 3.98 ±3.25 3.78 ±2.28 −0.2 ± −0.98 0.522
ACE-R 87.92 ±7.62 85.89 ±9.48 −2.03 ±1.86 0.000
s1— i s session; s2—second session;
∆
—del a session (
session 2 −session 1
); p(Wilcoxon) — p- alue
o Wilcoxon signed- ank es (pai ed samples); LED—L-dopa equi alen daily dose (mg/day) [
32
];
UPDRSIII—Uni ied Pa kinson’s Disease Ra ing Scale, pa III: e alua ion o mo o unc ion [
3
],
UPDRSIV—Uni ied Pa kinson’s Disease Ra ing Scale, pa IV: e alua ion o complica ions o
he apy [
3
]; FOG-Q—F eezing o gai ques ionnai e [
4
]; RBDSQ—The REM sleep beha io diso de
sc eening ques ionnai e [33]; ACE-R—Addenb ooke’s Cogni i e Examina ion-Re ised [5].
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Figu e 1.
Desc ip i e s a is ical g aphs o clinical cha ac e is ics o he PD pa ien da ase : on he
main diagonal, his og ams a e isualized. Nex , he uppe iangula pa o he g aph-g id shows
sca e plo s wi h he i ed lines o linea eg ession models. Finally, he lowe iangula pa o he
g aph-g id is used o display esiduals o he models shown in he uppe g id. Colo no a ion: he blue
colo ep esen s da a o session 1, and he g een colo ep esen s da a o session 2.
Appl. Sci. 2018,8, 2339 5 o 18
2.2. Vocal Tasks
To quan i y he de e io a ion o phona ion in pa ien s wi h PD, we used a sus ained phona ion
o owels: /a/, /e/, /i/, /o/, /u/ as a basis o ou expe imen s. The eason behind using all o
he i e owels is o employ he analysis wi h he emphasis on quan i ying all posi ions o a ongue
du ing phona ion. Fo mo e in o ma ion, see he Hellwag ( owel) iangle [
34
]. In ou iew, using
only a sus ained phona ion o he owel /a/ is no ully jus i ied as he e is e y li le o no eason
o assume ha his pa icula posi ion o he ongue can p o ide mo e in o ma ion abou phona o y
diso de s. In ac , as shown by p e ious s udies, he analysis o o he owels is impo an o a mo e
obus desc ip ion o HD [19–21,23,24,35–37].
Sus ained phona ion o a owel is a s anda d measu e used o assess quali y o phona ion [
9
].
Du ing his pa icula ocal ask, a speake is asked o sus ain phona ion o a owel, a emp ing o
main ain s eady equency and ampli ude a a com o able le el [
38
]. The ad an age o his ask
in compa ison wi h o he commonly used ocal asks is i s independence o a icula o y and o he
linguis ic con ounds [
38
]. Mo eo e , i is also p esen in mos o he da abases and he e o e he
expe imen s p oposed in ou wo k a e compa able wi h o he commonly used da abases [39,40].
The sus ained phona ion ask used in his s udy is a pa o a speech acquisi ion p o ocol de i ed
om he s anda dized 3F Dysa h ia P o ile [
41
]. Du ing he da a acquisi ion, a la ge capsule ca dioid
mic ophone M-AUDIO No a (Cumbe land, RI, Uni ed S a es) moun ed o a boom a m RODE PSA1
(Sil e wa e , Aus alia) and posi ioned a a dis ance o app oxima ely 20cm om he pa ien ’s
mou h was used o he eco ding. Consequen ly, he signals we e digi ized by audio in e ace
M-AUDIO Fas T ack P o (Cumbe land, RI, Uni ed S a es) wi h he sampling equency o 48kHz
(16-bi esolu ion) and checked by a ained acous ic enginee wi hou ha ing seen he pa ien ’s clinical
da a. Finally, he signals we e pa ame e ized using P aa [
42
] so wa e as well as a se o MATLAB
(MATLAB 9.4, Ma hWo ks, Na ick, MA, Uni ed S a es) pa ame iza ion unc ions [
43
] de eloped a
he B no Uni e si y o Technology.
2.3. Acous ic Fea u es
To desc ibe a a ie y o phona o y diso de s associa ed wi h HD, we quan i ied he
ollowing: (a) mic ope u ba ions in equency o oice using pe iod pe u ba ion quo ien (PPQ);
(b) mic ope u ba ions in in ensi y o oice using ampli ude pe u ba ion quo ien (APQ); (c) i egula
pi ch luc ua ions using coe icien o a ia ion o undamen al equency (F0 (CV)); (d) i egula
ampli ude luc ua ions using coe icien o a ia ion o Teage –Kaise ope a o (TKEO (CV)); (e) emo
o a icula o y o gans (such as jaw, ongue and lips), coe icien o a ia ion o 1s o man (F1 (CV)),
coe icien o a ia ion o 2nd o man (F2 (CV)), coe icien o a ia ion o 3 d o man (F3 (CV));
( ) inc eased acous ic noise using median o ha monic- o-noise a io (HNR (Q2)), median o ene gy
a io (ER (Q2), ene gy a io o bands 2000–4000Hz and 70–900Hz)), median o glo al- o-noise
exci a ion a io (GNE (Q2)), median o no malized noise ene gy (NNE (Q2)); (g) i egula acous ic
noise luc ua ions using s anda d de ia ion o ha monic- o-noise a io (HNR (SD)), coe icien o
a ia ion o ene gy a io (ER (CV)), s anda d de ia ion o glo al- o-noise exci a ion a io (GNE (SD)),
s anda d de ia ion o no malized noise ene gy (NNE (SD)); and (h) ape iodici y o oice using ac ion
o locally un oiced ames (FLUF). All o hese ea u es a e s anda d and clinically in e p e able
dysphonic measu es and we e selec ed based on a ecommenda ion gi en in ou ecen e iew on
acous ic analysis o oice/speech signals in pa ien s su e ing om HD [
9
]. Fo mo e in o ma ion
abou he oice/speech pa ame iza ion, see [43].
2.4. S a is ical Analysis
Be o e desc ibing he analy ical se up applied in his wo k, i is impo an o men ion ha he
da ase did no con ain any missing alues, and he e o e all da a samples we e used. Fu he mo e,
e en hough we used six clinical a ing scales when desc ibing he da ase (see Sec ion 2.1), only ou

Appl. Sci. 2018,8, 2339 6 o 18
o hese scales we e used o he analysis, speci ically: UPDRSIII, UPDRS IV, RBDSQ, and FOG-Q.
The eason is ha p e ious s udies ha e al eady shown ha non-mo o mani es a ions o PD a e
no linked wi h he phona o y aspec s o HD, bu a he wi h he impai men s o p osody and
a icula ion [
44
] ha a e commonly being quan i ied using a sen ence eading ask, ee speech
(monologue), e c. Since his s udy is ocused on he phona o y aspec s o HD, clinical a ing scales
desc ibing only mo o symp oms o PD we e used.
To e eal and assess he s eng h o a ela ionship be ween he compu ed acous ic ea u es and
pa ien s’ clinical da a (UPDRSIII, UPDRSIV, RBDSQ, and FOG-Q), Spea man’s co ela ion coe icien
was compu ed ( he s a is ical assump ions o Spea man’s co ela ion coe icien we e sa is ied as:
(a) he acous ic ea u es as well as he he clinical da a a e bo h a iables ha a e measu ed on a
leas an o dinal scale, and (b) he e is a mono onic ela ionship be ween he wo a iables). Since age,
gende , and p obably L-dopa, a e mani es ed in a oice o PD pa ien s [
9
], o he pu pose o his wo k,
we employed pa ial Spea man’s co ela ion con olling o he e ec o he ollowing con ounding
ac o s (also known as co a ia es): pa ien s’ age, gende [
29
,
45
], and dopamine gic medica ion [
32
,
46
].
The signi icance le el o co ela ion was se o 0.05. Mo e speci ically, wo co ela ion scena ios we e
conside ed: (a) co ela ion be ween he acous ic ea u es a he baseline and he change in alues
o he selec ed clinical a ing scales, and (b) co ela ion be ween he change in he acous ic ea u es
and he change in he alues o he selec ed clinical a ing scales. Wi h his app oach, we aimed
a iden i ying hose acous ic ea u es ha a e signi ican ly co ela ed wi h he speci ic mo o and
non-mo o symp oms assessed by he selec ed clinical a ing scales in bo h scena ios.
Nex , o e alua e he powe o he acous ic ea u es a he baseline o p edic he change o he
pa ien s’ clinical da a in he ho izon o wo yea s, we used he acous ic ea u es compu ed o he
eco dings acqui ed in session 1 (baseline examina ion) and buil ma hema ical models p edic ing
he change in he selec ed clinical a ing scales (
∆
). Fo his pu pose, we employed G adien Boos ed
T ees (mo e speci ically, he amous XGBoos algo i hm [
47
]) in a supe ised lea ning se up: 10- old
c oss- alida ion wi h 20 epe i ions [
48
]. The XGBoos algo i hm belongs o he s a e-o - he-a in
machine lea ning, which is suppo ed by he ac ha i has been ecen ly used o win compe i ions on
Kaggle. I wo ks well e en on small da ase s (whe e i ou pe o ms deep lea ning app oaches), i is
obus o ou lie s and i is able o model complex in e dependencies. Fo hese easons, i has been
used by many esea che s in a ious biomedical ields, e.g., [49–51], e c.
The pe o mance o he models (p ecision o he p edic ions) was e alua ed by MAE and
es ima ion e o a e (EER). These measu es a e de ined as:
MAE =1
n
n
∑
i=1
|yi−ˆ
yi|,
EER =1
n·
n
∑
i=1
|yi−ˆ
yi| · 100 [%],
whe e
yi
s ands o he ue label o
i
- h obse a ion,
ˆ
yi
ep esen s he p edic ed label o he
i
- h
obse a ion,
n
deno es he numbe o obse a ions, and inally
s ands o he ange o alues in he
p edic ed clinical a ing scale (no he ange ha can be heo e ically eached, bu he ac ual ange o
he alues in he da ase ). As can be seen, EER he e o e desc ibes a pe cen age o e o p edic ions
wi h espec o s a is ical p ope ies o he da ase , which is pa icula ly use ul o easy in e p e a ion
o he esul s.
3. Resul s
The alues o 16 acous ic ea u es ex ac ed om bo h sessions, as well as alues o hei di e ences
(session 2
−
session 1), a e epo ed in Table 2. Based on he Wilcoxon signed- ank es , we can obse e
ha none o he ea u es ex ac ed om owel /a/ signi ican ly changed a e wo yea s. Rega ding
owel /e/, we iden i ied signi ican ly inc eased mic ope u ba ions in in ensi y o oice and also
Appl. Sci. 2018,8, 2339 7 o 18
inc eased ape iodici y. The same signi ican changes we e iden i ied in owel /i/ and /u/. In he
case o owel /u/, in addi ion, we moni o ed he inc ease o mic ope u ba ions in equency o oice.
The epea ed acquisi ion o owel /o/ was associa ed wi h inc eased ape iodici y and mo e dominan
mic ope u ba ions in equency o oice.
Table 2. S a is ical desc ip ion o acous ic ea u es o all ocal asks.
Fea u e Mean ±sd (s1) Mean ±sd (s2) Mean ±sd (∆)p(Wilcoxon)
owel /a/
PPQ 1.31 ±1.28 1.89 ±2.52 0.58 ±1.24 0.069
APQ 10.69 ±4.23 12.81 ±6.66 2.12 ±2.42 0.063
FLUF 3.87 ±5.28 4.77 ±5.61 0.90 ±0.32 0.386
HNR (Q2) 13.35 ±2.90 12.81 ±3.73 −0.54 ±0.83 0.390
HNR (SD) 4.17 ±0.86 4.18 ±0.89 0.02 ±0.03 0.928
F1 (CV) 0.15 ±0.06 0.18 ±0.10 0.02 ±0.04 0.180
F2 (CV) 0.22 ±0.15 0.23 ±0.15 0.00 ±0.00 0.913
F3 (CV) 8.25 ±40.44 4.50 ±21.67 −3.75 ± −18.77 0.575
ER (Q2) 6.98 ±33.97 7.40 ±36.43 0.42 ±2.46 0.954
ER (CV) 0.57 ±0.26 0.57 ±0.30 0.01 ±0.05 0.880
F0 (CV) 0.30 ±0.74 0.36 ±1.15 0.06 ±0.41 0.763
GNE (Q2) −0.46 ±1.85 −0.46 ±1.85 0.00 ± −0.00 0.997
GNE (SD) 0.23 ±0.74 0.30 ±0.97 0.07 ±0.23 0.679
TEO (CV) −0.34 ±1.71 −0.31 ±1.75 0.03 ±0.04 0.931
NNE (Q2) −1.45 ±7.41 −1.33 ±7.08 0.13 ± −0.34 0.932
NNE (SD) 1.80 ±0.76 1.79 ±0.78 −0.01 ±0.02 0.955
owel /e/
PPQ 1.31 ±1.17 1.80 ±3.06 0.50 ±1.89 0.269
APQ 11.21 ±6.82 15.05 ±9.95 3.84 ±3.13 0.036
FLUF 2.62 ±3.58 5.31 ±6.02 2.69 ±2.44 0.007
HNR (Q2) 14.36 ±3.92 13.75 ±4.40 −0.61 ±0.48 0.394
HNR (SD) 4.19 ±0.96 4.32 ±1.18 0.13 ±0.21 0.533
F1 (CV) 0.62 ±0.23 0.56 ±0.24 −0.05 ±0.01 0.173
F2 (CV) 0.19 ±0.07 0.19 ±0.09 −0.00 ±0.02 0.965
F3 (CV) 12.41 ±86.28 7.06 ±48.94 −5.36 ± −37.34 0.709
ER (Q2) 3.46 ±23.30 3.39 ±22.83 −0.07 ± −0.47 0.989
ER (CV) 0.59 ±0.28 0.61 ±0.37 0.02 ±0.10 0.702
F0 (CV) 0.42 ±1.47 0.19 ±0.50 −0.24 ± −0.97 0.293
GNE (Q2) −0.36 ±1.77 −0.17 ±1.18 0.19 ± −0.59 0.536
GNE (SD) 0.08 ±0.36 0.06 ±0.30 −0.02 ± −0.07 0.726
TEO (CV) −0.07 ±0.50 −0.19 ±1.31 −0.11 ±0.80 0.571
NNE (Q2) −0.19 ±1.35 −0.21 ±1.44 −0.01 ±0.10 0.961
NNE (SD) 1.67 ±0.56 1.83 ±0.61 0.17 ±0.05 0.055
owel /i/
PPQ 1.26 ±1.68 1.92 ±3.08 0.66 ±1.40 0.196
APQ 10.49 ±5.31 14.83 ±9.65 4.35 ±4.34 0.005
FLUF 2.13 ±3.73 4.60 ±6.89 2.46 ±3.15 0.013
HNR (Q2) 17.16 ±3.38 16.17 ±5.32 −0.98 ±1.95 0.212
HNR (SD) 4.51 ±1.12 4.53 ±1.40 0.02 ±0.28 0.921
F1 (CV) 0.67 ±0.48 0.58 ±0.40 −0.09 ± −0.08 0.170
F2 (CV) 0.14 ±0.07 0.16 ±0.08 0.02 ±0.00 0.088
F3 (CV) 0.09 ±0.21 38.22 ±207.82 38.14 ±207.61 0.205
ER (Q2) 0.09 ±0.08 8.35 ±33.15 8.27 ±33.07 0.087
ER (CV) 0.61 ±0.37 0.56 ±0.44 −0.05 ±0.07 0.490
F0 (CV) 0.36 ±1.39 0.35 ±1.17 −0.01 ± −0.22 0.961
GNE (Q2) −0.30 ±1.49 −0.30 ±1.48 0.01 ± −0.01 0.980
GNE (SD) 0.07 ±0.32 0.12 ±0.40 0.06 ±0.08 0.449
TEO (CV) 0.78 ±0.55 0.36 ±2.47 −0.42 ±2.47 0.238
NNE (Q2) −0.01 ±0.18 −0.20 ±11.53 −0.19 ±1.15 0.228
NNE (SD) 1.44 ±0.55 1.40 ±0.70 −0.05 ±0.15 0.727
Appl. Sci. 2018,8, 2339 8 o 18
Table 2. Con .
Fea u e Mean ±sd (s1) Mean ±sd (s2) Mean ±sd (∆)p(Wilcoxon)
owel /o/
PPQ 1.14 ±1.06 1.68 ±2.06 0.54 ±0.99 0.047
APQ 11.09 ±4.41 14.16 ±9.94 3.06 ±5.53 0.051
FLUF 2.64 ±4.32 5.63 ±7.24 2.99 ±2.91 0.008
HNR (Q2) 15.49 ±3.30 15.28 ±4.79 −0.22 ±1.49 0.773
HNR (SD) 4.93 ±1.14 4.57 ±1.36 −0.36 ±0.21 0.149
F1 (CV) 0.24 ±0.19 0.31 ±0.22 0.06 ±0.03 0.091
F2 (CV) 0.14 ±0.10 0.14 ±0.10 0.00 ±0.01 0.867
F3 (CV) 8.75 ±35.36 23.86 ±96.34 15.11 ±60.97 0.317
ER (Q2) 8.17 ±32.52 8.07 ±32.42 −0.10 ± −0.10 0.989
ER (CV) 0.64 ±0.39 0.61 ±0.36 −0.03 ± −0.02 0.705
F0 (CV) 0.40 ±0.91 0.63 ±1.81 0.24 ±0.89 0.434
GNE (Q2) −0.91 ±2.72 −1.25 ±3.11 −0.35 ±0.39 0.582
GNE (SD) 0.30 ±0.75 0.39 ±0.90 0.09 ±0.15 0.580
TEO (CV) −0.74 ±3.27 −0.28 ±1.30 0.46 ± −1.97 0.376
NNE (Q2) −0.19 ±0.79 −0.11 ±0.47 0.09 ± −0.31 0.530
NNE (SD) 1.62 ±0.83 1.58 ±0.91 −0.04 ±0.08 0.843
owel /u/
PPQ 1.35 ±1.17 2.60 ±3.07 1.26 ±1.90 0.009
APQ 12.66 ±5.60 17.03 ±9.50 4.37 ±3.91 0.007
FLUF 2.77 ±5.13 8.52 ±9.83 5.75 ±4.69 0.001
HNR (Q2) 15.28 ±4.23 14.32 ±5.22 −0.96 ±0.99 0.270
HNR (SD) 5.40 ±1.56 5.08 ±1.46 −0.32 ± −0.10 0.252
F1 (CV) 0.69 ±0.44 0.71 ±0.34 0.03 ± −0.10 0.667
F2 (CV) 0.17 ±0.09 0.18 ±0.09 0.01 ± −0.00 0.468
F3 (CV) 10.28 ±52.21 15.04 ±104.80 4.76 ±52.58 0.779
ER (Q2) 8.27 ±33.82 3.63 ±25.29 −4.64 ± −8.53 0.453
ER (CV) 0.67 ±0.39 0.74 ±0.43 0.06 ±0.04 0.431
F0 (CV) 0.23 ±0.67 0.18 ±0.10 −0.05 ± −0.57 0.586
GNE (Q2) −0.19 ±1.31 0.00 ±0.00 0.19 ± −1.31 0.323
GNE (SD) 0.09 ±0.40 0.10 ±0.70 0.01 ±0.30 0.966
TEO (CV) −0.51 ±2.69 −0.07 ±0.51 0.43 ± −2.18 0.275
NNE (Q2) −1.27 ±7.09 −0.31 ±2.190 0.96 ± −4.91 0.373
NNE (SD) 1.57 ±0.73 1.68 ±0.49 0.11 ± −0.24 0.379
The esul s o Spea man’s pa ial co ela ion be ween he baseline acous ic ea u es (session 1)
and change in clinical da a (
∆
) can be seen in Table 3. None o he ea u es signi ican ly co ela ed
wi h UPDRS, pa III. On he o he hand, in he case o pa IV, we can obse e nega i e co ela ion
wi h ape iodici y (FLUF, owels /e/, /i/, /o/, /u/), i.e., low ape iodici y a he baseline esul ed in
inc eased complica ions wi h he apy. Simila ly, we iden i ied nega i e co ela ion wi h emo o jaw
(F2 (CV), owel /a/), bu posi i e co ela ion wi h he emo o lips (F3 (CV), owel /o/). Ano he
posi i e co ela ions we e obse ed wi h median o ene gy a io ( owels /o/, /u/), i egula pi ch
luc ua ions (F0 (CV), owel /a/), and a iabili y o oice quali y (GNE (SD), owel /a/). Change
in UPDRSIV nega i ely co ela ed wi h i egula ampli ude luc ua ions (TEO (CV), owel /u/),
acous ic noise (NNE (Q2), owel /u/) and i s a ia ion (NNE (SD), owel /a/). Resul s linked wi h
he acous ic noise quan i ied by he median GNE a e no consis en .
RBDSQ signi ican ly and posi i ely co ela ed wi h mic ope u ba ions in equency o oice (PPQ,
owel /u/) and mic ope u ba ions o i s in ensi y (APQ, owel /a/), i.e., inc eased mic ope u ba ions
in equency/ampli ude a he baseline esul ed in de e io a ion o sleep. In addi ion, RBDSQ
nega i ely co ela ed wi h he a ia ion o oice quali y (HNR (SD), owel /o/).
Rega ding gai di icul ies, as assessed by FOG-Q, we can obse e wo posi i e co ela ions wi h
emo o jaw (F1 (CV), owel /i/) and i egula pi ch luc ua ions (F0 (CV), owel /a/). The o al sco e
o his ques ionnai e nega i ely co ela es wi h a ia ion o acous ic noise (NNE (SD), owel /o/).
Appl. Sci. 2018,8, 2339 9 o 18
Table 3. Spea man’s co ela ion coe icien s be ween baseline acous ic ea u es and ∆o clinical da a.
Fea u e /a/ /e/ /i/ /o/ /u/ /a/ /e/ /i/ /o/ /u/
UPDRSIII UPDRSIV
PPQ −0.07 −0.08 0.26 −0.09 −0.10 −0.11 −0.26 −0.08 −0.17 −0.08
APQ −0.06 −0.05 0.17 −0.10 −0.09 0.08 0.12 −0.01 0.06 −0.09
FLUF 0.10 0.08 0.11 0.10 0.16 −0.23 −0.47 ** −0.33 * −0.34 * −0.32 *
HNR (Q2) 0.16 0.07 −0.05 0.17 0.09 −0.02 −0.08 0.07 0.11 0.16
HNR (SD) 0.10 0.11 −0.04 −0.05 −0.15 0.07 −0.02 0.20 −0.22 −0.09
F1 (CV) 0.04 0.10 −0.17 −0.02 0.19 −0.27 −0.07 0.08 −0.32 * 0.08
F2 (CV) −0.15 0.20 −0.10 −0.11 0.11 −0.37 * −0.11 −0.12 −0.23 0.04
F3 (CV) −0.24 0.25 −0.23 −0.17 0.11 0.22 0.28 0.10 0.32 * 0.10
ER (Q2) −0.25 0.25 −0.14 −0.17 0.17 0.16 0.28 0.12 0.34 * 0.32 *
ER (CV) 0.12 −0.09 0.22 −0.03 0.11 −0.17 −0.14 −0.22 −0.18 −0.06
F0 (CV) 0.28 −0.12 0.04 −0.08 0.17 0.33 * −0.04 −0.24 −0.16 −0.21
GNE (Q2) −0.14 0.11 −0.15 0.06 −0.17 −0.35 * 0.25 0.15 0.27 0.33 *
GNE (SD) −0.16 −0.08 −0.12 −0.22 0.24 0.30 * −0.01 −0.04 0.22 0.11
TEO (CV) 0.28 −0.25 0.11 0.15 −0.25 −0.23 −0.28 −0.28 −0.23 −0.30 *
NNE (Q2) 0.28 −0.25 −0.09 0.14 −0.23 −0.15 −0.28 −0.22 −0.26 −0.31 *
NNE (SD) 0.09 −0.25 0.12 0.11 −0.26 −0.43 ** −0.17 −0.28 −0.12 −0.12
RBDSQ FOG-Q
PPQ 0.15 0.11 0.21 −0.13 0.33 * −0.20 −0.09 0.15 −0.09 0.08
APQ 0.29 * 0.27 0.21 0.27 0.20 −0.18 −0.14 −0.16 −0.16 −0.12
FLUF −0.06 0.06 −0.22 −0.17 −0.24 0.20 0.15 0.13 0.17 0.23
HNR (Q2) −0.20 −0.17 −0.19 −0.27 −0.20 0.09 0.03 −0.03 0.09 −0.05
HNR (SD) −0.17 −0.16 0.21 −0.36 * −0.27 0.07 0.24 0.21 0.18 0.12
F1 (CV) 0.08 −0.02 0.24 0.09 0.11 0.16 −0.22 0.33 * −0.20 −0.20
F2 (CV) −0.08 −0.09 −0.26 −0.17 −0.27 0.18 −0.09 −0.03 −0.13 0.26
F3 (CV) −0.10 −0.04 −0.11 0.07 −0.08 0.03 0.22 0.14 0.08 −0.11
ER (Q2) −0.19 −0.21 −0.26 −0.12 −0.16 −0.13 0.04 0.25 0.10 −0.05
ER (CV) 0.08 0.28 0.20 −0.28 −0.11 0.04 −0.13 −0.11 0.10 0.06
F0 (CV) 0.21 0.13 0.19 0.25 0.10 0.37 * 0.20 −0.03 −0.10 0.19
GNE (Q2) −0.16 −0.17 −0.28 −0.18 −0.16 −0.29 −0.25 0.05 −0.19 −0.19
GNE (SD) −0.05 −0.09 −0.25 0.09 −0.20 0.08 0.14 −0.05 0.12 0.15
TEO (CV) 0.05 0.04 0.27 −0.17 0.15 −0.05 −0.22 −0.07 −0.25 −0.01
NNE (Q2) 0.24 0.28 0.18 0.20 0.21 −0.04 0.21 0.17 0.16 0.20
NNE (SD) −0.27 −0.05 −0.19 −0.16 0.11 −0.23 −0.12 0.16 −0.22 ** 0.05
*—
p
- alue o Spea man’s co ela ion coe icien <0.05; **—
p
- alue o Spea man’s co ela ion
coe icien <0.01.
The esul s o Spea man’s pa ial co ela ion be ween he change o baseline acous ic ea u es
(
∆
) and he change in clinical da a (
∆
) can be seen in Table 4. Rega ding he change o UPDRSIII,
i nega i ely co ela ed wi h he change o mic ope u ba ions in equency o oice (PPQ, owel /i/),
ape iodici y (FLUF, owels /e/, /o/), emo o ongue (F1 (CV), owels /a/, /u/), emo o jaw (F2
(CV), owel /e/), i egula pi ch luc ua ions (F0 (CV), owels /a/, /u/), and a ia ion o acous ic
noise (NNE (SD), owel /i/). Signi ican posi i e co ela ions we e iden i ied wi h he change o lips
emo (F3 (CV), owel /a/), acous ic noise (ER (Q2), owel /a/), and a ia ion o oice quali y (GNE
(SD), owel /e/).
In he case o UPDRSIV, we iden i ied se en signi ican posi i e co ela ions wi h he change
o mic ope u ba ions in equency o oice (PPQ, owel /e/), emo o jaw (F2 (CV), owel /a/),
i egula ampli ude luc ua ions (TEO (CV), owels /a/, /u/), and acous ic noise (NNE (Q2), owels
/o/, /u/). The change in UPDRS IV signi ican ly nega i ely co ela ed wi h he change o acous ic
noise (ER (Q2), owel /u/), and i s a ia ion (ER (CV), owel /e/).
Changes in RBDSQ signi ican ly nega i ely co ela ed wi h he change o mic ope u ba ions
in equency o oice (PPQ, owel /u/), mic ope u ba ions o i s in ensi y (APQ, owels /e/, /i/,
/u/), emo o lips (F3 (CV), owel /o/), acous ic noise (NNE (Q2), owel /e/), and i s a ia ion (ER
(CV), owel /e/). Posi i e co ela ions we e iden i ied wi h he change in oice quali y (HNR (Q2),
all owels) and i s a iabili y (HNR (SD), owels /e/, /o/, /u/). The simila esul s can be obse ed
when assessing he quali y by GNE ( owel /e/).
Appl. Sci. 2018,8, 2339 16 o 18
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