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Public Health Research Resulting from One of the World's Largest Outbreaks Caused by Entero-Hemorrhagic Escherichia coli in Germany 2011: A Review.

Köckerling, Elena,Karrasch, Laura,Schweitzer, Aparna,Razum, Oliver,Krause, Gerard

Abstract

In 2011, Germany experienced one of the largest outbreaks of entero-hemorrhagic Escherichia coli (EHEC) ever reported. Four years thereafter, we systematically searched for scientific publications in PubMed and MEDPILOT relating to this outbreak in order to assess the pattern of respective research activities and to assess the main findings and recommendations in the field of public health. Following PRISMA guidelines, we selected 133 publications, half of which were published within 17 months after outbreak onset. Clinical medicine was covered by 71, microbiology by 60, epidemiology by 46, outbreak reporting by 11, and food safety by 9 papers. Those on the last three topics drew conclusions on methods in surveillance, diagnosis, and outbreak investigation, on resources in public health, as well as on inter-agency collaboration, and public communication. Although the outbreak primarily affected Germany, most publications were conducted by multinational cooperations. Our findings document how soon and in which fields research was conducted with respect to this outbreak.

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Decembe 2017 | Volume 5 | A icle 3321 Re iew published: 11 Decembe 2017 doi: 10.3389/ pubh.2017.00332 F on ie s in Public Heal h | www. on ie sin.o g Edi ed by: Alex W. F ied ich, Uni e si y Medical Cen e G oningen, Ne he lands Re iewed by: Zisis Kozlakidis, Uni e si y College London, Uni ed Kingdom Ana A onso, Uni e si y o São Paulo, B azil Robin Koeck, Klinikum Oldenbu g, Ge many *Co espondence: Gé a d K ause [email p o ec ed] Special y sec ion: This a icle was submi ed o In ec ious Diseases – Su eillance, P e en ion and T ea men , a sec ion o he jou nal F on ie s in Public Heal h Recei ed: 13Ma ch2017 Accep ed: 23No embe 2017 Published: 11Decembe 2017 Ci a ion: Köcke lingE, Ka aschL, Schwei ze A, RazumO and K auseG (2017) Public Heal h Resea ch Resul ing om One o he Wo ld’s La ges Ou b eaks Caused by En e o-Hemo hagic Esche ichia coli in Ge many 2011: A Re iew. F on . Public Heal h 5:332. doi: 10.3389/ pubh.2017.00332 Public Heal h Resea ch Resul ing om One o he wo ld’s La ges Ou b eaks Caused by en e o- Hemo hagic Esche ichia coli in Ge many 2011: A Re iew Elena Köcke ling1,2, Lau a Ka asch1, Apa na Schwei ze 3, Oli e Razum1 and Gé a d K ause 3,4* 1 Depa men o Epidemiology and In e na ional Public Heal h, Biele eld Uni e si y, Biele eld, Ge many, 2 Depa men Müns e , Ins i u e o Rehabili a ion Resea ch I R, Müns e , Ge many, 3 Depa men o Epidemiology, Helmhol z Cen e o In ec ion Resea ch, B aunschweig, Ge many, 4 Hanno e Medical School, Hanno e , Ge many In 2011, Ge many expe ienced one o he la ges ou b eaks o en e o-hemo hagic Esche ichia coli (EHEC) e e epo ed. Fou yea s he ea e , we sys ema ically sea ched o scien i ic publica ions in PubMed and MEDPILOT ela ing o his ou b eak in o de o assess he pa e n o espec i e esea ch ac i i ies and o assess he main indings and ecommenda ions in he ield o public heal h. Following PRISMA guidelines, we selec ed 133 publica ions, hal o which we e published wi hin 17mon hs a e ou b eak onse . Clinical medicine was co e ed by 71, mic obiology by 60, epidemiology by 46, ou b eak epo ing by 11, and ood sa e y by 9 pape s. Those on he las h ee opics d ew con- clusions on me hods in su eillance, diagnosis, and ou b eak in es iga ion, on esou ces in public heal h, as well as on in e -agency collabo a ion, and public communica ion. Al hough he ou b eak p ima ily a ec ed Ge many, mos publica ions we e conduc ed by mul ina ional coope a ions. Ou indings documen how soon and in which ields esea ch was conduc ed wi h espec o his ou b eak. Keywo ds: disease ou b eaks, Shiga- oxigenic/en e o-hemo hagic Esche ichia coli, hemoly ic u emic synd ome, Ge many, esea ch iNTRODUCTiON In sp ing 2011, Ge many expe ienced one o he la ges ou b eaks o en e o-hemo hagic Esche ichia coli (EHEC) e e epo ed, almos 3,000 people ell ill wi h acu e gas oen e i is, 855 o hem de el- oped hemoly ic u emic synd ome (HUS). In o al, 55 people died due o he in ec ion (1). The ou b eak a ec ed p ima ily i e s a es in No he n Ge many bu also isi o s om 15 o he coun ies and was linked o a smalle subsequen ou b eak in F ance (2). In con as o wha would ha e been expec ed om p e ious ou b eak epo s and su eillance da a, his ou b eak was cha ac e ized by high case a ali y, a highe p opo ion o HUS esul ing om he EHEC in ec ion (1.1 cases pe 100,000 inhabi an s in 2011 e sus an a e age o 0.1 cases pe 100,000 inhabi an s yea ly, in 2001– 2010), a p edominance o adul pa ien s (3.10 HUS esul ing om EHEC in ec ion and 15.5 EHEC cases wi hou HUS pe 100,000 inhabi an s in 2011 e sus less han 0.0 HUS esul ing om EHEC 2 Köcke ling e al. Resea ch on a La ge EHEC Ou b eak F on ie s in Public Heal h | www. on ie sin.o g Decembe 2017 | Volume 5 | A icle 332 in ec ion and EHEC cases wi hou HUS pe 100,000 inhabi an s yea ly, in 2001–2010) and a s onge p edominance o emale pa ien s (HUS esul ing om EHEC in ec ion: 68% emale pa ien s, EHEC wi hou HUS: 58% emale pa ien s) (1). The ou - b eak las ed 58days, om May 8 o July 5, 2011. On May 25, 2011, se en days a e he i s no i ica ion o he ou b eak, he causa i e pa hogen was iden i ied o be Shiga oxin (Ve ocy o oxin)- p oducing Esche ichia coli O104:H4, a bac e ium wi h a no el i ulence p o ile in compa ison o s ains usually p e alen in Eu ope. F om May 20 o July 8, 2011, he Robe Koch Ins i u e (RKI), he Ge man ede al public heal h ins i u e, oge he wi h local and s a e heal h and ood sa e y agencies, conduc ed a o al o 13 epidemiological ield in es iga ions, using di e en s udy designs. Ini ial in es iga ions poin ed a le uce, aw oma oes, and cucumbe s as po en ial sou ces o he in ec ion. On June 10—3 weeks a e he i s no i ica ion o he ou b eak—epidemi- ological e idence suppo ed ha enug eek sp ou s, p oduced in Ge many om seeds impo ed om Egyp , we e he ehicle caus- ing he ou b eak (3). The ou b eak esul ed in massi e challenges o hospi als, public heal h and ood sa e y agencies, and in ense in e na ional media co e age. The e we e signi ican economic epe cussions on he ag icul u e indus y o a ious Eu opean coun ies, pa icula ly Spain, a e he Hambu g sec e a y o heal h p ema u ely p esen ed an uncon i med labo a o y esul e oneously implica ing cucumbe impo ed om Spain as he po en ial sou ce o in ec ion (3). This, in u n, had in e na ional poli ical and economic consequences, including a empo a y emba go o ood p oduc s expo ed om he Eu opean Union. Al hough epidemiological s udies and in es iga ions suppo ed ha enug eek sp ou s we e he ehicle, a ious a emp s o de ec he pa hogen in sp ou s consumed by known pa ien s had ailed. In ea ly e alua ions o he ou b eak, K ause e al. (3), S a k e al. (4), and Beu in and Ma in (5) highligh ed he uniqueness and size o he ou b eak. They s ongly ecommended e alua ing he expe iences wi h he ou b eak as bes as possible in o de o be e p e en and con ol compa able si ua ions in he u u e. In his wo k, we sys ema ically e iewed he scien i ic li e a u e ela ed o his ou b eak 4yea s a e i s onse . The aim o he s udy was o ace he scien i ic p ocess in o de o assess o which ex en he di e en disciplines we e in ol ed, o iden i y he collabo a- ions es ablished, and o ind ou which public heal h- ela ed opics we e esea ched. The esul s o his wo k can help public heal h au ho i ies o be e unde s and how he scien i ic com- muni y wo ks unde he condi ions o a disease ou b eak. Wi h his knowledge, coo dina ion and collabo a ion be ween public heal h au ho i ies and scien is s can be acili a ed. This pape also encou ages scien is s om di e en disciplines o ake a b oade iew du ing ou b eak in es iga ions, and o con empla e he chal- lenges and po en ials o in e disciplina y collabo a ion. MATeRiALS AND MeTHODS Following he P e e ed Repo ing I ems o Sys ema ic e iews and Me a-Analyses (PRISMA) guidelines (6), we sea ched o li e a u e in PubMed and MEDPILOT using he sea ch e ms “EHEC” OR “O104:H4” OR “HUS” and hei ela ed Medical Subjec heading (MESH) “Shiga oxigenic Esche ichia coli” OR “hemoly ic-u emic synd ome” in combina ion wi h “Ge many” and i s MESH e m “Ge many” appea ing in i le, abs ac o key wo ds o a icles published be ween May 1, 2011 and Ap il 30, 2015. We did no apply any es ic ion ega ding he language o he publica ions. Since MEDPILOT does no allow e ospec i ely speci ying exac sea ch pe iods, we ini ially included publica ions om Janua y 2011 o Ap il 2015 and la e manually excluded hose published be ween Janua y 1 and Ap il 30, 2011. We also included any addi ional publica ions ha we e e e enced in e ie ed a icles and me ou inclusion c i e ia bu we e no lis ed in he wo da abases (Figu e1). We conduc ed a wo-s age sc eening o he e ie ed li e a u e. Fi s , i les and abs ac s we e sc eened. Second, eligibili y o inclusion in he e iew was assessed by ull- ex sc eening o a icles e ained a e he i s sc eening. Two e iewe s (EK and LK) independen ly sc eened he li e a u e in duplica e. In he case o disc epan o unce ain esul s whe e he wo e iewe s could no each consensus, a hi d e iewe (GK) was consul ed. Besides he o mal c i e ion o ime o publica ion, s udies had o mee he ollowing c i e ia o inclusion: hey had o be scien i ic a icles published in a publicly accessible jou nal, bu excluding wo k ha was ei he non-o iginal o no pee e iewed, such as go e nmen epo s, edi o ials, commen a ies, eplies, mee ing abs ac s, and dia ies (e.g., a icles e lec ing he cou se o he ou b eak in daily in e als om a pe sonal poin o iew). We also excluded all publica ions epo ing on o he ou b eaks o s ains, as well as publica ions on he ou b eak in ques ion bu no cons i u ing o iginal esea ch, such as ea men ecommenda- ions no based on esea ch ela ing o his ou b eak. We included a icles on cases o O104:H4 in ec ion ou side Ge many ela ed o his ou b eak. We hen assigned he a icles o one o mo e o he ollowing p e-de ined opics: Epidemiology, Food Sa e y, and Ou b eak Repo ing as Public Heal h opics and Medicine (including disease p og ession, non-mic obiological diagnosis and ea men ), and Mic obiology (including mic obiological diagnosis) as u he opics. Con en s o publica ions belonging o he opics medicine o mic obiology hough we e no analyzed, as his would be beyond he public heal h scope o his e iew. We also eco ded he coun ies o o igin o he au ho s’ ins i u- ions in he ca ego ies, “Ge many,” “non-Ge man coun ies,” and in e na ional collabo a ions in he ca ego y “Ge many and non-Ge man coun ies.” We assigned each a icle o one o mo e o he sub opics lis ed in Table1. Addi ionally, we assigned e e y a icle o one o he ollowing h ee ypes o publica ion: e iew, si ua ion epo , and o iginal esea ch. We di e en ia ed be ween e iews conduc ed o , o mo i a ed by, he ou b eak bu no p o- cessing da a on his ou b eak (oppo uni y e iews); and e iews sys ema ically p ocessing publica ions on his ou b eak (e alua- ion e iews). Si ua ion epo s comp ised ou b eak epo s ha we e p ima ily desc ip i e in na u e, while o iginal esea ch only included a icles ha epo ed analy ical s udy designs. Fo he summa ized analysis, si ua ion epo s and o iginal esea ch we e comp ised in he ca ego y “o he publica ions.” The pa e ns o espec i e esea ch ac i i ies, namely he publica ion la ency di - e en ia ed by opic and he opics di e en ia ed by coun ies o o igin o he au ho s and by publica ion ype, we e assessed o all included publica ions. Fo all publica ions ha belonged o he Public Heal h opics Epidemiology, Food Sa e y, and Ou b eak FiGURe 1 | Flow p ocess cha o li e a u e sea ch and selec ion. *Alloca ion o sub opics only o o he ypes o a icles and no o e iews. Mo e han one opic/ sub opic pe pape (sums highe han o als). 3 Köcke ling e al. Resea ch on a La ge EHEC Ou b eak F on ie s in Public Heal h | www. on ie sin.o g Decembe 2017 | Volume 5 | A icle 332 Repo ing, we ex ac ed he main indings and ecommenda ions using a da a ex ac ion o m de eloped o his e iew. ReSULTS By applying he sea ch c i e ia, we ound 346 publica ions in PubMed and 304 in MEDPILOT; 214 a icles (32.9%) we e duplica es, esul ing in a o al o 436 unique publica ions w i en in Chinese, Du ch, English, F ench, Ge man, Polish, Russian, Spanish, o Swedish. O hese, 255 publica ions we e excluded based on con en c i e ia, 47 o being edi o ials, commen a ies, eplies, dia ies, o mee ing abs ac s, and i e because o being submi ed o published be o e May 1, 2011, lea ing 129 (29.6%) a e ull- ex sc eening. We iden i ied an addi ional 11 publica- ions on sc u inizing e e ence lis s o eligible e iews, o which ou a icles ul illed ou eligibili y c i e ia. In o al, 133 eligible publica ions (published in Chinese, Du ch, English, Ge man, and Swedish language) we e included in he sys ema ic e iew (Figu e1; Table2). Fi y-one a icles we e published wi hin he i s yea a e onse o he ou b eak, 46 in he second yea , 19 in he hi d, and 17 in he ou h yea , wi h a peak o 19 publica ions in he las qua e o 2012 (Figu e2). In he i s yea a e onse o he ou b eak, 20 (24%) publica ions belonged o he ca ego y Epidemiology, anging be ween 17 (26%) and 4 (14%) in he ol- lowing yea s. Mos publica ions in he i s yea a e he ou b eak belonged o he opic Mic obiology (30 publica ions, 37%). The numbe o publica ions o his opic d opped o 16 (25%) in he second yea and o 8 (29%) in he hi d yea . In he i s as well as in he second yea a e he ou b eak, 24 publica ions appea ed wi hin he opic Medicine esul ing in 29 and 37%, espec i ely, ollowed by 14 publica ions (50%) in he hi d yea and 9 publica- ions (41%) in he ou h yea . As displayed in Figu e2, he opics TABLe 1 | De ini ions o opics and hei sub opics. Topics Con en o he opics Sub opics Con en o he sub opics Medicine – P ocedu es in medicine – Clinical ou comes, insigh s gained h ough au opsy – Long- e m ou comes, includes in o ma ion on shedding and seconda y ansmission – S a iona y and ambulan ou b eak managemen NA NA Mic obiology – Genome analysis – P ocedu es o genome analysis used o de eloped o diagnos ics wi h ega d o p ospec i e epidemics – Labo a o y in es iga ion o he i ulence ac o s and an ibio ic esis ance – De elopmen o accine NA NA Epidemiology – Cause s udy – Cases iden i ied ia he su eillance and o he sys ems – Used o newly de eloped me hods o p edic numbe s o new cases – Ou b eak- ela ed cases ou side Ge many – Managemen o he ou b eak on ede al and egional le el and in coope a ion wi h in ol ed ins i u ions Su eillance – Ge man su eillance and epo ing sys ems – Asymp oma ic cases and seconda y cases – Cha ac e is ics o he ou b eak Ou b eak in es iga ion – In es iga ion o he ou b eak sou ce – Me hods o ood ace back and o wa d used o in en ed a e wa d Ou b eak managemen – Ou b eak managemen , in o ma ion ans e Food Sa e y – Me hods used o newly de eloped o iden i y en e o-hemo hagic Esche ichia coli (EHEC) con amina ion o ood – En i onmen al in ol emen (was e wa e , d inking wa e , ba hing wa e , g ound, e c.) due o di ec o indi ec (e.g., ia ood p oduc ion chain) con ac o humans Iden i ica ion o EHEC in ood – De ec ion o EHEC in ood En i onmen al in ol emen – Wa e as he basis o ood p oduc ion – Animals as a ese oi Ou b eak Repo ing – In o ma ion passed on o (p o essional) public – Me hods o isk communica ion used du ing he ou b eak – Popula ion’s pe spec i e on in o ma ion co e age – Communica ion be ween expe s and gene al popula ion P o essional pe spec i e – In o ma ion eleased and hei con en - ela ed a angemen Lay pe spec i e – Scien i ic in es iga ion on how and wha in o ma ion has been eleased 4 Köcke ling e al. Resea ch on a La ge EHEC Ou b eak F on ie s in Public Heal h | www. on ie sin.o g Decembe 2017 | Volume 5 | A icle 332 Table 5. Wi hin he opic o Epidemiology, conclusions and ecommenda ions mainly add essed he ollowing issues: (1) au oma iza ion o disease no i ica ion and changes in no i- ica ion laws; (2) me hodological imp o emen s in su eillance; (3) pe sonnel esou ces in public heal h; (4) ac o s ela ed o seconda y cases; (5) no el ou b eak in es iga ion me hods; and (6) capaci y and collabo a ion be ween di e en agencies and ins i u ions. Wi hin he opic o Food Sa e y, conclusions and ecommenda ions add essed he issues o (1) sani a ion o was ewa e ; (2) sa e y o d inking wa e ; (3) me hods o de ec he pa hogens in ood/ om ood samples; and (4) hygienic handling o li es ock. Rega ding Ou b eak Repo ing, conclu- sions and ecommenda ions mainly add essed he ques ion o (1) iming o public in o ma ion; (2) de ail as well as cohe ence o communica ion; and (3) coo dina ion o isk communica ion be ween di e en agencies and indi iduals. DiSCUSSiON We ound a o al numbe o 133 o iginal publica ions di ec ly ela ed o one geog aphically and empo ally a he con ined ou b eak. Al hough majo publica ions appea ed wi hin days and weeks o he onse o he ou b eak (11), he median la ency o publica ions was 17mon hs wi h 17 pape s (13% o he o al) appea ing as la e as in he ou h yea . This indica es ha much o he esea ch conduc ed wi h espec o his ou b eak wen beyond immedia e ou b eak in es iga ions. I add essed esea ch ques ions ha a e o ele ance o ood sa e y, su eillance, and Food Sa e y and Ou b eak Repo ing we e he leas equen ly co e ed opics h oughou he 4-yea ime pe iod anging om 6 o 0% o Food Sa e y and 4 o 8% o Ou b eak Repo ing. Hal o he 133 a icles we e published wi hin 17mon hs a e he onse o he ou b eak ( e iews: median 16mon hs; o he publica ion ypes: median 17mon hs). As Figu e2 e eals, we did no ind any u he li e a u e ela ed o he analyzed opics Ou b eak Repo ing, Food Sa e y, o Epidemiology a e he hi d qua e o 2014. Publica ion la ency o all o he ypes o publica ions was lowes o he opic o Food Sa e y (median o 9mon hs) and highes o he opic o Ou b eak Repo ing (median 20mon hs). Fo e iews, publica ion la ency was 11mon hs in he opic o Mic obiology and 18mon hs in he opic o Medicine (Table3). The ex en o collabo a ion was de e mined wi hin he di e en publica ion ypes and opics: In e na ional collabo a ion could be ound in 3/20 e iews and in 28/113 o he publica ion ypes. Mos e iew a icles we e by ins i u ions om non-Ge man coun ies only (14/20), while o he publica ion ypes we e mos ly by Ge man ins i u ions only (57/113). In o al, in e na- ional collabo a ions we e seen in 31/133 a icles. Mos a icles in he opic Medicine (42/71=59%) we e exclusi ely au ho ed by Ge man ins i u ions, whe eas a icles on Mic obiology we e mos ly au ho ed by non-Ge man au ho s (32/60=53%). In he opic o Epidemiology he p edominan au ho ship se up was Ge man and in e na ional collabo a ion (19/46=41%) (Table4). A o al o 39 publica ions belonged o one o mo e o he opics Epidemiology, Food Sa e y, o Ou b eak Repo ing (Table 4). Thei main indings and ecommenda ions a e displayed in TABLe 2 | Publica ions included in he sys ema ic e iew (n=133). Re e ence Assigned opics Medicine Mic obiology epidemiology Food sa e y Ou b eak epo ing (7) X (8) X (9) X (10) X (11) X X X (12) X (13) X X (14) X (15) X (16) X (5) X X X X (17) X (18) X (19) X X X (20) X X X (21) X X X (22) X (23) X (24) X X (25) X X (26) X (27) X (28) X (29) X (30) X (31) X (32) X (33) X X (34) X X (35) X X (36) X (37) X X X (38) X X (39) X (40) X X (41) X X (42) X X X (43) X (44) X (45) X (46) X X (47) X (48) X (49) X X (50) X (51) X X (52) X X X (53) X (54) X (55) X (56) X (57) X X (58) X X (59) X X (60) X (61) X (62) X X (63) X (64) X X (65) X (66) X Re e ence Assigned opics Medicine Mic obiology epidemiology Food sa e y Ou b eak epo ing (3) X X (67) X X (68) X (69) X (70) X (71) X (72) X (73) X X (74) X X (75) X (76) X (77) X X (78) X (79) X (80) X (81) X (82) X (83) X X X (84) X (85) X (86) X (87) X (88) X (89) X (90) X X (91) X (92) X (93) X (94) X X X (95) X (96) X X (97) X X X (98) X (99) X (100) X (101) X (102) X X (103) X (104) X (105) X X X (106) X X (107) X (2) X X X (108) X (109) X X (110) X X (111) X (112) X (113) X (114) X X (115) X (116) X X (117) X (118) X X X (4) X X X X (119) X X (120) X (121) X (122) X (123) X (124) X TABLe 2 | Con inued (Con inued) (Con inued) 5 Köcke ling e al. Resea ch on a La ge EHEC Ou b eak F on ie s in Public Heal h | www. on ie sin.o g Decembe 2017 | Volume 5 | A icle 332 TABLe 3 | Median o publica ion la ency in mon hs wi hin he di e en opics. Publica ion ype Topic Medicine Mic obiology epidemiology Food sa e y Ou b eak epo ing To al Re iew 18 11 11 16 NA 16 O he publica ion ypes 18 11 18 9 20 17 FiGURe 2 | Numbe o publica ions by yea /qua e and opic (n=133 publica ions, one pape can be assigned o mo e han one opic). Re e ence Assigned opics Medicine Mic obiology epidemiology Food sa e y Ou b eak epo ing (125) X (126) X (127) X (128) X (129) X (130) X X (131) X (132) X (133) X (134) X (135) X TABLe 2 | Con inued TABLe 4 | Coun ies o ins i u ions in ol ed by opics. Coun ies o ins i u ions Topics Medicine Mic obiology epidemiology Food sa e y Ou b eak epo ing Only Ge many To al 42 16 10 4 5 % 59 27 22 45 46 Only non-Ge man coun ies To al 13 32 17 3 4 % 18 53 37 33 36 Ge many and non-Ge man coun ies To al 16 12 19 2 2 % 23 20 41 22 18 All To al 71 60 46 9 11 % 100 100 100 100 100 One pape may co e mo e han one opic. 6 Köcke ling e al. Resea ch on a La ge EHEC Ou b eak F on ie s in Public Heal h | www. on ie sin.o g Decembe 2017 | Volume 5 | A icle 332 ou b eak in es iga ion me hods in gene al, bu also ela e o clinical and mic obiological aspec s o EHEC. This is u he suppo ed by he b oad spec um o opics and sub opics co e ed by hese publica ions. We iden i ied some cha ac e is ic di e ences among opics no only wi h espec o publica ion la ency bu also wi h espec o he composi ion o ins i u ions con ibu ing o he publica ions (Table 3). As expec ed, he majo i y o he a icles we e published exclusi ely by, o led by, Ge man ins i u ions. Howe e , gi en ha he ou b eak p ima ily occu ed in Ge many, he p opo ion o non-Ge man collabo a o s o lead au ho s appea s o be high. Non-Ge man pa icipa ion o lead au ho ship was mos common in Mic obiological esea ch on he causa i e E. coli s ain and in e iews based on p io publica ions. This is easily explained by he ac ha hese kinds o publica ions did no TABLe 5 | S uc u al o e iew o main indings and ecommenda ions o he ex ac ed publica ions wi hin he opics epidemiology, ood sa e y, and ou b eak epo ing (n=39). Topic, sub opic, issue S udy design Con en Main indings Conclusions and ecommenda ions Epidemiology, Su eillance, S anda d P ocess – Timelines (9) – E alua ion (3, 69) – C oss-sec ional s udy (11, 40, 125) – Delayed epo ing o i s cases (3, 9, 69, 125) – Fi e no he n s a es o Ge many we e mos ly a ec ed (3, 11, 40) – Women a e mo e a ec ed han men (3, 11, 40) – Adul s a e mo e a ec ed han child en (3, 11, 40) – Change in he law: de elopmen and implemen a ion o an au oma ed no i ica ion sys em (3, 9, 105) – Sen inel su eillance (3, 105) – De elopmen o an ideal Shiga oxin-p oducing Esche ichia coli (STEC) su eillance (4) – Tes ing all s ool samples o en e opa hic E. coli (38) – 25–30 epidemiologis s o suppo au ho i ies (3) Epidemiology, Su eillance, Imp o emen Measu es – Timelines (9, 38) – E alua ion (3, 4, 49, 105) – C oss-sec ional s udy (125) – Cen al coo dina ion h ough he Robe Koch Ins i u e (RKI) (3, 125) – Implemen a ion o daily epo ing (3, 9, 125) – Implemen a ion o a synd omic su eillance sys em (3, 125) – Success depends on he compliance o he in ol ed pe sons (49) – E. coli in ec ions a e unde es ima ed h ough ou ine su eillance (38) Epidemiology, Su eillance, Seconda y and a ypical cases – Case-con ol S udy (13, 116) – C oss-sec ional s udy (41, 51) – Coho S udy (116) – Labo a o y in es iga ion (47) – E alua ion (4) – Median o shedding was 10–14days (116) – No seconda y in ec ion du ing pos dia hea (116) – O104:H4 seconda y ansmission, simila o o he S x 2 ypes (51) – 33 pos -ou b eak cases, all caused by seconda y ansmission (41) – Pos -ou b eak cases we e also es ed in F ance (47) – P opo ion o asymp oma ic cases is signi ican ly highe among people who consumed sp ou s in compa ison o people who did no (13) – Ex en o shedding is ele an wi h ega d o seconda y cases (4) – Resea ch on he ac o s in luencing he de elopmen o clinical symp oms (13) – Tes ing o he ou b eak s ain o s ool samples om con i med cases’ household membe s ee o cha ge enhanced apid de ec ion o seconda y cases (51) Epidemiology, Su eillance, Cases ou side and in Ge many – C oss-sec ional s udy (2, 42) – Case epo (59, 67, 83) – Coho s udy (64, 109) – E alua ion (3) – Impo ed and seconda y cases in 15 coun ies (2, 59, 67, 83, 109) – Mean age 46yea s, 71% emale (64) – 3,793 cases epo ed in Ge many, 827 hemoly ic u emic synd ome (HUS) cases, 53 a ali ies (3) – 3,816 cases epo ed in Ge many, 845 HUS cases, 36 a ali ies (42) – 88% o he cases a e adul s (42) – Gas oen e i is cases: median age 46yea s, 58% emale (3) – HUS cases: median age 43yea s, 69% emale (3) – Mos o he cases ou side he i e mos ly a ec ed s a es we e a el- ela ed (42) – Web-based case egis e : used by 73 hospi als in Ge many, 17 in Sweden, and 1 in he Ne he lands;631 HUS cases we e egis e ed (64) Epidemiology, Ou b eak In es iga ion, Gene al in o ma ion – C oss-sec ional s udy (2, 11, 40) – Coho s udy (24, 33) – Case-con ol s udy (24, 110, 116) – Case epo (59, 83) – T ace back and o wa d (24) – E alua ion (3) – In o ma ion on he ou b eak s ain (11, 40) – Fi s s udies ailed o iden i y he sou ce (3, 33, 59, 83, 110, 116) – Hin s on sp ou s a e ou h case-con ol s udy (2, 3, 24) – 13 epidemiological s udies conduc ed by RKI and local au ho i ies (3) – Local au ho i ies decla e sp ou s om a a m in Lowe Saxony as he sou ce, sp ou s we e wi hd awn om he ma ke (3) – Using da a ecipes and o de lis s o es au an cus ome s o educe dependence om ecall (24) – Sea ch o connec ions be ween di e en e en s and cases (3, 11) – Many case-con ol s udies ailed du ing he ou b eak (33, 110) – Educa ion o ca e ing pe sonal o in ec ious diseases (33) (Con inued) 7 Köcke ling e al. Resea ch on a La ge EHEC Ou b eak F on ie s in Public Heal h | www. on ie sin.o g Decembe 2017 | Volume 5 | A icle 332 8 Köcke ling e al. Resea ch on a La ge EHEC Ou b eak F on ie s in Public Heal h | www. on ie sin.o g Decembe 2017 | Volume 5 | A icle 332 Topic, sub opic, issue S udy design Con en Main indings Conclusions and ecommenda ions Epidemiology, Ou b eak In es iga ion, Food ace back and o wa d – T ace back and ace o wa d (24, 82, 126) – Coho s udy (24) – Case-con ol s udy (24) – E alua ion (3, 4) – 41 clus e s aced back o sp ou s om a m in Lowe Saxony (24) – De elopmen o he unde lying da abase ook 3weeks (126) – In o ma ion on dis ibu ion ways is equi ed (82) – De eloping isk p o iles o iden i y checkpoin s in ood p oduc ion chain (4) – T ace back/ ace o wa d should be enhanced as s anda d me hod (3, 4) Epidemiology, Ou b eak Managemen , Gene al in o ma ion – E alua ion (3, 69, 105) – C oss-sec ional s udy (2) – Cen al coo dina ion h ough RKI, collabo a ion wi h local au ho i ies, WHO, and EU (3, 69) – Special ask o ce implemen ed, consis ed o ep esen a i es o ede al agencies and he EFSA (3) – In e disciplina y collabo a ion o heal h and ood sa e y au ho i ies needed (105) – C isis managemen o be de eloped and p ac iced in ad ance (69) – P o essional associa ions, Uni e si ies and Labo a o ies o be inco po a ed in o de eloping c isis managemen (69) – In o ma ion sys em has o be imp o ed (69) – Educa ion o epidemiologis s has o be ensu ed (69) – Expe iences om Ge many o use o de eloping coun ies (2) – Pe sonnel o in e disciplina y managemen is needed (3) – S eady communica ion be ween clinicians and PH- Se ice (3) Epidemiology, Ou b eak Managemen , In o ma ion ans e – E alua ion (3, 73) – Daily epo o he RKI online a ailable (3) – Fi e join p ess con e ence o he RKI and he Fede al Ins i u e o Risk Assessmen (BFR) (3, 73) – O e 300 p ess inqui ies answe ed, 50 TV in e iews gi en by BFR (73) – Publica ions should be adjus ed be ween ede al and local au ho i ies (3) Epidemiology, Ou b eak Managemen , Secu i y o supply – E alua ion (3, 34, 37, 69) – C oss-sec ional s udy (55, 125) – Lack o in o ma ion on clinical ca é capaci y du ing ou b eak (3) – Ambula o y ea men in Hambu g and Lübeck was ensu ed (37) – Clinical ca e no ensu ed in 2/79 hospi als in 15/16 Ge man s a es (125) – Redi ec ing o in o ma ion o su ge ies was no su icien (37, 69) – U.S. Depa men o De ense independen ly bundled in o ma ion (34) – De elopmen o an in o ma ion sys em on clinical ca e capaci y (3) – Da a consis ency is mo e impo an han accu acy o case coun y (55) Food Sa e y, Iden i ica ion o EHEC in ood, NA – Labo a o y in es iga ion (60, 102, 120) – E alua ion (4) – Me hod based on U.S: Bac e iological Analy ical Manual sui able o de ec O104:H4 (60) – High-p essu e inac i a ion does no depend on es e ase ac i i y (102) – Me hod based on CHROMaga STEC sui able o de ec O104:H4 (120) – De elopmen o imp o ed me hods o iden i y O104:H4 in ood (4) – Reducing E. coli shedding o li es ock can educe in ec ion isk o humans (4) Food Sa e y, En i onmen al in ol emen , NA – E alua ion (4, 39) – C oss-sec ional s udy (53) – No e idence o O104:H4 in was ewa e (39) – No concei able i O104:H4 will es ablish endemeci y in humans o li es ock (39) – No in ec ion isk ia ba hing wa e (53) – Check on es ablishmen o O104:H4 in li es ock o humans (4) – Wa e used in ood p oduc ion should be o d inking wa e quali y (39) – De elopmen o decon amina ion me hods o was ewa e (4) – De elopmen o es s o en i onmen al samples o E. coli (4) – Regula es ing o d inking wa e (39) (Con inued) TABLe 5 | Con inued 9 Köcke ling e al. Resea ch on a La ge EHEC Ou b eak F on ie s in Public Heal h | www. on ie sin.o g Decembe 2017 | Volume 5 | A icle 332 Topic, sub opic, issue S udy design Con en Main indings Conclusions and ecommenda ions Ou b eak Repo ing, P o essional Pe spec i e, Gene al In o ma ion – C oss-sec ional s udy (11, 40) – The BFR gi es consume ecommenda ion and hygiene ins uc ions (11, 40) – In o ma ion on esea ch esul s a e gi en (11, 40) – Recommenda ions apply un il new e idence is ound (11) Ou b eak Repo ing, P o essional Pe spec i e, Risk communica ion – E alua ion (3, 34, 73, 105) – C oss-sec ional s udy (2) – Inconsis en in o ma ion was gi en du ing he ou b eak (2, 3) – Media was used o in o m he popula ion (73, 105) – Goals o isk communica ion we e eached (73) – In o ma ion should be objec i e, co ec and no inconsis en (34, 105) – To communica e in o ma ion on cause, impac , and measu es (105) – In o ma ion no o be wi hheld un il alidi y is ensu ed (73) – A oiding inconsis en in o ma ion (3, 73) Ou b eak Repo ing, Lay Pe spec i e, Pe cei ed In o ma ion – E alua ion (73) – C oss-sec ional s udy (123) – In o ma ion gi en by he BFR pe cei ed o be su icien , – suspension o p e ious ecommenda ion pe cei ed o be unde s andable (73) – Risk communica ion should be easily accessible (123) Ou b eak Repo ing, Lay Pe spec i e, Sou ces o in o ma ion – C oss-sec ional s udy (2, 114, 123) – E alua ion (37, 73) – Coho s udy (122) – TV is pe cei ed o be us able (73) – D ama izing con ibu ions in TV an ea (2, 114) – Web 2.0 o in o ma ion sea ch pe cei ed o be unsa is ying due o inconsis en in o ma ion (122) – Capabili y o educe pe sonal isk by ollowing ecommenda ion is pe cei ed o be high (123) – P ecise in o ma ion o he popula ion is needed (37) – Economic loss could ha e been a oided h ough be e in o ma ion o he public (123) TABLe 5 | Con inued equi e ac i e in ol emen in he epidemiological in es iga ion o clinical pa ien managemen (19, 118). This may also explain he somewha unexpec ed obse a ion ha e iews ended o be published ea lie han o he ypes o publica ions (Table3): while clinicians and public heal h agen s we e p ima ily occupied wi h managing he ou b eak and la e gene a ing and analyzing he da a de i ed om i , non-in ol ed (and hus mo e likely non-Ge man) specialis s in he ield could wi hou any delay ocus on analyzing he exis ing li e a u e. Such di ision o asks appea s a ional and use ul, since ea ly e iew on speci ic managemen ques ions could help hose p ima ily in ol ed in he managemen o adap hei in e en ions. Simila ly, labo a o ies ou side he p ima ily a ec ed coun y can complemen he mic obiologic esea ch ela ed o he ou b eak once an isola ed s ain is made a ailable, hus sup- po ing local labo a o ies o apidly cha ac e ize he implica ed pa hogen. The EHEC ou b eak was excep ional in many aspec s and p o ided a unique oppo uni y o be e unde s anding he disease (5). Some o he indings published on he ou b eak may appea edundan (Table 5). This does no necessa ily signi y duplica e publica ion, since a i ing a simila conclusions using di e en s udy popula ions o di e se analy ic me hods applied o he same s udy popula ion is a desi ed p ocess in science. I is also jus i ied in an acu e ou b eak si ua ion o quickly publish esul s o ea ly analyses and la e complemen hem wi h mo e comple e o me hodologically e ined s udies (73). We ound many case epo s, pa icula ly in he ield o Medicine. Due o hei speci ic me hodological limi a ions, indi idual case epo s ha e a limi ed po en ial o con ibu e signi ican ly o p essing esea ch ques ions, unless a pooled analysis o cases is pe o med. Un o una ely, no such analysis seems o ha e been done so a . Ou sea ch s a egy including wo independen da a bases and all languages is likely o ha e led o a a he comp ehensi e collec ion o publica ions. We belie e ou decision o exclude edi o ials, commen a ies, eplies and dia ies, is unlikely o esul in ele an o iginal esea ch indings o be missed. Fu he mo e, his app oach ensu ed ha only scien i ically e iewed publica ions we e included and i inhibi ed dissemina ion o poli ically mo i a ed communica ions by s akeholde s o in e es ed pa ies. Ne e heless, la ge and mo e comp ehensi e s udies on he ou b eak may s ill be published in he u u e, especially in he ield o Medicine. The in en ion o add ess he pa e ns o espec i e esea ch ac i i ies om di e se disciplines esul ing om his ou b eak, ins ead o add essing one speci ic esea ch ques ion, p ecluded us om conduc ing a me a- analysis. We limi ed da a ex ac ion o Public Heal h- ela ed opics as we wan ed o ocus on he scien i ic ou pu gene a ed in his ield. The obse ed la ency o publica ions on he Ge man EHEC ou b eak 2011 highligh s he ac ha e en se e al yea s a e such an e en , o iginal esea ch wo k con inues o be published. We also ound a conside able le el o coope a ion be ween la ge numbe o ins i u ions om wi hin and ou side Ge many. Ou e iew was no designed o judge he con en and scien i ic me i o hese publica ions. We do no expec ha he limi a ion o 4yea s a e onse o he ou b eak in luenced he esul s o his e iew as we obse ed ha he numbe o publica ions dec eased owa d he end o he inclusion pe iod. Mo eo e , no el indings and conclusions we e less common in he la e yea s o he obse a ion pe iod. This wo k e eals a unique map o how he EHEC ou b eak was