Synthesis and Biological Evaluation of Novel 2-Substituted Analogues of (-)-Pentenomycin i
Abstract
European Research Council
Full text
475
© 2020. Thieme. All igh s ese ed. Synle 2020, 31, 475–481
Geo g Thieme Ve lag KG, Rüdige s aße 14, 70469 S u ga , Ge many
S. A. Zisopoulou e al. Le e
Syn le
Syn hesis and Biological E alua ion o No el 2-Subs i u ed
Analogues o (–)-Pen enomycin I
S a oula A. Zisopouloua
Spy idon Bousisb,c,d
Jö g Haupen halb
Jenni e He manne
Rol Mülle d,e
Anna K. H. Hi sch*b,c,d
Dimi i Komio is
John K. Gallosa
Ch is os I. S a hakis*a
0000-0003-4755-6244
aDepa men o Chemis y, A is o le Uni e si y o Thessaloniki, Uni e si y
Campus, 541 24, Thessaloniki, G eece
[email p o ec ed]
bDepa men o D ug Design and Op imiza ion, Helmhol z Ins i u e o
Pha maceu ical Resea ch (HIPS) – Helmhol z Cen e o In ec ion Resea ch
(HZI), 66123, Saa b ücken, Ge many
[email p o ec ed]
cS a ingh Ins i u e o Chemis y, Uni e si y o G oningen, Nijenbo gh 7,
9747 AG G oningen, The Ne he lands
dDepa men o Pha macy, Saa land Uni e si y, Campus Building E8.1,
66123 Saa b ucken, Ge many
eDepa men o Mic obial Na u al P oduc s, Helmhol z Ins i u e o
Pha maceu ical Resea ch (HIPS) – Helmhol z Cen e o In ec ion Resea ch
(HZI), Campus Building E8.1, Saa b ücken, Ge many
Depa men o Biochemis y and Bio echnology, Uni e si y o Thessaly,
Biopolis, 41500, La issa, G eece
Published as pa o he Special Sec ion 11 h EuCheMS O ganic Di ision Young In es iga o Wo kshop
O
O
O
T O
Pd-ca alyzed coupling
eac ion
HO
HO
O
HO
R
HO
HO
O
HO
X
R = n-C8H17
S. au eus s . Newman MIC = 27 µg/mL
S. pneumoniae DSM20566 MIC = 9 µg/mL
S. pneumoniae DSM11865 MIC = 9 µg/mL
and
dep o ec ion
17 new pen enomycin de i a i es
combined yield ange o coupling and
dep o ec ion s eps: 39–94%
X = bo h EWGs and EDGs R = a yl, alkyl
I
Recei ed: 31.10.2019
Accep ed a e e ision: 27.11.2019
Published online: 02.01.2020
DOI: 10.1055/s-0039-1690772; A ID: s -2019-b0592-l
Abs ac A lib a y o no el 2-subs i u ed de i a i es o he an ibio ic
na u al p oduc pen enomycin I is p esen ed. The new collec ion o an-
alogues is di ided in wo main classes, 2-alkynyl- and 2-a yl- de i a i es,
which a e accessed by he app op ia e ype o palladium-ca alyzed
c oss-coupling eac ion o he 2-iodo-p o ec ed pen enomycin I wi h
sui able nucleophiles. The new de i a i es we e es ed o hei ac i i y
agains ce ain ypes o bac e ia and one o hem, compound 8h, was
ound o exhibi signi ican inhibi o y ac i i y agains se e al G am-pos-
i i e bac e ia bu also displayed cy o oxic ac i i y agains euka yo ic cell
lines.
Key wo ds (–)-pen enomycin, Sonogashi a, Suzuki, an imic obial
agen s, G am-posi i e bac e ia
(–)-Pen enomycin I (1a) was i s isola ed om he cul-
u e b o h o S ep omyces eu y he mus MCRL 0738, by
Umino and co-wo ke s in 1973 (Figu e 1).1 The said com-
pound is a p incipal membe o a b oade amily o cyclo-
pen enoid an ibio ics, which possess mode a e ac i i y
agains G am-posi i e and G am-nega i e bac e ia.1a,2 O e
he pas ew yea s, we3 and o he s4 ha e demons a ed he
po en ial o 2-halogena ed pen enomycin as sui able p e-
cu so o de i a iza ion, hus leading o new cyclopen-
enones wi h po en ially imp o ed biological p o ile.
He ein, we epo a sys ema ic e o o syn hesize a se-
ies o analogues o he na u al an ibio ic, co e ing a b oad
ange o s e eochemical demand and in oducing a a ie y
o unc ional g oups. In he con ex o ou esea ch on he
de elopmen o new me hodologies o access chi al cyclo-
pen enones om suga -de i ed syn hons, we ha e de-
sc ibed he syn hesis o (–)-pen enomycin I h ough an oxi-
Figu e 1 Rep esen a i es o he pen enomycin amily
Pen enomycins I–III
O
OH
OR2
OR1
O
OH
OR2
OR1
O
OH
O
OH
O
OH
OH
OH
4
5
1a: R1 = H, R2 = H
1b: R1 = H, R2 = OAc
1c: R1 = OAc, R2 = H
G-2201-C
Dehyd open enomycin I
4
4-Epipen enomycins I–III
2a: R1 = H, R2 = H
2b: R1 = H, R2 = OAc
2c: R1 = OAc, R2 = H
5-Epipen enomycin
Echinospo in
3
SYNLETT
0936-52141437-2096
© Geo g Thieme Ve lag S u ga · New Yo k
2020, 31, 475–481
le e
de
Dieses Dokumen wu de zum pe sönlichen Geb auch he un e geladen. Ve iel äl igung nu mi Zus immung des Ve lages.
476
© 2020. Thieme. All igh s ese ed. Synle 2020, 31, 475–481
S. A. Zisopoulou e al. Le e
Syn le
da i e elimina ion p ocess on sui able ammonium sal s
(Scheme 1, sequence 5 → 6 → 1a).5 Unexpec edly, we ob-
se ed ha when iodide was used as he coun e ion in he
ammonium sal 5, he espec i e 2-iodo-p o ec ed pen-
enomycin 7 was a o ded. This ‘undesi able’ side p oduc
pe ec ly se ed he pu poses o ou syn he ic plan o p e-
pa e a lib a y o de i a i es o he na u al an ibio ic in o -
de o imp o e i s mode a e biological ac i i y. In doing so,
palladium-ca alyzed c oss-coupling eac ions we e hough
o be he mos sui able means, a ac suppo ed by he wo k
o Negishi and Johnson on ela ed c oss-coupling eac ions
o 2-iodo-cycloalkenones.4
Scheme 1 P ecu so and gene al scheme o de i a iza ion
The i s class o de i a i es we en isaged was he 2-
alkynyl-subs i u ed pen enomycins accessible ia he well-
es ablished Sonogashi a eac ion.6 Indeed, unde ypical e-
ac ion condi ions,7 he coupling o 2-iodopen enomycin 7
wi h a ious e minal alkynes 9a–i (see gene al eac ion
scheme in Table 1), in he p esence o CuI and ca aly ic
amoun s o [Pd(PPh3)2Cl2], deli e ed he desi ed p oduc s in
good o excellen yield. A e emo al o bo h p o ec ing
g oups, in one ope a ion, unde s ongly acidic condi ions
he inal 2-alkynyl-pen enomycins 8a–i we e ob ained.
Table 1 Coupling Reac ions o 2-Iodopen enomycin 7 wi h Alkynes 9a–ia and Subsequen Dep o ec ion o Pen enomycin De i a i es 8a–ib
D . Ch is os S a hakis was bo n in Spa a, G eece and s udied chem-
is y a A is o le Uni e si y o Thessaloniki. A he same uni e si y he e-
cei ed his doc o al diploma in o ganic chemis y in 2007, unde he
guidance o P o . Gallos. In 2008 he joined he esea ch g oup o P o .
Snyde a Columbia Uni e si y in he ci y o New Yo k, whe e he ex-
plo ed he exci ing chemis y o polyphenol na u al p oduc s. A he
end o 2009 he e u ned o A hens, G eece o join an ongoing esea ch
p og am on new aminoglycoside an ibio ics supe ised by D . Vou -
loumis a he Na ional Cen e o Na u al Sciences. D . S a hakis com-
ple ed his pos doc o al s udies in he esea ch eam o P o . Paul
Knochel a Ludwig Maximillian Uni e si y in Munich (2011–2012),
whe e he gained aluable expe ience in o ganome allic chemis y.
Fo he nex i e yea s (2013–2018) D S a hakis wo ked as senio e-
sea ch scien is a Pha ma hen Pha maceu icals, whe e he was in ol ed
in he de elopmen o no el scalable ou es o he syn hesis o se e al
ac i e pha maceu ical ing edien s (APIs). Since July 2018, he is an assis-
an p o esso a he Chemis y Depa men o A is o le Uni e si y o
Thessaloniki. The main esea ch e o s o his g oup ocus on he o al
syn hesis o cons uc i ely challenging molecules and he de elopmen
o no el me hodologies ha p omo e s uc u al complexi y.
L-a abinose
OO
HO NMe3
T O
I
[O]
OO
O
T O
I
s eps
i) coun e ion
exchange
ii) oxida ion
OO
O
T O
7
5
6
1a
Pd-ca alyze
d
coupling
eac ion
HO OH
O
HO
pen enomycin
analogues 8
R
En y Alkyne 9Yield o 10 (%) Yield o 8 (%)
1
9a
10a 90 8a 82
2
9b
10b 89 8b 87
OO
O
T O
I
OO
O
T O
7 10a–i
HO OH
O
HO
R
8a–i
R
90% aq. TFA
9a–i, [Pd(PPh3)2Cl2]
72–90%
54–96%
CuI, iP 2NH
THF, 25 °C
O
O
O
T O
Ph O
HO
HO
HO
Ph
O
O
O
T O
Tol O
HO
H
O
HO
Tol
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477
Thieme. All igh s ese ed. Synle 2020, 31, 475–481
S. A. Zisopoulou e al. Le e
Table 1 (con inued)
Syn le
In he ligh o he abula ed esul s, i is easily deduced
ha ou iodo-cyclopen enone p ecu so 7 ope a ed as a
pe ec coupling pa ne , leading o he an icipa ed p od-
uc s 10 in excellen yields (72–90%) unde he desc ibed e-
ac ion condi ions. A a ie y o subs i u ed a yl alkynes (Ta-
ble 1, en ies 1–6) was inco po a ed as he alkyne compo-
3
9c
10c 76 8c 81
4
9d
10d 79 8d 89
5
9e
10e 75 8e 93
6
9
10 75 8 95
7
9g
10g 72 8g 54
8
9h
10h 85 8h 96
9
9i
10i 82 8i 90
a To 7 (0.18 mmol) in THF (3.5 mL) we e added successi ely he co esponding alkyne (0.36 mmol), CuI (10 mg, 0.05 mmol), iP 2NH (0.13 mL, 0.91 mmol), and
[Pd(PPh3)2Cl2] (8 mg, 0.01 mmol). The eac ion p oceeded a 25 °C o 1–2 h.
b 90% aqueous TFA a 0–25 °C.
En y Alkyne 9Yield o 10 (%) Yield o 8 (%)
O
O
O
T O
O
HO
HO
HO
B O
O
O
T O
B
O
HO
HO
HO
B
Cl O
O
O
T O
Cl
O
HO
HO
HO
Cl
Cl
O
O
O
T O
Cl
O
HO
HO
HO
Cl
OH O
O
O
T O
OH
3
O
HO
HO
HO
OH
3
6
O
O
O
T O
6
O
HO
HO
HO
6
3
O
O
O
T O
3
O
HO
HO
HO
3
Dieses Dokumen wu de zum pe sönlichen Geb auch he un e geladen. Ve iel äl igung nu mi Zus immung des Ve lages.
478
Thieme. All igh s ese ed. Synle 2020, 31, 475–481
S. A. Zisopoulou e al. Le e
Table 2 (con inued)
Syn le
nen bea ing a ange o unc ional g oups o a ious
s e eochemical and elec onical p o iles. In e e y case, he
desi ed coupling p oduc was e icien ly deli e ed and iso-
la ed by column ch oma og aphy. In he same ein, alkyl-
subs i u ed e minal alkynes we e coupled e ec i ely wi h
p o ec ed iodo-pen enomycin 7 in yields anging om 72–
85%, unde he same eac ion condi ions (Table 1, en ies 7–9).
Na u al p oduc analogues 8a–i we e ob ained a e
acidic ea men in 90% aqueous TFA, ensu ing emo al o
bo h he iphenylme hyl e he and he ace al p o ec ing
g oups. Due o he enhanced lipophilic cha ac e o he p o-
duced de i a i es, a simple pu i ica ion by column ch oma-
og aphy was enough o p o ide a ma e ial o app op ia e
pu i y (>95%) o biological es ing.
Nex , we p oceeded wi h he 2-a yl-sus i u ed pen eno-
mycin de i a i es 13a–h ha we in ended o access ia a
Suzuki eac ion be ween 7 and he co esponding a ylbo-
onic acids 11a–h (see gene al eac ion scheme in Table 2),8
ollowed by global dep o ec ion.
Table 2 Coupling Reac ions o 2-Iodopen enomycin 7 wi h A ylbo on-
ic Acids 11a–ha and Subsequen Dep o ec ion o Pen enomycin De i a-
i es 13a–hb
En y Bo onic acid 11 Yield o 12 (%) Yield o 13 (%)
1
11a 12a 92 13a 99
2
11b
12b 82 13b 90
3
11c 12c 85 13c 90
4
11d 12d 99 13d 67
OO
O
T O
I
OO
O
T O
7 12a–h
HO OH
O
HO
R
13a–h
R
90% aq. TFA
11a–h, [Pd(Ph3P)2Cl2]
Ag2O, Ph3As
THF/H2O, 25 °C
82–99%
59–99%
B
HO
OH
O
O
O
T O
O
HO
HO
HO
B
nBu
HO
OH
O
O
O
T O
nBu
O
HO
HO
HO
nBu
B
NO2
HO
OH
O
O
O
T O
O2N
O
HO
HO
HO
O2N
BOHHO
O
O
O
T O
O
HO
HO
HO
A e sc eening se e al ca aly ic sys ems, we ound ha
he combina ion o [Pd(PPh3)2Cl2] and Ph3As as he ligand
was he op imum one o a clean con e sion in o he cou-
pling p oduc .9 In he p esence o he said ca alys and
Ag2O, as he base, in a sol en sys em THF/H2O (3:1), he
coupling o 2-iodo-enone 7 wi h a ious a yl bo onic acids
11a–h was success ully accomplished. The eac ion wi h
mode a ely o elec on- ich nucleophiles (Table 2, en ies 1,
2, and 4–8) was ealized in excellen yields (82–99%). E en
a he deac i a ed bo onic acids eac ed smoo hly unde
he desc ibed eac ion condi ions (Table 2, en y 3). In con-
as , elec on-de icien bo onic acids such as 2,6-di luo o-
phenyl bo onic acid (11i) and 3-py idylbo onic acid (11j)
ga e no eac ion wi h any o he sc eened ca aly ic sys ems.
Global dep o ec ion o he coupling p oduc s 12a–h a o d-
ed, a e ypical pu i ica ion, he unp o ec ed 2-a yl-pen-
enomycins 13a–h in 59–99% yield.
5
11e 12e 94 13e 99
6
11 12 86 13 98
7
11g
12g 89 13g 99
8
11h
12h 98 13h 59
9
11i 11j
NRc
a To 7 (0.18 mmol) in THF (2.25 mL) and H2O (0.75 mL) we e added succes-
si ely he co esponding bo onic acid (0.27 mmol), Ag2O (67 mg, 0.29
mmol), Ph3As (12 mg, 0.04 mmol), and [Pd(PPh3)2Cl2] (7 mg, 0.018 mmol).
The eac ion p oceeded a 25 °C o 1–2 h.
b 90% aqueous TFA 0 o 25 °C.
c NR: no eac ion.
En y Bo onic acid 11 Yield o 12 (%) Yield o 13 (%)
B
HO
OH
O
O
O
T O
O
HO
HO
HO
B
HO
OH
O
O
O
T O
O
HO
HO
HO
B
HO
OH
Ph O
O
O
T O
Ph
O
HO
HO
HO
Ph
B
HO
OH
OO
O
O
T O
O
O
HO
HO
HO
O
B
HO
OH F
F
BNHO
OH
Dieses Dokumen wu de zum pe sönlichen Geb auch he un e geladen. Ve iel äl igung nu mi Zus immung des Ve lages.
479
© 2020. Thieme. All igh s ese ed. Synle 2020, 31, 475–481
S. A. Zisopoulou e al. Le e
Syn le
The an imic obial ac i i y o he new compounds was
es ed agains h ee ep esen a i e s ains, one G am-posi-
i e and wo G am-nega i es, namely S aphylococcus au-
eus s ain Newman, Esche ichia coli K12, and Pseudomonas
ae uginosa PA14 (Table 3). Due o solubili y limi s, he com-
pounds we e es ed a he maximum soluble concen a ion.
The designed de i a i es 8a–i and 13a–h we e ound no o
exhibi any an imic obial e ec agains E. coli and P. ae ugi-
nosa, indica ing ha G am-nega i e s ains a e no sensi-
i e o he ac ion o he a o emen ioned compounds. In
con as , de i a i es 8a, 8d, 8 , and 8h exhibi ed mode a e
o good inhibi ion o he g ow h o S. au eus, which was su-
pe io o he one exe ed by he na u al p oduc 1a (Table
3). The obse ed di e ence in ac i i y among he wo class-
es o bac e ia may be a ibu ed o he di e ence in hei
ype o cell wall and he abili y o he compounds o pene-
a e hem, as well as he educ ion o he in acellula con-
cen a ion o he compounds by e lux pumps.
Table 3 Minimum Inhibi o y Concen a ion (MIC) Values o Compounds
8a–i and 13a–h agains S. au eus, E. coli, and P. ae uginosa (in Μ)
Based on a ecen li e a u e epo ,10 he an imic obial
ac i i y o 2-phenyl-pen enomycin (analogue 13a, Table 2)
agains se e al s ains, including S. au eus, En e ococcus ae-
cium, and P. ae uginosa, was a enua ed compa ed o he
o iginal na u al p oduc . By analogy, we obse ed ha
when an a oma ic g oup was in oduced a he -posi ion
(compounds 13a–h), he an imic obial ac i i y was com-
ple ely abolished (Table 3). Howe e , he ac i i y was e-
s o ed when an in e media e linke o a long chain was in-
co po a ed, such as in 8a, 8d, 8 , and 8h. Mo e speci ically,
compound 8h, which bea s a long alipha ic chain o en ca -
bon a oms, p o ed o be he mos po en an imic obial
agen . The ce ain leng h and he lexibili y o his chain is
suspec ed o be he eason o i s ac i i y, while 8i, a de i a-
i e wi h a sho e chain by h ee ca bon a oms, is inac i e.
Finally, de i a i es 8d and 8 , which ha e an a oma ic ing
connec ed o he iple bond and bea a halogen a me a o
pa a posi ion, a e ac i e bu less po en .
In o de o es he ac i i y o he designed analogues
agains addi ional G am-posi i e s ains, he mos po en
inhibi o 8h was sc eened agains he pa hogens indica ed
in Table 4. The compound does no show any an imic obial
ac i i y agains En e ococcus aecium and En e ococci aeca-
lis, as well as agains Mycobac e ium smegma is a concen-
a ions below 35 g/mL. No ewo hy, 8h exhibi s a mini-
mum inhibi o y concen a ion (MIC) o 9 g/mL agains
S ep ococcus pneumoniae, making i one o he mos ac i e
de i a i es o pen enomycin I epo ed in he li e a u e so
a . In e es ingly, i shows he same MIC alue agains a
penicillin- esis an s ain o S. pneumoniae (PRSP), hus ex-
cluding possible c oss- esis ance.
Table 4 MIC o 8h agains Se e al Pa hogenic G am-Posi i e Bac e ia.
Finally, we es ed he iabili y o h ee human cell lines
(A549, HEK293, and HepG2) a e ea men wi h com-
pound 8h. The compound shows cy o oxic e ec s agains
he selec ed cell lines a 25 Μ (Table 5), indica ing ha u -
he s uc u al op imiza ion is equi ed o ackle his d aw-
back. On he o he hand, a deepe explo a ion o he po en-
ial o compound 8h o ac as an an icance agen is wo hy
o being unde aken.
In summa y, we success ully syn hesized a small lib a y
o 2-alkynyl, and 2-a yl-de i a ized pen enomycins based
on ypical palladium-ca alyzed coupling eac ions.11 The
no el analogues o he na u al an ibio ic we e es ed o
hei an imic obial ac i i y agains bo h, G am-posi i e and
G am-nega i e bac e ia. 2-A yl-modi ied pen enomycins
show no special ac i i y agains bo h ypes o bac e ia,
while om he 2-alkynyla ed de i a i es, he one bea ing a
Compound S. au eus s . Newman E. coli K12 P. ae uginosa PA14
8a 500 >500 >500
8b >500 >500 >500
8c >250 >250 >250
8d 231 >250 >250
8e >250 >250 >250
8 222 >250 >250
8g >250 >250 >250
8h 98 >250 >250
8i >250 >250 >250
13a >500 >500 >500
13b >500 >500 >500
13c >500 >500 >500
13d >500 >500 >500
13e >500 >500 >500
13 >500 >500 >500
13g >250 >250 >250
13h >500 >500 >500
1a >500 – –
Indica o s ains MIC (g/mL)
S. pneumoniae DSM-20566 9
S. pneumoniae DSM-11865a 9
E. aecalis DSM-12956 >35
E. aecium DSM-17050b>35
E. aecalis DSM-20478 >35
E. aecalis DSM-2570 >35
E. aecium DSM-20477 >35
M. smegma is mc2155 >35
a PRSP: penicillin- esis an S. pneumoniae.
b VRE: ancomycin- esis an En e ococcus aecium.
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480
© 2020. Thieme. All igh s ese ed. Synle 2020, 31, 475–481
S. A. Zisopoulou e al. Le e
Syn le
long alipha ic chain o en ca bon a oms, 8h, p o ed o be a
s ong inhibi o o G am-posi i e S. au eus and S. pneumo-
niae s ains. The leng h o he alipha ic chain was demon-
s a ed o be c ucial as he co esponding analogue wi h a
sho e chain by h ee ca bon a oms, 8i, showed no ac i i y.
In addi ion, compound 8h shows cy o oxic e ec agains
ce ain cell lines, some o hem being cance cells, indica -
ing po en ial an icance ac ion.
Funding In o ma ion
A.K.H.H. g a e ully acknowledges he Eu opean Resea ch Council
(ERC, G an No. 757913), he Helmhol z-Associa ion’s Ini ia i e and
Ne wo king Fund, and he Eu opean Union's Ho izon 2020 esea ch
and inno a ion p og amme (COFUND-ALERT, G an No. 665250).
Eu opean Resea ch Council (757913)Ho izon 2020 (665250)
Acknowledgmen
Vic o ia Schmi , Dennis Thomas Jene , and Jeanine Jung a e hanked
o he echnical suppo .
Suppo ing In o ma ion
Suppo ing in o ma ion o his a icle is a ailable online a
h ps://doi.o g/10.1055/s-0039-1690772.
Suppo ing In o ma ionSuppo ing In o ma ion
Re e ences and No es
(1) (a) Umino, K.; Fu umai, T.; Ma suzawa, N.; Awa aguchi, Y.; I o,
Y.; Okuda, T. J. An ibio . 1973, 26, 506. (b) Umino, K.; Takeda, N.;
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2113.
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loniki: G eece, 2007.
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(7) Typical P ocedu e o he Sonogashi a Coupling
2-Iodopen enomycin (7, 100 mg, 0.181 mmol, 1.0 equi ) was
dissol ed in THF (3.5 mL) and Pd(PPh3)2Cl2 (8 mg, 0.011 mmol,
0.06 equi ) and CuI (10 mg, 0.05 mmol, 0.3 equi ) we e added
successi ely. The mix u e was deoxygena ed and lashed wi h
a gon ca e ully and hen was cooled o 0 °C. 1-Decyne (65.3 L,
0.362 mmol, 2.0 equi ) was added d opwise, ollowed by addi-
ion o iP 2NH (0.13 mL, 0.905 mmol, 5 equi ). The eac ion
mix u e was s i ed a oom empe a u e o 2 h be o e i was
dilu ed wi h E OAc and acidi ied wi h 1 N HCl. The o ganic laye
was sepa a ed, and he aqueous laye was ex ac ed wi h E AOc
(2 × 10 mL). The combined o ganic laye s we e d ied o e
Na2SO4. The sol en was emo ed in acuo, and he esidue was
pu i ied by lash column ch oma og aphy (hexanes/E OAc,
15:1) o a o d he enone 10h (87mg) in 85% yield.
Nex , compound 10h was dissol ed in a mix u e 90% TFA/H2O
(2.0 mL) a 0 °C, and he esul ing solu ion was s i ed o 90
min a his empe a u e. Upon comple ion o dep o ec ion, as
de e mined by TLC, ola iles we e emo ed unde educed p es-
su e. The esidue was dissol ed in me hanol and e apo a ed ill
d y. The abo e p ocedu e was epea ed wice. The esidue was
pu i ied by lash column ch oma og aphy using E OAc/MeOH
(9:1) as he eluen o a o d 8h as a yellow s icky oil (42 mg, 96%
yield). 1H NMR (500 MHz, CD3OD): = 7.53 (d, J = 3.0 Hz, 1 H),
4.74 (d, J = 3.0 Hz, 1 H), 3.69 (d, J = 10.8 Hz, 1 H), 3.55 (d, J = 10.8
Hz, 1 H), 2.40 ( , J = 7.1 Hz, 2 H), 1.60–1.52 (m, 2 H), 1.43 (dq, J =
13.0, 6.7 Hz, 2 H), 1.34–1.29 (m, 8 H), 0.90 ( , J = 6.7 Hz, 3 H). 13C
NMR (125 MHz, CD3OD): = 204.0, 161.3, 129.7, 98.7, 75.4,
70.4, 70.0, 63.0, 31.6, 28.9, 28.8, 28.5, 28.1, 22.3, 18.7, 13.0. FTIR
(nea ): 3462, 2913, 2234, 1738, 1492, 1245, 704 cm–1. []D25
+13.6° (c 1.57 E OH). HRMS (ESI): m/z [M – H]– calcd o
C16H23O4: 279.1596; ound: 279.1589.
(8) Typical P ocedu e o he Suzuki Reac ion
2-Iodopen enomycin (7, 100 mg, 0.181 mmol, 1.0 equi ) was
dissol ed in a mix u e o THF (2.5 mL) and H2O (0.75 mL). Naph-
halene-1-bo onic acid (47 mg, 0.272 mmol, 1.5 equi ), Ag2O
(67 mg, 0.29 mmol, 1.6 equi ), Ph3As (12 mg, 0.04 mmol, 0.2
equi ), and Pd(PPh3)2Cl2 (7 mg, 0.018 mmol, 0.1 equi ) we e
added successi ely, and he eac ion was s i ed a ambien
empe a u e o 3 h. Upon comple ion he mix u e was il e ed
h ough Celi e. The il a e was concen a ed unde educed
p essu e and pu i ied by lash column ch oma og aphy (hex-
anes/E OAc, 15:1) o a o d he espec i e enone 12d (100 mg,
99% yield).
Nex , compound 12d was dissol ed in a mix u e o 90% TFA/H2O
a 0 °C, and he esul ing solu ion was s i ed o 90 min a his
empe a u e. When he eac ion was comple ed as de e mined
by TLC, ola iles we e emo ed unde educed p essu e, and he
esidue was dissol ed in me hanol and e apo a ed down. The
abo e p ocedu e was epea ed wice, and he esidue was pu i-
ied by lash column ch oma og aphy using E OAc/MeOH (9:1)
as he eluen . De i a i e 13d was a o ded as b own solid (32
mg, 67% yield, mp 52–55 °C). 1H NMR (500 MHz, CD3OD): =
7.89 (d, J = 8.0 Hz, 2 H), 7.82 (d, J = 8.3 Hz, 1 H), 7.69 (d, J = 2.8
Hz, 1 H), 7.49 ( , J = 7.6 Hz, 2 H), 7.46–7.43 (m, 1 H), 7.38 (d, J =
7.1 Hz, 1 H), 4.97 (d, J = 2.8 Hz, 1 H), 3.89 (d, J = 10.5 Hz, 1 H),
3.73 (d, J = 10.5 Hz, 1 H). 13C NMR (125 MHz, CD3OD): = 205.7,
160.2, 144.7, 133.6, 131.2, 129.3, 128.6, 127.9, 126.5, 125.8,
125.6, 125.1, 124.7, 76.2, 70.3, 63.4. FTIR (nea ): 3388, 2924,
2852, 1715, 1509, 1141, 778 cm–1. []D25 –20.5° (c 1.46 E OH).
HRMS (ESI): m/z [M – H]– calcd o C16H13O4: 269.0814; ound:
269.0819.
Table 5 Viabili y agains Compound 8h and Re e ence Compounds o
Th ee Human Cell Lines Exp essed as (% Viabili y).
Viabili y o cells (%)
Compound A549 HEK293 HepG2
8h (25 M) 20 ± 3 6 ± 1 28 ± 13
doxo ubicin (1 M) 55 ± 2 58 ± 1 79 ± 1
i ampicin (100 M) 97 ± 1 59 ± 1 83 ± 3
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481
© 2020. Thieme. All igh s ese ed. Synle 2020, 31, 475–481
S. A. Zisopoulou e al. Le e
Syn le
(9) (a) Ruel, F. S.; B aun, M. P.; Johnson, W. S. O g. Syn h., Coll. Vol. X
2004, 467. (b) Miyau a, N.; Suzuki, A. Chem. Re . 1995, 95, 2457.
(10) Kamishima, T.; Suzuki, M.; Aoyagi, S.; Wa anabe, T.; Koseki, Y.;
Kasai, H. Te ahed on Le . 2019, 60, 1375.
(11) An ibac e ial Tes ing
Compounds we e p epa ed as DMSO s ock solu ions, and
minimum inhibi o y concen a ions (MIC) we e de e mined as
desc ibed in he li e a u e.12 Bac e ia we e handled acco ding o
s anda d p ocedu es and we e ob ained om he Ge man Col-
lec ion o Mic oo ganisms and Cell Cul u es (DSMZ) o we e
pa o ou in e nal s ain collec ion. In b ie , bac e ial cul u es
we e dilu ed in T yp ic Soy B o h (TSB; 1.7% pep one casein,
0.3% pep one soymeal, 0.25% glucose, 0.5% NaCl, 0.25% K2HPO4;
pH 7.3; o En e ococci and S ep ococci), Lu ia B o h (LB; 0.05%
sodium chlo ide, 1.0% yp one, and 0.5% yeas ex ac o S.
au eus, E. coli, and P. ae uginosa), BBL Middleb ook 7H9 wi h
glyce ol (0.1% w/ casi one, 5.6 g/mL palmi ic acid, 5 mg/mL
bo ine se um albumin, 4 g/mL ca alase; o M. smegma is), o
Mülle -Hin on b o h (0.2% bee in usion solids, 1.75% casein
hyd olysa e, 0.15% s a ch; pH 7.4; o all o he lis ed bac e ia) o
achie e a inal inoculum o app oxima ely 104 o 105 colony-
o ming uni s (c u)/mL. Compounds we e es ed in se ial dilu-
ion (0.06–128 M) in 96-well pla es, and MIC alues we e
de e mined by isual inspec ion a e 16–48 h incuba ion a
37 °C.
MTT Assay
HepG2 (human hepa ocellula ca cinoma), HEK293 (human
emb yonal kidney), and A549 (human lung ca cinoma) cells (2 ×
105 cells pe well) we e seeded in 24-well in la -bo omed
pla es. Cul u ing o cells, incuba ions and OD measu emen s
we e pe o med as desc ibed p e iously wi h small modi ica-
ion.13 A e seeding o 24 h, he incuba ion was s a ed by he
addi ion o compounds in a inal DMSO concen a ion o 1%.
The li ing cell mass was quan i ied a e 48 h. Ri ampicin was
used as nega i e con ol, doxo ubicin as posi i e con ol.
Full expe imen al de ails o he syn hesis o all pen enomycin
de i a i es, as well as pic u es o 1H NMR and 13C NMR spec a
he eo a e p o ided in he Suppo ing In o ma ion sec ion.
(12) Hü el, S.; Tes olin, G.; He mann, J.; Planke, T.; Gille, F.;
Mo eno, M.; S adle , M.; B öns up, M.; Ki schning, A.; Mülle ,
R. Angew. Chem. In . Ed. 2017, 56, 12760.
(13) Haupen hal, J.; Baeh , C.; Zeuzem, S.; Piipe , A. In . J. Cance
2007, 121, 206.
Dieses Dokumen wu de zum pe sönlichen Geb auch he un e geladen. Ve iel äl igung nu mi Zus immung des Ve lages.