GCase Enhancers: A Potential Therapeutic Option for Gaucher Disease and Other Neurological Disorders
Abstract
Pharmaceutical chaperones (PCs) are small compounds able to bind and stabilize misfolded proteins, allowing them to recover their native folding and thus their biological activity. In particular, lysosomal storage disorders (LSDs), a class of metabolic disorders due to genetic mutations that result in misfolded lysosomal enzymes, can strongly benefit from the use of PCs able to facilitate their translocation to the lysosomes. This results in a recovery of their catalytic activity. No PC for the GCase enzyme (lysosomal acid-β-glucosidase, or glucocerebrosidase) has reached the market yet, despite the importance of this enzyme not only for Gaucher disease, the most common LSD, but also for neurological disorders, such as Parkinson’s disease. This review aims to describe the efforts made by the scientific community in the last 7 years (since 2015) in order to identify new PCs for the GCase enzyme, which have been mainly identified among glycomimetic-based compounds.
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Citation: Martínez-Bailén, M.; Clemente, F.; Matassini, C.; Cardona, F. GCase Enhancers: A Potential Therapeutic Option for Gaucher Disease and Other Neurological Disorders. Pharmaceuticals 2022,15, 823. https://doi.org/10.3390/ ph15070823 Academic Editors: Federica Sodano and Maria Grazia Rimoli Received: 10 June 2022 Accepted: 29 June 2022 Published: 2 July 2022 Publisher’s Note: MDPI stays neutral with regard to jurisdictional claims in published maps and institutional affiliations. Copyright: © 2022 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https:// creativecommons.org/licenses/by/ 4.0/). pharmaceuticals Review GCase Enhancers: A Potential Therapeutic Option for Gaucher Disease and Other Neurological Disorders Macarena Martínez-Bailén1,2,* , Francesca Clemente 1, Camilla Matassini 1and Francesca Cardona 1,* 1Dipartimento di Chimica “Ugo Schiff” (DICUS), Universitàdegli Studi di Firenze, Via della Lastruccia 3-13, 50019 Sesto Fiorentino, Italy; [email protected] (F.C.); [email protected] (C.M.) 2Glycosystems Laboratory, Instituto de Investigaciones Químicas (IIQ), CSIC—Universidad de Sevilla, Av. Américo Vespucio 49, 41092 Sevilla, Spain *Correspondence: [email protected] (M.M.-B.); francesca.car[email protected] (F.C.) Abstract: Pharmaceutical chaperones (PCs) are small compounds able to bind and stabilize misfolded proteins, allowing them to recover their native folding and thus their biological activity. In particular, lysosomal storage disorders (LSDs), a class of metabolic disorders due to genetic mutations that result in misfolded lysosomal enzymes, can strongly benefit from the use of PCs able to facilitate their translocation to the lysosomes. This results in a recovery of their catalytic activity. No PC for the GCase enzyme (lysosomal acidβ -glucosidase, or glucocerebrosidase) has reached the market yet, despite the importance of this enzyme not only for Gaucher disease, the most common LSD, but also for neurological disorders, such as Parkinson’s disease. This review aims to describe the efforts made by the scientific community in the last 7 years (since 2015) in order to identify new PCs for the GCase enzyme, which have been mainly identified among glycomimetic-based compounds. Keywords: Gaucher disease; lysosomal storage disorders; pharmacological chaperones; allosteric chaperones; iminosugars; Parkinson disease 1. Introduction Lysosomal storage disorders (LSDs) are a group of more than 70 genetic metabolic diseases characterized by lysosomal dysfunction due to gene mutations that encode for lysosomal enzymes. The gene mutations affect the function of the encoded protein, which is not correctly folded and thus undergoes endoplasmic reticulum-associated protein degradation (ERAD). As a consequence, the protein-misfolding phenomenon causes a lack of catalytic activity, leading to accumulation of unmetabolized substrates in the lysosomes [1,2]. Pharmacological chaperones (PCs) are small compounds able to bind and stabilize misfolded lysosomal enzymes, facilitating their translocation to the lysosome, which results in the recovery of catalytic activity. The great majority of PCs identified to date bind to the catalytic site acting as inhibitors, but once the enzyme arrives at the lysosome, the PC dissociation permits substrate turnover. These inhibitors act as a template, stabilizing the native folding state in the endoplasmic reticulum (ER) by occupying the active site of the mutant enzyme, with a consequent final counterintuitive effect of enhancing lysosomal enzyme catalytic activity [ 3 , 4 ] (Figure 1). However, more recently, non-competitive inhibitors acting as PCs have also been discovered. Gaucher disease (GD) is the most common LSD of glycosphingolipids and originates from mutations in the GBA gene (chromosome 1q21 − 22), which encodes for the lysosomal enzyme acidβ -glucosidase (glucocerebrosidase or GCase, EC 3.2.1.45, MIM*606463). GCase is the enzyme responsible for the hydrolysis of glucosylceramide (GlcCer) to glucose and ceramide in the lysosomes. Due to its heterogeneity, GD is classified into three types: type 1 , primarily not associated with neurological symptoms, and neuronopathic types 2 and 3 [ 5 ]. Pharmaceuticals 2022,15, 823. https://doi.org/10.3390/ph15070823 https://www.mdpi.com/journal/pharmaceuticals
Pharmaceuticals 2022,15, 823 2 of 26 Pharmaceuticals 2022, 15, x FOR PEER REVIEW 2 of 26 Figure 1. Schematic representation of the action of a pharmacological chaperone (PC) on mutant GCase, which recovers a correct GlcCer degradation. Gaucher disease (GD) is the most common LSD of glycosphingolipids and originates from mutations in the GBA gene (chromosome 1q21−22), which encodes for the lysosomal enzyme acid-β-glucosidase (glucocerebrosidase or GCase, EC 3.2.1.45, MIM*606463). GCase is the enzyme responsible for the hydrolysis of glucosylceramide (GlcCer) to glucose and ceramide in the lysosomes. Due to its heterogeneity, GD is classified into three types: type 1, primarily not associated with neurological symptoms, and neuronopathic types 2 and 3 [5]. More recently, a connection between GCase activity and onset of Parkinson’s disease (PD), the second most common neurological disorder, was highlighted. GCase mutations were shown to be a major risk factor for the onset of PD, since people carrying heterozygous mutations in the GBA gene do not develop GD, but have an increased risk of developing PD [6–8]. More interestingly, the loss of GCase function contributes to the pathogenesis of PD, even independently of the genetic mutation [9], suggesting that modulation of GCase activity may be the key therapeutic target for both pathologies. Over the past 20 years, pharmacological chaperone therapy (PCT) has been investigated as a potential treatment for LSDs, including GD, and has been the subject of numerous reviews [3,10–20]. However, few of these have been limited to GD, i.e., also include other LSDs, and do not cover recent years. Moreover, since the GD–PD connection emerged only recently, the potential use of PCT for treating PD has not been extensively described before. Iminosugars are among the most studied classes of compounds as potential PCs for GD, and include structural classes belonging to polyhydroxylated pyrrolidines, piperidines, pyrrolizidines, indolizidines, and nortropanes [21]. In particular, isofagomine (IFG, 1, Figure 2) is the compound that reached the most advanced clinical trial, but this stopped at phase II in 2018. IFG is a competitive inhibitor of human lysosomal GCase (Ki = 0.016 ± 0.009 µM; IC50 = 0.06 µM) [22], and was found to increase mutant GCase activity 1.6-fold at 10 µM after incubation in fibroblasts bearing homozygous N370S missense mutations (Figure 2) [23]. However, IFG was not effective in reducing the accumulation of lipid substrates when administered to adult patients with type 1 GD, probably due to its high hydrophilicity, which hampers efficient transport to the cells. To overcome this issue, several alkylated piperidine iminosugars have been proposed. 6-Nonyl IFG (4) [24–26], α-1-C-nonyl-DIX (5) [27], and N-nonyl-deoxynojirimycin (NN-DNJ, 6) [28,29] were among the most effective chaperones identified for GD until 2015, being able to strongly enhance the mutated GCase activity in N370S GD fibroblasts, as shown in Figure 2. It is worth noting that the position of the alkyl chain is crucial for the pharmacological chaperoning activity dependent on the peculiar hydroxypiperidine Figure 1. Schematic representation of the action of a pharmacological chaperone (PC) on mutant GCase, which recovers a correct GlcCer degradation. More recently, a connection between GCase activity and onset of Parkinson’s disease (PD), the second most common neurological disorder, was highlighted. GCase mutations were shown to be a major risk factor for the onset of PD, since people carrying heterozygous mutations in the GBA gene do not develop GD, but have an increased risk of developing PD [ 6 – 8 ]. More interestingly, the loss of GCase function contributes to the pathogenesis of PD, even independently of the genetic mutation [ 9 ], suggesting that modulation of GCase activity may be the key therapeutic target for both pathologies. Over the past 20 years, pharmacological chaperone therapy (PCT) has been investigated as a potential treatment for LSDs, including GD, and has been the subject of numerous reviews [ 3 , 10 – 20 ]. However, few of these have been limited to GD, i.e., also include other LSDs, and do not cover recent years. Moreover, since the GD–PD connection emerged only recently, the potential use of PCT for treating PD has not been extensively described before. Iminosugars are among the most studied classes of compounds as potential PCs for GD, and include structural classes belonging to polyhydroxylated pyrrolidines, piperidines, pyrrolizidines, indolizidines, and nortropanes [ 21 ]. In particular, isofagomine (IFG, 1 , Figure 2 ) is the compound that reached the most advanced clinical trial, but this stopped at phase II in 2018. IFG is a competitive inhibitor of human lysosomal GCase ( Ki= 0.016 ±0.009 µM ; IC50 = 0.06 µM ) [ 22 ], and was found to increase mutant GCase activity 1.6-fold at 10 µ M after incubation in fibroblasts bearing homozygous N370S missense mutations (Figure 2) [ 23 ]. However, IFG was not effective in reducing the accumulation of lipid substrates when administered to adult patients with type 1 GD, probably due to its high hydrophilicity, which hampers efficient transport to the cells. To overcome this issue, several alkylated piperidine iminosugars have been proposed. 6-Nonyl IFG ( 4 ) [ 24 , 25 ], α -1-C-nonyl-DIX ( 5 ) [ 26 ], and N-nonyl-deoxynojirimycin (NNDNJ, 6 ) [ 27 , 28 ] were among the most effective chaperones identified for GD until 2015, being able to strongly enhance the mutated GCase activity in N370S GD fibroblasts, as shown in Figure 2. It is worth noting that the position of the alkyl chain is crucial for the pharmacological chaperoning activity dependent on the peculiar hydroxypiperidine skeleton. Indeed, while for deoxynojirimycin (DNJ, 3 ) analogues, N-alkylation renders good PCs for GCase (e.g., compound 6 , Figure 2), in the case of IFG ( 1 ) and 1,5-dideoxy-1,5- iminoxylitol (DIX, 2 ) analogues, the alkylation of the carbon adjacent to nitrogen furnishes better PCs for GD (e.g., compounds 4 and 5 , Figure 2). Despite these encouraging results, no PC for the GCase enzyme has reached the drug market yet.
Pharmaceuticals 2022,15, 823 3 of 26 Pharmaceuticals 2022, 15, x FOR PEER REVIEW 3 of 26 skeleton. Indeed, while for deoxynojirimycin (DNJ, 3) analogues, N-alkylation renders good PCs for GCase (e.g., compound 6, Figure 2), in the case of IFG (1) and 1,5-dideoxy-1,5-iminoxylitol (DIX, 2) analogues, the alkylation of the carbon adjacent to nitrogen furnishes better PCs for GD (e.g., compounds 4 and 5, Figure 2). Despite these encouraging results, no PC for the GCase enzyme has reached the drug market yet. Figure 2. GCase activity increase observed in N370S GD fibroblasts in the presence of IFG (1), DIX (2), and DNJ (3) and their alkylated derivatives (compounds 4–6). This review focuses on the efforts made by the scientific community in the last 7 years (since 2015) in order to identify new PCs for GCase. Both inhibitory compounds, historically the first pharmacological chaperones identified, and allosteric enhancers will be discussed in this account. While the former, covered in the first section, are lysosomal enzyme inhibitors with a counterintuitive effect at sub-inhibitory concentrations corresponding to chaperone behavior, the latter are commonly discovered through a high-throughput screening approach or drug repurposing, and will be the subject of the second section. The final effect of both types of PC is an increase in enzymatic activity. We have chosen to organize the inhibitory chaperone section according to compound structure: iminosugars (six-membered, five-membered, bicyclic, and multivalent iminosugars), sugar analogues, and miscellaneous examples. Although a huge number of strong GCase inhibitors have been reported, the discussion will be limited to those inhibitors that have been tested in vitro on mutated human cells. The second section, which is more innovative in its conception, will cover GCase enhancements and mechanistic studies relative to the very few and cutting-edge examples of allosteric chaperones. The last section of this review is devoted to relevant examples of GCase chaperones assayed in PD animal models. 2. Inhibitory Chaperones 2.1. Iminosugars 2.1.1. Six-Membered Iminosugars NN-DNJ (6, Figure 2) was reported as the first iminosugar with potential for the treatment of GD [28]. Since then, further investigation has been performed in the search for piperidine-derived compounds with potential applications as chaperones for GD. Parmeggiani et al. [30] developed an iminosugar-based library composed of polyhydroxylated piperidines, pyrrolidines, and pyrrolizidines (see Sections 2.1.2 and 2.1.3 for pyrrolidine and pyrrolizidine analogues, respectively). Regarding the piperidine derivatives, they were prepared from a carbohydrate-derived aldehyde and incorporated different moieties, such as a lipophilic chain or a benzyl group, either on the endocyclic or Figure 2. GCase activity increase observed in N370S GD fibroblasts in the presence of IFG ( 1 ), DIX (2) , and DNJ (3) and their alkylated derivatives (compounds 4–6). This review focuses on the efforts made by the scientific community in the last 7 years (since 2015) in order to identify new PCs for GCase. Both inhibitory compounds, historically the first pharmacological chaperones identified, and allosteric enhancers will be discussed in this account. While the former, covered in the first section, are lysosomal enzyme inhibitors with a counterintuitive effect at sub-inhibitory concentrations corresponding to chaperone behavior, the latter are commonly discovered through a high-throughput screening approach or drug repurposing, and will be the subject of the second section. The final effect of both types of PC is an increase in enzymatic activity. We have chosen to organize the inhibitory chaperone section according to compound structure: iminosugars (six-membered, five-membered, bicyclic, and multivalent iminosugars), sugar analogues, and miscellaneous examples. Although a huge number of strong GCase inhibitors have been reported, the discussion will be limited to those inhibitors that have been tested in vitro on mutated human cells. The second section, which is more innovative in its conception, will cover GCase enhancements and mechanistic studies relative to the very few and cutting-edge examples of allosteric chaperones. The last section of this review is devoted to relevant examples of GCase chaperones assayed in PD animal models. 2. Inhibitory Chaperones 2.1. Iminosugars 2.1.1. Six-Membered Iminosugars NN-DNJ ( 6 , Figure 2) was reported as the first iminosugar with potential for the treatment of GD [ 27 ]. Since then, further investigation has been performed in the search for piperidine-derived compounds with potential applications as chaperones for GD. Parmeggiani et al. [ 29 ] developed an iminosugar-based library composed of polyhydroxylated piperidines, pyrrolidines, and pyrrolizidines (see Sections 2.1.2 and 2.1.3 for pyrrolidine and pyrrolizidine analogues, respectively). Regarding the piperidine derivatives, they were prepared from a carbohydrate-derived aldehyde and incorporated different moieties, such as a lipophilic chain or a benzyl group, either on the endocyclic or the exocyclic nitrogen atom. More polar groups (aminomethyl, carboxylic acid, or polar-ending lipophilic chain) were also investigated. When evaluated towards GCase, the best inhibitory activities were obtained for derivatives 7 and 8 bearing an eight-carbon alkyl chain (IC 50 = 30 and 40 µ M, respectively). Both compounds showed a measurable chaperoning activity towards human fibroblasts derived from Gaucher patients bearing the N370S/RecNcil mutations (1.25- and 1.5-fold enzyme-activity enhancement at 100 µM, respectively) (Figure 3).
Pharmaceuticals 2022,15, 823 4 of 26 Pharmaceuticals 2022, 15, x FOR PEER REVIEW 4 of 26 the exocyclic nitrogen atom. More polar groups (aminomethyl, carboxylic acid, or polar-ending lipophilic chain) were also investigated. When evaluated towards GCase, the best inhibitory activities were obtained for derivatives 7 and 8 bearing an eight-carbon alkyl chain (IC50 = 30 and 40 µM, respectively). Both compounds showed a measurable chaperoning activity towards human fibroblasts derived from Gaucher patients bearing the N370S/RecNcil mutations (1.25- and 1.5-fold enzyme-activity enhancement at 100 µM, respectively) (Figure 3). Figure 3. Inhibitory activity and GCase enhancement of alkylated glycomimetics 7 and 8. A previous study pointed out that sp2-iminosugars behave as strong competitive inhibitors of GCase and have potential as PCs for GD [31]. Mena-Barragán et al. [32] reported the synthesis of several DNJ-based sp2-iminosugars incorporating an orthoester fragment to switch the nature of the aglycone moiety from hydrophobic to hydrophilic in the pH 7 to pH 5 window, which had a dramatic effect on enzyme-binding affinity, thus maximizing the chaperone over the inhibitory behavior. The authors chose the orthoester group due to its chemical acid lability and stability in neutral conditions, properties that allow for optimal performance in a useful pH window. Compounds 9–11 (Figure 4) behaved as selective GCase inhibitors and were 1.3- to 200-fold better ligands of this enzyme than ambroxol (IC50 = 41.5 µM, see Section 2.3), a non-glycomimetic PC under clinical trial for Gaucher disease [33], at neutral pH in the endoplasmic reticulum (ER). At an acidic pH (lysosome), the product 12 (Figure 4) obtained from the hydrolysis of 9–11, was 3-fold weaker ligand than ambroxol. Figure 4. GCase inhibitory activity of DNJ-based sp2-iminosugars 9–12. When tested in cell patients with the N188S/G193W mutation associated with the type 3 phenotype of GD, compound 9, bearing a butoxy chain, showed better enhancing activity (6-fold activity increase at 50 µM) than the octyl and dodecyl analogues 10 and 11. Compound 9 additionally proved to be efficient in enhancing GCase activity in V230G/R296X or F213I/F213I type 2 GD fibroblasts. However, in type 1 GD fibroblasts (N370S/N370S), the enhancement was more modest (1.5-fold enhancement). In the case of L444P/L444P fibroblasts, no activity rescue was observed. Apart from DNJ (3, Figure 2), other six-membered glycomimetics, such as DIX (2, Figure 2), were studied by Sevsěk et al. [34] for the preparation of guanidine (13) and urea (14) DIX-derived compounds (Figure 5) bearing different lipophilic chains at the exocyclic nitrogen atom. The prepared compounds were evaluated against a panel of Figure 3. Inhibitory activity and GCase enhancement of alkylated glycomimetics 7and 8. A previous study pointed out that sp 2 -iminosugars behave as strong competitive inhibitors of GCase and have potential as PCs for GD [ 30 ]. Mena-Barragán et al. [ 31 ] reported the synthesis of several DNJ-based sp 2 -iminosugars incorporating an orthoester fragment to switch the nature of the aglycone moiety from hydrophobic to hydrophilic in the pH 7 to pH 5 window, which had a dramatic effect on enzyme-binding affinity, thus maximizing the chaperone over the inhibitory behavior. The authors chose the orthoester group due to its chemical acid lability and stability in neutral conditions, properties that allow for optimal performance in a useful pH window. Compounds 9 – 11 (Figure 4) behaved as selective GCase inhibitors and were 1.3- to 200-fold better ligands of this enzyme than ambroxol (IC 50 = 41.5 µ M, see Section 2.3), a non-glycomimetic PC under clinical trial for Gaucher disease [ 32 ], at neutral pH in the endoplasmic reticulum (ER). At an acidic pH (lysosome), the product 12 (Figure 4) obtained from the hydrolysis of 9 – 11 , was 3-fold weaker ligand than ambroxol. Pharmaceuticals 2022, 15, x FOR PEER REVIEW 4 of 26 the exocyclic nitrogen atom. More polar groups (aminomethyl, carboxylic acid, or polar-ending lipophilic chain) were also investigated. When evaluated towards GCase, the best inhibitory activities were obtained for derivatives 7 and 8 bearing an eight-carbon alkyl chain (IC50 = 30 and 40 µM, respectively). Both compounds showed a measurable chaperoning activity towards human fibroblasts derived from Gaucher patients bearing the N370S/RecNcil mutations (1.25- and 1.5-fold enzyme-activity enhancement at 100 µM, respectively) (Figure 3). Figure 3. Inhibitory activity and GCase enhancement of alkylated glycomimetics 7 and 8. A previous study pointed out that sp2-iminosugars behave as strong competitive inhibitors of GCase and have potential as PCs for GD [31]. Mena-Barragán et al. [32] reported the synthesis of several DNJ-based sp2-iminosugars incorporating an orthoester fragment to switch the nature of the aglycone moiety from hydrophobic to hydrophilic in the pH 7 to pH 5 window, which had a dramatic effect on enzyme-binding affinity, thus maximizing the chaperone over the inhibitory behavior. The authors chose the orthoester group due to its chemical acid lability and stability in neutral conditions, properties that allow for optimal performance in a useful pH window. Compounds 9–11 (Figure 4) behaved as selective GCase inhibitors and were 1.3- to 200-fold better ligands of this enzyme than ambroxol (IC50 = 41.5 µM, see Section 2.3), a non-glycomimetic PC under clinical trial for Gaucher disease [33], at neutral pH in the endoplasmic reticulum (ER). At an acidic pH (lysosome), the product 12 (Figure 4) obtained from the hydrolysis of 9–11, was 3-fold weaker ligand than ambroxol. Figure 4. GCase inhibitory activity of DNJ-based sp2-iminosugars 9–12. When tested in cell patients with the N188S/G193W mutation associated with the type 3 phenotype of GD, compound 9, bearing a butoxy chain, showed better enhancing activity (6-fold activity increase at 50 µM) than the octyl and dodecyl analogues 10 and 11. Compound 9 additionally proved to be efficient in enhancing GCase activity in V230G/R296X or F213I/F213I type 2 GD fibroblasts. However, in type 1 GD fibroblasts (N370S/N370S), the enhancement was more modest (1.5-fold enhancement). In the case of L444P/L444P fibroblasts, no activity rescue was observed. Apart from DNJ (3, Figure 2), other six-membered glycomimetics, such as DIX (2, Figure 2), were studied by Sevsěk et al. [34] for the preparation of guanidine (13) and urea (14) DIX-derived compounds (Figure 5) bearing different lipophilic chains at the exocyclic nitrogen atom. The prepared compounds were evaluated against a panel of Figure 4. GCase inhibitory activity of DNJ-based sp2-iminosugars 9–12. When tested in cell patients with the N188S/G193W mutation associated with the type 3 phenotype of GD, compound 9 , bearing a butoxy chain, showed better enhancing activity (6-fold activity increase at 50 µ M) than the octyl and dodecyl analogues 10 and 11 . Compound 9 additionally proved to be efficient in enhancing GCase activity in V230G/R296X or F213I/F213I type 2 GD fibroblasts. However, in type 1 GD fibroblasts (N370S/N370S), the enhancement was more modest (1.5-fold enhancement). In the case of L444P/L444P fibroblasts, no activity rescue was observed. Apart from DNJ ( 3 , Figure 2), other six-membered glycomimetics, such as DIX ( 2 , Figure 2), were studied by Sevsˇek et al. [ 33 ] for the preparation of guanidine ( 13 ) and urea ( 14 ) DIX-derived compounds (Figure 5) bearing different lipophilic chains at the exocyclic nitrogen atom. The prepared compounds were evaluated against a panel of commercial glycosidases and human recombinant enzymes: GCase and β -galactocerebrosidase (GALC). Regarding the results for GCase, only the guanidine derivatives were potent and selective inhibitors in the low nanomolar range (IC 50 = 17–245 nM), probably due to the positive charge of the guanidinium group, as suggested by the authors. The guanidine derivatives were better inhibitors than the simple N-nonyl DIX (IC 50 = 752 nM), and this result agrees with the docking studies performed by the authors, which highlighted additional cation– π interactions and extra hydrogen bonding in the guanidine function. The length of the lipophilic chain in the molecule also affected the inhibition: compounds with longer chains were better inhibitors. The authors carried out experiments using fibroblasts homozygous for the N370S mutation, and compound 13a (Figure 5) displayed measurable chaperone activity (1.2-fold at 1 µM).
Pharmaceuticals 2022,15, 823 5 of 26 Pharmaceuticals 2022, 15, x FOR PEER REVIEW 5 of 26 commercial glycosidases and human recombinant enzymes: GCase and β-galactocerebrosidase (GALC). Regarding the results for GCase, only the guanidine derivatives were potent and selective inhibitors in the low nanomolar range (IC 50 = 17–245 nM), probably due to the positive charge of the guanidinium group, as suggested by the authors. The guanidine derivatives were better inhibitors than the simple N-nonyl DIX (IC 50 = 752 nM), and this result agrees with the docking studies performed by the authors, which highlighted additional cation–π interactions and extra hydrogen bonding in the guanidine function. The length of the lipophilic chain in the molecule also affected the inhibition: compounds with longer chains were better inhibitors. The authors carried out experiments using fibroblasts homozygous for the N370S mutation, and compound 13a (Figure 5) displayed measurable chaperone activity (1.2-fold at 1 µM). Figure 5. GCase inhibitory activity of DIX–derived guanidine and urea compounds 13 and 14. Génisson and coworkers reported how ring expansion of pyrrolidine derivatives (15 and 17, Figure 6) to the piperidine ring system (16 and 18, Figure 6) led to a selective targeting of GlcCer formation or hydrolysis. The authors identified in C-octyl piperidine 16 and 2-O-heptyl piperidine 18 good GCase inhibitors (IC 50 = 11 nM and 4 nM, respectively) and PCs with low cytotoxicity. A remarkable rescue of 3-fold GCase activity was observed at 100 nM for both compounds 16 and 18 after incubation (3 days) with homozygous N370S GD fibroblasts. On the contrary, the five-membered octyl derivatives 15 and 17 showed inhibitory activity towards the glucosylceramide synthase enzyme, involved in the synthesis of GlcCer, but behaved as weaker GCase inhibitors than their corresponding six-membered counterparts (Figure 6). Molecular docking studies showed that piperidines 16 and 18 bound the active site similarly to isofagomine (IFG (1), Figure 2) [34]. Figure 6. GCase inhibitory activity of alkylated pyrrolidines 15 and 17 and their piperidine analogues 16 and 18 obtained through ring expansion. The role of alkyl chain length in six-membered glycomimetics on PC activity was also investigated by Cardona and coworkers, who reported the synthesis of trihydroxypiperidines 19 and 20 (Figure 7) alkylated at C-2 with both configurations and chains of Figure 5. GCase inhibitory activity of DIX–derived guanidine and urea compounds 13 and 14. Génisson and coworkers reported how ring expansion of pyrrolidine derivatives ( 15 and 17 , Figure 6) to the piperidine ring system ( 16 and 18 , Figure 6) led to a selective targeting of GlcCer formation or hydrolysis. The authors identified in C-octyl piperidine 16 and 2-O-heptyl piperidine 18 good GCase inhibitors (IC 50 = 11 nM and 4 nM, respectively) and PCs with low cytotoxicity. A remarkable rescue of 3-fold GCase activity was observed at 100 nM for both compounds 16 and 18 after incubation (3 days) with homozygous N370S GD fibroblasts. On the contrary, the five-membered octyl derivatives 15 and 17 showed inhibitory activity towards the glucosylceramide synthase enzyme, involved in the synthesis of GlcCer, but behaved as weaker GCase inhibitors than their corresponding six-membered counterparts (Figure 6). Molecular docking studies showed that piperidines 16 and 18 bound the active site similarly to isofagomine (IFG (1), Figure 2) [34]. Pharmaceuticals 2022, 15, x FOR PEER REVIEW 5 of 26 commercial glycosidases and human recombinant enzymes: GCase and β-galactocerebrosidase (GALC). Regarding the results for GCase, only the guanidine derivatives were potent and selective inhibitors in the low nanomolar range (IC50 = 17–245 nM), probably due to the positive charge of the guanidinium group, as suggested by the authors. The guanidine derivatives were better inhibitors than the simple N-nonyl DIX (IC50 = 752 nM), and this result agrees with the docking studies performed by the authors, which highlighted additional cation–π interactions and extra hydrogen bonding in the guanidine function. The length of the lipophilic chain in the molecule also affected the inhibition: compounds with longer chains were better inhibitors. The authors carried out experiments using fibroblasts homozygous for the N370S mutation, and compound 13a (Figure 5) displayed measurable chaperone activity (1.2-fold at 1 µM). Figure 5. GCase inhibitory activity of DIX–derived guanidine and urea compounds 13 and 14. Génisson and coworkers reported how ring expansion of pyrrolidine derivatives (15 and 17, Figure 6) to the piperidine ring system (16 and 18, Figure 6) led to a selective targeting of GlcCer formation or hydrolysis. The authors identified in C-octyl piperidine 16 and 2-O-heptyl piperidine 18 good GCase inhibitors (IC50 = 11 nM and 4 nM, respectively) and PCs with low cytotoxicity. A remarkable rescue of 3-fold GCase activity was observed at 100 nM for both compounds 16 and 18 after incubation (3 days) with homozygous N370S GD fibroblasts. On the contrary, the five-membered octyl derivatives 15 and 17 showed inhibitory activity towards the glucosylceramide synthase enzyme, involved in the synthesis of GlcCer, but behaved as weaker GCase inhibitors than their corresponding six-membered counterparts (Figure 6). Molecular docking studies showed that piperidines 16 and 18 bound the active site similarly to isofagomine (IFG (1), Figure 2) [35]. Figure 6. GCase inhibitory activity of alkylated pyrrolidines 15 and 17 and their piperidine analogues 16 and 18 obtained through ring expansion. The role of alkyl chain length in six-membered glycomimetics on PC activity was also investigated by Cardona and coworkers, who reported the synthesis of trihydroxypiperidines 19 and 20 (Figure 7) alkylated at C-2 with both configurations and chains of Figure 6. GCase inhibitory activity of alkylated pyrrolidines 15 and 17 and their piperidine analogues 16 and 18 obtained through ring expansion. The role of alkyl chain length in six-membered glycomimetics on PC activity was also investigated by Cardona and coworkers, who reported the synthesis of trihydroxypiperidines 19 and 20 (Figure 7) alkylated at C-2 with both configurations and chains of different lengths [ 35 , 36 ]. The new compounds, assayed towards GCase and other lysosomal enzymes, proved to be good and selective GCase inhibitors with IC 50 in the micromolar range. Selectivity towards GCase over other lysosomal enzymes is important to avoid undesired side effects. An interesting trend in the inhibitory activity was highlighted, which was dependent on the configuration at C-2 and chain length. In particular, piperidine 20d (Figure 7) was the best inhibitor among the whole series, with an IC50 = 1.5 µM.
Pharmaceuticals 2022,15, 823 6 of 26 Pharmaceuticals 2022, 15, x FOR PEER REVIEW 6 of 26 different lengths [36,37]. The new compounds, assayed towards GCase and other lysosomal enzymes, proved to be good and selective GCase inhibitors with IC50 in the micromolar range. Selectivity towards GCase over other lysosomal enzymes is important to avoid undesired side effects. An interesting trend in the inhibitory activity was highlighted, which was dependent on the configuration at C-2 and chain length. In particular, piperidine 20d (Figure 7) was the best inhibitor among the whole series, with an IC50 = 1.5 µM. Figure 7. GCase inhibitory activity of the trihydroxypiperidine glycomimetics 19 and 20. All compounds were able to rescue the activity of mutated GCase from 1.2- to 1.9-fold in fibroblasts derived from Gaucher patients bearing the N370S/RecNcil mutations. The best GCase rescue was obtained with the octyl compound with the R configuration at C-2 20a (Figure 7), which was able to enhance GCase activity up to 1.9-fold at 50 µM in fibroblasts bearing the N370S mutation. Remarkably, in the presence of compound 20a, an 80% activity rescue (1.8-fold GCase enhancement) was measured in fibroblasts bearing the homozygous L444P mutation, which is often resistant to most PCs. With a longer chain, compound 20d was the best inhibitor of the series, but not the best pharmacological chaperone. This effect can be explained in light of the fact that during in vitro assays on cell lines, other factors play a crucial role, such as cell permeability and cell viability. The improved potency provided by a longer alkyl moiety was also concurrent with low cell viability. These data demonstrated, analogously to what happens with IFG and DIX derivatives, that the presence of a lipophilic chain of proper length plays a pivotal role on the chaperoning properties and that the alkylation of the carbon adjacent to nitrogen furnishes better PCs for GD also in the case of these trihydroxypiperidine iminosugars. 2.1.2. Five-Membered Iminosugars Five-membered iminosugars (polyhydroxylated pyrrolidines) are a group of glycomimetics that—in comparison with their six-membered analogues—have been less studied in the field of glycosidase inhibition. This family of compounds sometimes shows problems of selectivity due to their higher conformational flexibility with respect to piperidines, but the attachment of different functional groups to the pyrrolidine core can lead to more potent and selective glycosidase inhibitors [38]. Using a D-arabinose-derived nitrone as key intermediate, Parmeggiani et al. [30] developed a library of polyhydroxylated pyrrolidines, analogues of the naturally occurring iminosugar 1,4-dideoxy-1,4-imino-D-arabinitol (DAB, 21, Figure 8), in their N- or C-alkylated version (chain length of 4, 8, or 12 carbon atoms). The best results in terms of GCase inhibition were obtained with pyrrolidines bearing a longer chain (8 or 12 atom carbons, compounds 22–27, Figure 8), thus probably suggesting that these compounds better mimic the natural substrate of GCase. Unfortunately, despite the good inhibitory activity displayed for compounds 22–27 (IC50 = 0.72–150 µM, Figure 8), they did not show any chaperone activity when tested on cell lines. Figure 7. GCase inhibitory activity of the trihydroxypiperidine glycomimetics 19 and 20. All compounds were able to rescue the activity of mutated GCase from 1.2- to 1.9-fold in fibroblasts derived from Gaucher patients bearing the N370S/RecNcil mutations. The best GCase rescue was obtained with the octyl compound with the Rconfiguration at C-2 20a (Figure 7), which was able to enhance GCase activity up to 1.9-fold at 50 µ M in fibroblasts bearing the N370S mutation. Remarkably, in the presence of compound 20a , an 80% activity rescue (1.8-fold GCase enhancement) was measured in fibroblasts bearing the homozygous L444P mutation, which is often resistant to most PCs. With a longer chain, compound 20d was the best inhibitor of the series, but not the best pharmacological chaperone. This effect can be explained in light of the fact that during in vitro assays on cell lines, other factors play a crucial role, such as cell permeability and cell viability. The improved potency provided by a longer alkyl moiety was also concurrent with low cell viability. These data demonstrated, analogously to what happens with IFG and DIX derivatives, that the presence of a lipophilic chain of proper length plays a pivotal role on the chaperoning properties and that the alkylation of the carbon adjacent to nitrogen furnishes better PCs for GD also in the case of these trihydroxypiperidine iminosugars. 2.1.2. Five-Membered Iminosugars Five-membered iminosugars (polyhydroxylated pyrrolidines) are a group of glycomimetics that—in comparison with their six-membered analogues—have been less studied in the field of glycosidase inhibition. This family of compounds sometimes shows problems of selectivity due to their higher conformational flexibility with respect to piperidines, but the attachment of different functional groups to the pyrrolidine core can lead to more potent and selective glycosidase inhibitors [37]. Using a D-arabinose-derived nitrone as key intermediate, Parmeggiani et al. [ 29 ] developed a library of polyhydroxylated pyrrolidines, analogues of the naturally occurring iminosugar 1,4-dideoxy-1,4-imino-D-arabinitol (DAB, 21 , Figure 8), in their N- or C-alkylated version (chain length of 4, 8, or 12 carbon atoms). The best results in terms of GCase inhibition were obtained with pyrrolidines bearing a longer chain ( 8 or 12 atom carbons , compounds 22 – 27 , Figure 8), thus probably suggesting that these compounds better mimic the natural substrate of GCase. Unfortunately, despite the good inhibitory activity displayed for compounds 22 – 27 (IC 50 = 0.72–150 µ M, Figure 8), they did not show any chaperone activity when tested on cell lines.
Pharmaceuticals 2022,15, 823 7 of 26 Pharmaceuticals 2022, 15, x FOR PEER REVIEW 7 of 26 Figure 8. N- and C-alkylated pyrrolidine derivatives analogues of DAB (1) as GCase inhibitors. Conversely, Kato et al. [39] prepared DAB (21, Figure 8) and LAB (1,4-dideoxy-1,4-imino-L-arabinitol, ent-21, Figure 9) C-alkylated pyrrolidines bearing a butyl or octyl chain (compounds 23, 28, ent-23 and ent-28, Figure 9). The inhibition results towards GCase showed that the best candidates were the DAB-configured analogues, and among them, the insertion of an octyl group (23) gave the best inhibitory activity. So, in a next step, the length of the alkyl chain was changed, ranging from 4 to 13 carbon atoms (derivatives 27 and 29–35, Figure 9). The results showed that the longer the alkyl chain is, the stronger is the inhibition, with optimal results obtained for the tridecyl analogue 35 with an IC50 value of 0.77 µM. The derivatives 29, 32, and 35 were evaluated as chaperones in fibroblasts with the homozygous N370S mutation and compared with isofagomine (IFG (1), Figure 2), used as a positive control. Compound 35 was the best chaperone candidate, with a GCase rescue similar to that observed with IFG (around 1.5-fold at 5 µM) but at a 10-fold lower concentration (0.5 µM). Figure 9. DAB and LAB alkylated analogues and their activity towards GCase. The presence of the hydroxymethyl moiety in the pyrrolidine skeleton makes an important contribution to glycosidase inhibition [40], but its removal can lead to more hydrophobic compounds that can better cross the cell membranes. Indeed, Castellan et al. [41] reported the synthesis of a couple of enantiomeric pyrrolidines, 36 and ent-36 (Figure 10), and their evaluation as GCase inhibitors and activity enhancers in fibroblasts bearing the homozygous N370S mutation. These compounds can be also considered DAB (21, Figure 8) and LAB (ent-21, Figure 9) analogues, respectively, but lacking the hydroxymethyl moiety. The removal of this group was advantageous for GCase inhibition, as both compounds were more potent inhibitors than the corresponding hydroxymethylated counterparts reported by Kato et al. (compounds 36 vs. 23 and ent-36 vs. ent-23) [39]. Figure 8. N- and C-alkylated pyrrolidine derivatives analogues of DAB (1) as GCase inhibitors. Conversely, Kato et al. [ 38 ] prepared DAB ( 21 , Figure 8) and LAB (1,4-dideoxy-1,4- imino-L-arabinitol, ent-21 , Figure 9)C-alkylated pyrrolidines bearing a butyl or octyl chain (compounds 23 , 28 , ent-23 and ent-28 , Figure 9). The inhibition results towards GCase showed that the best candidates were the DAB-configured analogues, and among them, the insertion of an octyl group ( 23 ) gave the best inhibitory activity. So, in a next step, the length of the alkyl chain was changed, ranging from 4 to 13 carbon atoms (derivatives 27 and 29 – 35 , Figure 9). The results showed that the longer the alkyl chain is, the stronger is the inhibition, with optimal results obtained for the tridecyl analogue 35 with an IC 50 value of 0.77 µ M. The derivatives 29 , 32 , and 35 were evaluated as chaperones in fibroblasts with the homozygous N370S mutation and compared with isofagomine (IFG ( 1 ), Figure 2), used as a positive control. Compound 35 was the best chaperone candidate, with a GCase rescue similar to that observed with IFG (around 1.5-fold at 5 µ M) but at a 10-fold lower concentration (0.5 µM). Pharmaceuticals 2022, 15, x FOR PEER REVIEW 7 of 26 Figure 8. N- and C-alkylated pyrrolidine derivatives analogues of DAB (1) as GCase inhibitors. Conversely, Kato et al. [39] prepared DAB (21, Figure 8) and LAB (1,4-dideoxy-1,4-imino-L-arabinitol, ent-21, Figure 9) C-alkylated pyrrolidines bearing a butyl or octyl chain (compounds 23, 28, ent-23 and ent-28, Figure 9). The inhibition results towards GCase showed that the best candidates were the DAB-configured analogues, and among them, the insertion of an octyl group (23) gave the best inhibitory activity. So, in a next step, the length of the alkyl chain was changed, ranging from 4 to 13 carbon atoms (derivatives 27 and 29–35, Figure 9). The results showed that the longer the alkyl chain is, the stronger is the inhibition, with optimal results obtained for the tridecyl analogue 35 with an IC50 value of 0.77 µM. The derivatives 29, 32, and 35 were evaluated as chaperones in fibroblasts with the homozygous N370S mutation and compared with isofagomine (IFG (1), Figure 2), used as a positive control. Compound 35 was the best chaperone candidate, with a GCase rescue similar to that observed with IFG (around 1.5-fold at 5 µM) but at a 10-fold lower concentration (0.5 µM). Figure 9. DAB and LAB alkylated analogues and their activity towards GCase. The presence of the hydroxymethyl moiety in the pyrrolidine skeleton makes an important contribution to glycosidase inhibition [40], but its removal can lead to more hydrophobic compounds that can better cross the cell membranes. Indeed, Castellan et al. [41] reported the synthesis of a couple of enantiomeric pyrrolidines, 36 and ent-36 (Figure 10), and their evaluation as GCase inhibitors and activity enhancers in fibroblasts bearing the homozygous N370S mutation. These compounds can be also considered DAB (21, Figure 8) and LAB (ent-21, Figure 9) analogues, respectively, but lacking the hydroxymethyl moiety. The removal of this group was advantageous for GCase inhibition, as both compounds were more potent inhibitors than the corresponding hydroxymethylated counterparts reported by Kato et al. (compounds 36 vs. 23 and ent-36 vs. ent-23) [39]. Figure 9. DAB and LAB alkylated analogues and their activity towards GCase. The presence of the hydroxymethyl moiety in the pyrrolidine skeleton makes an important contribution to glycosidase inhibition [ 39 ], but its removal can lead to more hydrophobic compounds that can better cross the cell membranes. Indeed, Castellan et al. [ 40 ] reported the synthesis of a couple of enantiomeric pyrrolidines, 36 and ent-36 (Figure 10), and their evaluation as GCase inhibitors and activity enhancers in fibroblasts bearing the homozygous N370S mutation. These compounds can be also considered DAB ( 21 , Figure 8) and LAB ( ent-21 , Figure 9) analogues, respectively, but lacking the hydroxymethyl moiety. The removal of this group was advantageous for GCase inhibition, as both compounds were more potent inhibitors than the corresponding hydroxymethylated counterparts reported by Kato et al. (compounds 36 vs. 23 and ent-36 vs. ent-23) [38].
Pharmaceuticals 2022,15, 823 8 of 26 Pharmaceuticals 2022, 15, x FOR PEER REVIEW 8 of 26 Figure 10. Compounds 36 and ent-36 lacking the hydroxymethyl moiety of DAB and LAB. Compound 36, with a non-competitive inhibition mode, was two orders of magnitude more potent than competitive ent-36. The inhibitory mode of both compounds was further confirmed by the application of Theorell’s graphical method [42] and through docking simulations, which showed a tight alignment of ent-36 with NN-DNJ (6, Figure 2) and IFG (1, Figure 2) and the retention of the main hydrogen-bond interactions within the GCase active site. The chaperone activity of both compounds was measured in fibroblasts with the homozygous N370S mutation. Compound 36 gave the best results, showing an activity enhancement comparable to that observed for NN-DNJ (6) and IFG (1), used as reference compounds, i.e., 1.5-fold or 2-fold at 3 µM independently of the chosen cell lines. Indeed, it is worth noting that intracellular enzymatic enhancement may highly depend on the chosen cell lines, given the same N370S mutation. Nevertheless, the enhancement of ent-36 (1.6-fold at 3 µM) is also significant, despite being a less potent competitive inhibitor (IC50 = 59.6 µM), demonstrating that not always the more potent inhibitors are also the best chaperone candidates. Not only the insertion of alkyl chains on the pyrrolidine core can improve the biological properties towards the GCase enzyme. The introduction of (hetero)aromatic moieties exploiting copper(I)-catalyzed alkyne-azide cycloaddition (CuAAC) can also afford more potent and selective GCase inhibitors [43], probably due to the establishment of additional interactions with the enzyme, allowing at the same time improved cell permeability and cell trafficking. In this context, Martínez-Bailén et al. [44] reported the synthesis of a set of epimeric dihydroxypyrrolidines containing an aromatic moiety attached to the triazole generated in the CuAAC reaction. This new family of inhibitors exhibited a tunable biological activity towards GCase in the function of the substitution pattern of the aromatic ring, the 3,5-disubstituted derivatives being the most potent inhibitors (compounds 37–56, Figure 11). The best inhibitors of the library (compounds 44, 45, and 53) were able to increase the in vitro activity of GCase in Gaucher patient fibroblasts with the homozygous N370S mutation. Specifically, compound 45 increased the GCase activity 2-fold at 10 µM concentration, an enhancement that is comparable to that observed for isofagomine used as positive control at the same concentration. The crystal structure of complex 53:GCase and docking experiments revealed key interactions between the inhibitor and the enzyme that supported the importance of the aryltriazole moiety and was in agreement with the improved trafficking of GCase observed in immunolabeling experiments performed by the authors. (2Sor 2R) 2 H N HO OH NN N HH H OH H CH2OH HOMe H F F H Cl H Br H CF3H OMe H 3 4 5 IC50 ( M) 11 28 27 34 102 187 39 31 23 24 3.8 5.7 1.5 1.3 0.83 1.4 0.95 1.6 8.3 7.3 2S2R Compound 2S2R 37 47 38 48 39 49 40 50 41 51 42 52 43 53 44 54 45 55 46 56 Figure 11. Dihydroxypyrrolidines 37–56 decorated with an aryltriazole moiety. Figure 10. Compounds 36 and ent-36 lacking the hydroxymethyl moiety of DAB and LAB. Compound 36 , with a non-competitive inhibition mode, was two orders of magnitude more potent than competitive ent-36 . The inhibitory mode of both compounds was further confirmed by the application of Theorell’s graphical method [ 41 ] and through docking simulations, which showed a tight alignment of ent-36 with NN-DNJ ( 6 , Figure 2) and IFG ( 1 , Figure 2) and the retention of the main hydrogen-bond interactions within the GCase active site. The chaperone activity of both compounds was measured in fibroblasts with the homozygous N370S mutation. Compound 36 gave the best results, showing an activity enhancement comparable to that observed for NN-DNJ ( 6 ) and IFG ( 1 ), used as reference compounds, i.e., 1.5-fold or 2-fold at 3 µ M independently of the chosen cell lines. Indeed, it is worth noting that intracellular enzymatic enhancement may highly depend on the chosen cell lines, given the same N370S mutation. Nevertheless, the enhancement of ent-36 (1.6-fold at 3 µ M) is also significant, despite being a less potent competitive inhibitor ( IC50 = 59.6 µM ), demonstrating that not always the more potent inhibitors are also the best chaperone candidates. Not only the insertion of alkyl chains on the pyrrolidine core can improve the biological properties towards the GCase enzyme. The introduction of (hetero)aromatic moieties exploiting copper(I)-catalyzed alkyne-azide cycloaddition (CuAAC) can also afford more potent and selective GCase inhibitors [ 42 ], probably due to the establishment of additional interactions with the enzyme, allowing at the same time improved cell permeability and cell trafficking. In this context, Martínez-Bailén et al. [ 43 ] reported the synthesis of a set of epimeric dihydroxypyrrolidines containing an aromatic moiety attached to the triazole generated in the CuAAC reaction. This new family of inhibitors exhibited a tunable biological activity towards GCase in the function of the substitution pattern of the aromatic ring, the 3,5-disubstituted derivatives being the most potent inhibitors (compounds 37 – 56 , Figure 11). The best inhibitors of the library (compounds 44 , 45 , and 53 ) were able to increase the in vitro activity of GCase in Gaucher patient fibroblasts with the homozygous N370S mutation. Specifically, compound 45 increased the GCase activity 2-fold at 10 µ M concentration, an enhancement that is comparable to that observed for isofagomine used as positive control at the same concentration. The crystal structure of complex 53 :GCase and docking experiments revealed key interactions between the inhibitor and the enzyme that supported the importance of the aryltriazole moiety and was in agreement with the improved trafficking of GCase observed in immunolabeling experiments performed by the authors. Pharmaceuticals 2022, 15, x FOR PEER REVIEW 8 of 26 Figure 10. Compounds 36 and ent-36 lacking the hydroxymethyl moiety of DAB and LAB. Compound 36, with a non-competitive inhibition mode, was two orders of magnitude more potent than competitive ent-36. The inhibitory mode of both compounds was further confirmed by the application of Theorell’s graphical method [42] and through docking simulations, which showed a tight alignment of ent-36 with NN-DNJ (6, Figure 2) and IFG (1, Figure 2) and the retention of the main hydrogen-bond interactions within the GCase active site. The chaperone activity of both compounds was measured in fibroblasts with the homozygous N370S mutation. Compound 36 gave the best results, showing an activity enhancement comparable to that observed for NN-DNJ (6) and IFG (1), used as reference compounds, i.e., 1.5-fold or 2-fold at 3 µM independently of the chosen cell lines. Indeed, it is worth noting that intracellular enzymatic enhancement may highly depend on the chosen cell lines, given the same N370S mutation. Nevertheless, the enhancement of ent-36 (1.6-fold at 3 µM) is also significant, despite being a less potent competitive inhibitor (IC50 = 59.6 µM), demonstrating that not always the more potent inhibitors are also the best chaperone candidates. Not only the insertion of alkyl chains on the pyrrolidine core can improve the biological properties towards the GCase enzyme. The introduction of (hetero)aromatic moieties exploiting copper(I)-catalyzed alkyne-azide cycloaddition (CuAAC) can also afford more potent and selective GCase inhibitors [43], probably due to the establishment of additional interactions with the enzyme, allowing at the same time improved cell permeability and cell trafficking. In this context, Martínez-Bailén et al. [44] reported the synthesis of a set of epimeric dihydroxypyrrolidines containing an aromatic moiety attached to the triazole generated in the CuAAC reaction. This new family of inhibitors exhibited a tunable biological activity towards GCase in the function of the substitution pattern of the aromatic ring, the 3,5-disubstituted derivatives being the most potent inhibitors (compounds 37–56, Figure 11). The best inhibitors of the library (compounds 44, 45, and 53) were able to increase the in vitro activity of GCase in Gaucher patient fibroblasts with the homozygous N370S mutation. Specifically, compound 45 increased the GCase activity 2-fold at 10 µM concentration, an enhancement that is comparable to that observed for isofagomine used as positive control at the same concentration. The crystal structure of complex 53:GCase and docking experiments revealed key interactions between the inhibitor and the enzyme that supported the importance of the aryltriazole moiety and was in agreement with the improved trafficking of GCase observed in immunolabeling experiments performed by the authors. (2Sor 2R) 2 H N HO OH NN N HH H OH H CH2OH HOMe H F F H Cl H Br H CF3H OMe H 3 4 5 IC50 ( M) 11 28 27 34 102 187 39 31 23 24 3.8 5.7 1.5 1.3 0.83 1.4 0.95 1.6 8.3 7.3 2S2R Compound 2S2R 37 47 38 48 39 49 40 50 41 51 42 52 43 53 44 54 45 55 46 56 Figure 11. Dihydroxypyrrolidines 37–56 decorated with an aryltriazole moiety. Figure 11. Dihydroxypyrrolidines 37–56 decorated with an aryltriazole moiety.
Pharmaceuticals 2022,15, 823 9 of 26 2.1.3. Bicyclic Iminosugars Calystegines are polyhydroxy nortropane alkaloids that display GCase selectivity over other lysosomal enzymes [ 44 ]. García-Moreno et al. [ 45 ] reported the synthesis and biological evaluation of several amphiphilic glycomimetics presenting a rigid nortropane skeleton based on 1,6-anhydro-L-idonojirimycin, formulated as the corresponding inclusion complexes with β -cyclodextrin ( β CD). The insertion of a terminal polyfluorinated fragment allowed the improvement of the complex stability and GCase-rescue capabilities due to additional interactions with the protein surface according to medicinal chemistry principles [ 46 , 47 ], improving membrane crossing, also including the blood–brain barrier (BBB). The authors encapsulated their fluorinated derivatives in form of β -cyclodextrin complexes, taking advantage of the affinity of this kind of compound for the cavity of β - cyclodextrin and avoiding the intrinsic aggregation previously observed for polyfluorinated derivatives [48], thus gaining in drug availability and cell permeability. The new compounds presented an alkyl or fluorinated chain of different lengths, and all of them showed strong competitive inhibition towards the mammalian β -glucosidase enzymes selectively. The encapsulated β CD complexes (K i = 0.09–8.2 µ M) behaved as stronger inhibitors than compounds 57 – 60 (K i = 0.33–90 µ M) (Figure 12) alone (without encapsulation). In the case of GCase, the complexes were better inhibitors at pH 7 than at pH 5, which is a positive feature for a chaperone candidate. Pharmaceuticals 2022, 15, x FOR PEER REVIEW 9 of 26 2.1.3. Bicyclic Iminosugars Calystegines are polyhydroxy nortropane alkaloids that display GCase selectivity over other lysosomal enzymes [45]. García-Moreno et al. [46] reported the synthesis and biological evaluation of several amphiphilic glycomimetics presenting a rigid nortropane skeleton based on 1,6-anhydro-L-idonojirimycin, formulated as the corresponding inclusion complexes with β-cyclodextrin (βCD). The insertion of a terminal polyfluorinated fragment allowed the improvement of the complex stability and GCase-rescue capabilities due to additional interactions with the protein surface according to medicinal chemistry principles [47,48], improving membrane crossing, also including the blood–brain barrier (BBB). The authors encapsulated their fluorinated derivatives in form of β-cyclodextrin complexes, taking advantage of the affinity of this kind of compound for the cavity of β-cyclodextrin and avoiding the intrinsic aggregation previously observed for polyfluorinated derivatives [49], thus gaining in drug availability and cell permeability. The new compounds presented an alkyl or fluorinated chain of different lengths, and all of them showed strong competitive inhibition towards the mammalian β-glucosidase enzymes selectively. The encapsulated βCD complexes (Ki = 0.09–8.2 µM) behaved as stronger inhibitors than compounds 57–60 (Ki = 0.33–90 µM) (Figure 12) alone (without encapsulation). In the case of GCase, the complexes were better inhibitors at pH 7 than at pH 5, which is a positive feature for a chaperone candidate. Figure 12. Polyfluorinated nortropanes 57–60. The complexes of 57–60 with βCD were tested as chaperones in fibroblasts of Gaucher patients bearing the following mutations: N370S/N370S or N370S/84GG (non-neuronopathic, type 1 GD), V230G/R296X or L444P/P415R (acute neuronopathic, type 2 GD), and N188S/G183W or L444P/L444P (neuronopathic, type 3 GD). The best enhancements observed for each mutation are summarized in Table 1. From the results, it can be concluded that the complex 58:βCD was the one with the widest activity spectrum (Table 1, entries 1, 2, and 4–6). Further immunolabeling experiments demonstrated that the chaperone-action mechanism involved rescuing and trafficking of GCase, as the recovered enzyme was colocalized in the lysosome and no longer in the ER after treatment of the cells with 58:βCD. The results on the L444P/L444P lines are remarkable (Table 1, entry 6), since these cell lines are resistant to most PCs. Table 1. Enhancements observed for each Gaucher disease variant. Entry GCase Variant Severity Best Enhancement Concentration Complex 1 N370S/N370S Type I 1.5 - fold 2 µM 58 :βCD 2 N370S/84GG 2.8 - fold 20 µM 58 :βCD 3 V230G/R296X Type II 2.7-fold 20 µM 57:βCD 4 L444P/P415R 2.9-fold 20 µM 58:βCD 5 N188S/G183W Type III 1.8-fold 20 µM 57:βCD and 58:βCD 6 L444P/L444P 2.8-fold 20 µM 58:βCD Pyrrolizidines are another class of bicyclic iminosugars that has been widely studied in the field of glycosidase inhibition [50]. Parmeggiani et al. [30] completed their screen- Figure 12. Polyfluorinated nortropanes 57–60. The complexes of 57 – 60 with β CD were tested as chaperones in fibroblasts of Gaucher patients bearing the following mutations: N370S/N370S or N370S/84GG (non-neuronopathic, type 1 GD), V230G/R296X or L444P/P415R (acute neuronopathic, type 2 GD), and N188S/ G183W or L444P/L444P (neuronopathic, type 3 GD). The best enhancements observed for each mutation are summarized in Table 1. From the results, it can be concluded that the complex 58 : β CD was the one with the widest activity spectrum (Table 1, entries 1, 2, and 4–6). Further immunolabeling experiments demonstrated that the chaperone-action mechanism involved rescuing and trafficking of GCase, as the recovered enzyme was colocalized in the lysosome and no longer in the ER after treatment of the cells with 58 : β CD. The results on the L444P/L444P lines are remarkable (Table 1, entry 6), since these cell lines are resistant to most PCs. Table 1. Enhancements observed for each Gaucher disease variant. Entry GCase Variant Severity Best Enhancement Concentration Complex 1 N370S/N370S Type I 1.5-fold 2 µM58:βCD 2 N370S/84GG 2.8-fold 20 µM58:βCD 3 V230G/R296X Type II 2.7-fold 20 µM57:βCD 4 L444P/P415R 2.9-fold 20 µM58:βCD 5 N188S/G183W Type III 1.8-fold 20 µM57:βCD and 58:βCD 6 L444P/L444P 2.8-fold 20 µM58:βCD Pyrrolizidines are another class of bicyclic iminosugars that has been widely studied in the field of glycosidase inhibition [ 49 ]. Parmeggiani et al. [ 29 ] completed their screening on pyrrolidines and piperidines with several pyrrolizidine iminosugars obtained from nitrones. Unfortunately, the great majority of pyrrolizidines did not impart any relevant inhibition
Pharmaceuticals 2022,15, 823 16 of 26 moiety on the inhibitory profile. After a screening towards a panel of commercial glycosidases, derivatives 93 – 96 (Figure 21) were the most promising candidates among all the compounds prepared and were subsequently tested towards human GCase. Pharmaceuticals 2022, 15, x FOR PEER REVIEW 16 of 26 O N H HO HO OH H H O H N O O14 O 14 93, IC50 = 41 M O N H HO HO OH H H O H N OH O 14 94, IC50 = 23 M O N H HO HO OH H H O NH2 O O14 95, IC50 = 49 M 96, IC50 = 67 M O N H HO HO OH H H O NHAc O O14 Figure 21. Pyranoid-type glycomimetics 93–96. From the results obtained, it was deduced that the presence of an O-acyl substituent in the aglycone was detrimental to inhibitory activity, as compound 94 (Ki = 20 µM at pH 7) was a 1.5 to 2.5-fold more potent inhibitor than derivatives 93, 95, and 96 (Ki = 33–52 µM at pH 7). The authors also observed that compounds 93–96 behaved as stronger inhibitors of GCase at pH 7 than at pH 5. These compounds were assayed as chaperones in fibroblasts of GD patients with the N370S/N370S, F213I/F213I, or L444P/L444P mutations, associated with type 1, 2, and 3 GD, respectively. Only compound 94 displayed a significant enhancement in GCase activity at 20 µM for the N370S/N370S and F213I/F213I mutations (1.3- and 1.5-fold increase, respectively). To justify the better biological properties of compound 94 over derivatives 93, 95, and 96, molecular dynamics (MD) simulations were performed and the calculations showed that the pyranoid glycone moiety established hydrogen bonding in a similar way to other competitive inhibitors of the glycomimetic family. The amide moiety also participated in the formation of hydrogen bonds with the enzyme, thus influencing the orientation of the aliphatic palmitoyl chain towards the hydrophobic region that gives access to the active site of the enzyme. This shift allowed the gain of additional interactions that reinforced interaction with the GCase enzyme. 2.3. Miscellaneous Examples The use of activity-based probes (ABPs) can be helpful to understand the stabilization mechanism of GCase through inhibitor binding. Ben Bdira et al. [78] described the use of cyclophellitol-derived ABPs that bind the GCase active site irreversibly to the catalytic nucleophile E340. The amphiphilic ABPs studied in vitro and in situ displayed a fluorescent hydrophobic green or red BODIPY tail (compounds 97 and 98, Figure 22). These compounds were able to enhance thermal stability of GCase and sensitivity to tryptic digestion. The findings pointed out that ABP labeling stabilizes GCase against proteolytic degradation in the lysosomes and did not avoid N-glycan modifications by lysosomal glycosidases. These types of compounds can be valuable marker tools to study the contribution of hydrophobic interactions to GCase stabilization by selective labeling of the active form of GCase in living cells and laboratory animals. Figure 21. Pyranoid-type glycomimetics 93–96. From the results obtained, it was deduced that the presence of an O-acyl substituent in the aglycone was detrimental to inhibitory activity, as compound 94 (K i = 20 µ M at pH 7) was a 1.5 to 2.5-fold more potent inhibitor than derivatives 93 , 95 , and 96 ( Ki= 33–52 µM at pH 7). The authors also observed that compounds 93 – 96 behaved as stronger inhibitors of GCase at pH 7 than at pH 5. These compounds were assayed as chaperones in fibroblasts of GD patients with the N370S/N370S, F213I/F213I, or L444P/L444P mutations, associated with type 1, 2, and 3 GD, respectively. Only compound 94 displayed a significant enhancement in GCase activity at 20 µ M for the N370S/N370S and F213I/F213I mutations (1.3- and 1.5-fold increase, respectively). To justify the better biological properties of compound 94 over derivatives 93 , 95 , and 96 , molecular dynamics (MD) simulations were performed and the calculations showed that the pyranoid glycone moiety established hydrogen bonding in a similar way to other competitive inhibitors of the glycomimetic family. The amide moiety also participated in the formation of hydrogen bonds with the enzyme, thus influencing the orientation of the aliphatic palmitoyl chain towards the hydrophobic region that gives access to the active site of the enzyme. This shift allowed the gain of additional interactions that reinforced interaction with the GCase enzyme. 2.3. Miscellaneous Examples The use of activity-based probes (ABPs) can be helpful to understand the stabilization mechanism of GCase through inhibitor binding. Ben Bdira et al. [ 77 ] described the use of cyclophellitol-derived ABPs that bind the GCase active site irreversibly to the catalytic nucleophile E340. The amphiphilic ABPs studied in vitro and in situ displayed a fluorescent hydrophobic green or red BODIPY tail (compounds 97 and 98 , Figure 22). These compounds were able to enhance thermal stability of GCase and sensitivity to tryptic digestion. The findings pointed out that ABP labeling stabilizes GCase against proteolytic degradation in the lysosomes and did not avoid N-glycan modifications by lysosomal glycosidases. These types of compounds can be valuable marker tools to study the contribution of hydrophobic interactions to GCase stabilization by selective labeling of the active form of GCase in living cells and laboratory animals.
Pharmaceuticals 2022,15, 823 17 of 26 Pharmaceuticals 2022, 15, x FOR PEER REVIEW 17 of 26 Figure 22. Fluorescent cyclophellitol derivatives 97 and 98. In 2009, Maegawa et al. screened a library of 1040 FDA-approved drugs through a thermal denaturation assay using wild-type GCase, and identified ambroxol (ABX, 99, Figure 23), a cough medicine, as a pH-dependent, mixed-type inhibitor of GCase [79]. In particular, ABX (99) showed its maximal inhibitory activity at neutral pH (8.1 µM), but turned out to be a negligible inhibitor of GCase at acidic pH (31 µM) that can be found in the lysosomes, a crucial tandem of properties for a good chaperone candidate [80]. Figure 23. Ambroxol (ABX, 99), a mixed-type GCase inhibitor. In vitro screening of ABX demonstrated low cytotoxicity (60 µM in GD patients’ fibroblasts) and good chaperoning activity with F213I/F213I, R120W/L444P, N188S/G193W, N370S/N370S, and F213I/L444P mutant cells, while no effects were observed with the L444P/L444P mutant cells or the control cell line. The chaperoning activity and toxicity of ABX (99) were also tested in a wild-type mouse model, showing increased GCase activity in some tissues (namely, cerebellum, heart, and spleen) and demonstrating that ABX (99) penetrates the BBB, exerting its activity as PC in the brain [81,82]. However, after a pilot study was carried out in 2013 to assess the tolerability and efficacy of ABX (99) as a PC in patients with symptomatic type 1 GD [83], this PC still appears stuck in phase II of the clinical trial [33]. In addition, ABX (99) is currently being evaluated in a phase II trial involving 75 patients with moderate PD [84], and preliminary data indicate good brain distribution and safety profile [85]. 3. Allosteric Enhancers The use of inhibitory chaperones can be quite challenging, considering that GCase needs to overcome the inhibitory effect in the lysosomes once it is properly folded in order to carry out its biological action. As such, the search for new PCs that do not bind the active site of the enzyme is an emerging alternative that has gained interest in the last few years. In particular, since ambroxol was first identified as a chaperone for GCase through high-throughput screening (HTS), this technique has turned out to be useful for the Figure 22. Fluorescent cyclophellitol derivatives 97 and 98. In 2009, Maegawa et al. screened a library of 1040 FDA-approved drugs through a thermal denaturation assay using wild-type GCase, and identified ambroxol (ABX, 99 , Figure 23), a cough medicine, as a pH-dependent, mixed-type inhibitor of GCase [ 78 ]. In particular, ABX ( 99 ) showed its maximal inhibitory activity at neutral pH (8.1 µ M), but turned out to be a negligible inhibitor of GCase at acidic pH (31 µ M) that can be found in the lysosomes, a crucial tandem of properties for a good chaperone candidate [79]. Pharmaceuticals 2022, 15, x FOR PEER REVIEW 17 of 26 Figure 22. Fluorescent cyclophellitol derivatives 97 and 98. In 2009, Maegawa et al. screened a library of 1040 FDA-approved drugs through a thermal denaturation assay using wild-type GCase, and identified ambroxol (ABX, 99, Figure 23), a cough medicine, as a pH-dependent, mixed-type inhibitor of GCase [79]. In particular, ABX (99) showed its maximal inhibitory activity at neutral pH (8.1 µM), but turned out to be a negligible inhibitor of GCase at acidic pH (31 µM) that can be found in the lysosomes, a crucial tandem of properties for a good chaperone candidate [80]. Figure 23. Ambroxol (ABX, 99), a mixed-type GCase inhibitor. In vitro screening of ABX demonstrated low cytotoxicity (60 µM in GD patients’ fibroblasts) and good chaperoning activity with F213I/F213I, R120W/L444P, N188S/G193W, N370S/N370S, and F213I/L444P mutant cells, while no effects were observed with the L444P/L444P mutant cells or the control cell line. The chaperoning activity and toxicity of ABX (99) were also tested in a wild-type mouse model, showing increased GCase activity in some tissues (namely, cerebellum, heart, and spleen) and demonstrating that ABX (99) penetrates the BBB, exerting its activity as PC in the brain [81,82]. However, after a pilot study was carried out in 2013 to assess the tolerability and efficacy of ABX (99) as a PC in patients with symptomatic type 1 GD [83], this PC still appears stuck in phase II of the clinical trial [33]. In addition, ABX (99) is currently being evaluated in a phase II trial involving 75 patients with moderate PD [84], and preliminary data indicate good brain distribution and safety profile [85]. 3. Allosteric Enhancers The use of inhibitory chaperones can be quite challenging, considering that GCase needs to overcome the inhibitory effect in the lysosomes once it is properly folded in order to carry out its biological action. As such, the search for new PCs that do not bind the active site of the enzyme is an emerging alternative that has gained interest in the last few years. In particular, since ambroxol was first identified as a chaperone for GCase through high-throughput screening (HTS), this technique has turned out to be useful for the Figure 23. Ambroxol (ABX, 99), a mixed-type GCase inhibitor. In vitro screening of ABX demonstrated low cytotoxicity (60 µ M in GD patients’ fibroblasts) and good chaperoning activity with F213I/F213I, R120W/L444P, N188S/G193W, N370S/N370S, and F213I/L444P mutant cells, while no effects were observed with the L444P/L444P mutant cells or the control cell line. The chaperoning activity and toxicity of ABX ( 99 ) were also tested in a wild-type mouse model, showing increased GCase activity in some tissues (namely, cerebellum, heart, and spleen) and demonstrating that ABX ( 99 ) penetrates the BBB, exerting its activity as PC in the brain [ 80 , 81 ]. However, after a pilot study was carried out in 2013 to assess the tolerability and efficacy of ABX ( 99 ) as a PC in patients with symptomatic type 1 GD [ 82 ], this PC still appears stuck in phase II of the clinical trial [ 32 ]. In addition, ABX ( 99 ) is currently being evaluated in a phase II trial involving 75 patients with moderate PD [ 83 ], and preliminary data indicate good brain distribution and safety profile [84]. 3. Allosteric Enhancers The use of inhibitory chaperones can be quite challenging, considering that GCase needs to overcome the inhibitory effect in the lysosomes once it is properly folded in order to carry out its biological action. As such, the search for new PCs that do not bind the active site of the enzyme is an emerging alternative that has gained interest in the last few years. In particular, since ambroxol was first identified as a chaperone for GCase through high-throughput screening (HTS), this technique has turned out to be useful for the search of other non-carbohydrate-derived molecules with potential as allosteric binders of GCase [85].
Pharmaceuticals 2022,15, 823 18 of 26 Compounds NCGC607 ( 100 ) and NCGC758 ( 101 ) were discovered in a second HTS of a library of small molecules composed of 250,000 compounds (Figure 24) [ 86 ]. Aflaki et al. [ 87 ] studied the treatment of the cells of five patients with GD type 1 or 2 with or without PD with the noninhibitory salicylic acid derivative NCGC607 ( 100 ). The cells showed restored GCase activity and protein levels, reduced glycolipid storage, and reduced α -synuclein accumulation in patients with PD. These results also suggested that compound NCGC607 ( 100 ) chaperoned mutations other than N370S, as enhanced activity was observed in patients with type 2 GD with the L444P mutation. Compound NCGC758 ( 101 ), with a pyrazolopyrimidine moiety in its structure, also demonstrated beneficial properties for the treatment of GD. Pharmaceuticals 2022, 15, x FOR PEER REVIEW 18 of 26 search of other non-carbohydrate-derived molecules with potential as allosteric binders of GCase [86]. Compounds NCGC607 (100) and NCGC758 (101) were discovered in a second HTS of a library of small molecules composed of 250,000 compounds (Figure 24) [87]. Aflaki et al. [88] studied the treatment of the cells of five patients with GD type 1 or 2 with or without PD with the noninhibitory salicylic acid derivative NCGC607 (100). The cells showed restored GCase activity and protein levels, reduced glycolipid storage, and reduced α-synuclein accumulation in patients with PD. These results also suggested that compound NCGC607 (100) chaperoned mutations other than N370S, as enhanced activity was observed in patients with type 2 GD with the L444P mutation. Compound NCGC758 (101), with a pyrazolopyrimidine moiety in its structure, also demonstrated beneficial properties for the treatment of GD. Figure 24. Non-carbohydrate-derived allosteric enhancers 100–104. Sun and Wang reported a screening of noninhibitory compounds and found that the racemic mixture 102 (Figure 24) behaved as a good enhancer (ca 8-fold at 10 µM) in mouse fibroblasts bearing the V394L/V394L mutation [89]. In this context, Zheng et al. identified a series of extremely potent non-iminosugar GCase modulators through a systematic structure–activity relationship (SAR) study on quinazoline derivatives. In particular, compound JZ-4109 (103, Figure 24) was able to significantly increase GCase protein abundance and GCase activity in homozygous N370S-mutant fibroblast cells from a type 1 GD patient (about 2-fold at 2 µM) [90]. Even more interestingly, the authors characterized (by native mass spectrometry and X-ray crystallography) an allosteric binding site for these modulators by conducting a covalent modification of a lysine residue close to a properly modified ligand. Through transmission electron microscopy (TEM) experiments, they also provided insight into the mechanism of action of 103, suggesting that GCase stabilization is due to the ability of the lig- and to induce GCase dimerization [91]. A further confirmation of the role played by dimerization in GCase activation was recently provided by Rodríguez Sarmiento and coworkers. Indeed, the authors observed through analytical ultracentrifugation (AUC) that GCase dimerization was induced by the pyrrolo[2,3-b]pyrazine 104 (Figure 24), identified by testing on a cellular assay 400 diverse heterocyclic compounds, selected according to the literature and filtered by molecular properties. The GCase activator that emerged from this study did not bind to the Figure 24. Non-carbohydrate-derived allosteric enhancers 100–104. Sun and Wang reported a screening of noninhibitory compounds and found that the racemic mixture 102 (Figure 24) behaved as a good enhancer (ca 8-fold at 10 µ M) in mouse fibroblasts bearing the V394L/V394L mutation [88]. In this context, Zheng et al. identified a series of extremely potent non-iminosugar GCase modulators through a systematic structure–activity relationship (SAR) study on quinazoline derivatives. In particular, compound JZ-4109 ( 103 , Figure 24) was able to significantly increase GCase protein abundance and GCase activity in homozygous N370S- mutant fibroblast cells from a type 1 GD patient (about 2-fold at 2 µ M) [ 89 ]. Even more interestingly, the authors characterized (by native mass spectrometry and X-ray crystallography) an allosteric binding site for these modulators by conducting a covalent modification of a lysine residue close to a properly modified ligand. Through transmission electron microscopy (TEM) experiments, they also provided insight into the mechanism of action of 103 , suggesting that GCase stabilization is due to the ability of the ligand to induce GCase dimerization [90]. A further confirmation of the role played by dimerization in GCase activation was recently provided by Rodríguez Sarmiento and coworkers. Indeed, the authors observed through analytical ultracentrifugation (AUC) that GCase dimerization was induced by the pyrrolo[2,3-b]pyrazine 104 (Figure 24), identified by testing on a cellular assay 400 diverse heterocyclic compounds, selected according to the literature and filtered by molecular properties. The GCase activator that emerged from this study did not bind to the GCase catalytic site, but to a new pocket at a dimer interface, as supported by X-ray and surface plasmon resonance (SPR) competition experiments. These results gave important mechanistic insight on the field of GCase activation, paving the way to the development of a new generation of GCase activators with CNS drug-like properties, for the treatment of Gaucher and Parkinson’s disease [91].
Pharmaceuticals 2022,15, 823 19 of 26 Other examples of allosteric GCase binders were provided by García Collazo et al. The authors reported an extensive biological screening of non-carbohydrate-derived compounds that were allosteric binders of mutated GCase. Chaperone assays on mutated homozygous L444P human fibroblasts showed moderate enhancements in the 6–50 µ M concentration range. Among all compounds tested, the better enhancements (>2-fold) were observed for the synthetic compounds 105 – 108 and the commercially available derivative 109 (Figure 25) [92]. Pharmaceuticals 2022, 15, x FOR PEER REVIEW 19 of 26 GCase catalytic site, but to a new pocket at a dimer interface, as supported by X-ray and surface plasmon resonance (SPR) competition experiments. These results gave important mechanistic insight on the field of GCase activation, paving the way to the development of a new generation of GCase activators with CNS drug-like properties, for the treatment of Gaucher and Parkinson’s disease [92]. Other examples of allosteric GCase binders were provided by García Collazo et al. The authors reported an extensive biological screening of non-carbohydrate-derived compounds that were allosteric binders of mutated GCase. Chaperone assays on mutated homozygous L444P human fibroblasts showed moderate enhancements in the 6–50 µM concentration range. Among all compounds tested, the better enhancements (>2-fold) were observed for the synthetic compounds 105–108 and the commercially available derivative 109 (Figure 25) [93]. Figure 25. Non-carbohydrate derived GCase modulators 105–109. 4. Studies in Parkinson’s Animal Models Parkinson disease (PD) is the second most common neurodegenerative disorder affecting approximately 1% of the population over 60 and 5% over 80–85 [94]. The pathological hallmarks of PD are formation of α-synuclein (α-syn) aggregates and marked loss of dopaminergic neurons in the substantia nigra pars compacta [95]. GCase mutations were shown to be a major risk factor of developing PD: approximately 7–12% of PD patients carry GBA mutations [96], and 25% of GD patients have a first- or second-degree relative with PD [97]. In addition, it emerged that enhancing GCase, also in the absence of GD mutations, may represent a valid therapeutic strategy for sporadic forms of PD [98]. The exact mechanism through which GCase deficiency contributes to PD pathogenesis is still unclear, but it includes the accumulation of α-syn, impaired lysosomal function, and ER-associated stress. Impairment of the autophagy–lysosomal pathway plays a principal role in PD pathogenesis and in particular its effect on abnormal accumulation of α-syn with formation of oligomers and fibrils [99]. The relevant examples of GCase chaperones in PD animal models are summarized in Table 6. Several drug screenings have identified a number of candidates, including already known drugs (drug-repositioning or drug-repurposing strategy), such as ambroxol (ABX, 99, Figure 23), a drug used in the treatment of respiratory diseases, and IFG (1, Figure 2), under clinical phase trials for the treatment of Gaucher disease. The fruit fly Drosophila melanogaster shows that development of PD in carriers of GD mutations results from the presence of mutant GBA alleles. Expression of mutated GBA in Drosophila resulted in dopaminergic neuronal loss, a progressive locomotor defect, and increased levels of ER stress. In a Drosophila model, both ABX (99) and IFG (1) have been shown to Figure 25. Non-carbohydrate derived GCase modulators 105–109. 4. Studies in Parkinson’s Animal Models Parkinson disease (PD) is the second most common neurodegenerative disorder affecting approximately 1% of the population over 60 and 5% over 80–85 [ 93 ]. The pathological hallmarks of PD are formation of α -synuclein ( α -syn) aggregates and marked loss of dopaminergic neurons in the substantia nigra pars compacta [ 94 ]. GCase mutations were shown to be a major risk factor of developing PD: approximately 7–12% of PD patients carry GBA mutations [ 95 ], and 25% of GD patients have a first- or second-degree relative with PD [96]. In addition, it emerged that enhancing GCase, also in the absence of GD mutations, may represent a valid therapeutic strategy for sporadic forms of PD [ 97 ]. The exact mechanism through which GCase deficiency contributes to PD pathogenesis is still unclear, but it includes the accumulation of α -syn, impaired lysosomal function, and ER-associated stress. Impairment of the autophagy–lysosomal pathway plays a principal role in PD pathogenesis and in particular its effect on abnormal accumulation of α -syn with formation of oligomers and fibrils [ 98 ]. The relevant examples of GCase chaperones in PD animal models are summarized in Table 6. Several drug screenings have identified a number of candidates, including already known drugs (drug-repositioning or drug-repurposing strategy), such as ambroxol (ABX, 99 , Figure 23), a drug used in the treatment of respiratory diseases, and IFG ( 1 , Figure 2), under clinical phase trials for the treatment of Gaucher disease. The fruit fly Drosophila melanogaster shows that development of PD in carriers of GD mutations results from the presence of mutant GBA alleles. Expression of mutated GBA in Drosophila resulted in dopaminergic neuronal loss, a progressive locomotor defect, and increased levels of ER stress. In a Drosophila model, both ABX ( 99 ) and IFG ( 1 ) have been shown to effectively reduce ER stress and the locomotor deficit, as reported by Schapira and Horowitz and their coworkers [99,100]. Moreover, ABX ( 99 ) treatment resulted in increased brain GCase activity in a transgenic mouse model expressing the heterozygous L444P mutation in the murine GBA gene, a PD model of healthy carrier of GD (GBA-PD model) [101]. Conversely, several studies have been performed on transgenic mice overexpressing human wild-type α -synuclein (Thy1- α Syn), which reproduced key features of Parkinson’s disease in the absence of GCase mutations, including nonmotor deficits, pathological, bio-
Pharmaceuticals 2022,15, 823 20 of 26 chemical, and molecular alterations, and at older ages, alterations in nigrostriatal dopaminergic neurons, including loss of striatal dopamine (PD models) [ 101 , 102 ]. Oral treatment with ABX ( 99 ) and IFG ( 1 ) increased wild-type GCase activity in the brain of Thy1- α Syn mice, inducing a decrease of α -syn accumulation in dopaminergic neurons of the substantia nigra and improving motor and nonmotor functions. The pharmacodynamic properties of these compounds in the brain of mouse models demonstrated their ability to cross the blood–brain barrier (BBB) [ 101 , 102 ]. Moreover, Migdalska-Richards et al. also reported the ability of ABX ( 99 ) to increase brain GCase activity of 20% in the midbrain of wild-type nonhuman primates after oral chronic treatment, demonstrating, once again, that ABX ( 99 ) crosses the blood–brain barrier (BBB) [103]. Table 6. Relevant examples of GCase chaperones in animal models bearing heterozygous GBA mutations, developing PD (GBA-PD) and in PD animal models. Compound Disease Models Animal Model Effect of Chaperone Refs. Pharmaceuticals 2022, 15, x FOR PEER REVIEW 20 of 26 effectively reduce ER stress and the locomotor deficit, as reported by Schapira and Horowitz and their coworkers [100,101]. Moreover, ABX (99) treatment resulted in increased brain GCase activity in a transgenic mouse model expressing the heterozygous L444P mutation in the murine GBA gene, a PD model of healthy carrier of GD (GBA-PD model) [102]. Conversely, several studies have been performed on transgenic mice overexpressing human wild-type α-synuclein (Thy1-αSyn), which reproduced key features of Parkinson’s disease in the absence of GCase mutations, including nonmotor deficits, pathological, biochemical, and molecular alterations, and at older ages, alterations in nigrostriatal dopaminergic neurons, including loss of striatal dopamine (PD models) [102,103]. Oral treatment with ABX (99) and IFG (1) increased wild-type GCase activity in the brain of Thy1-αSyn mice, inducing a decrease of α-syn accumulation in dopaminergic neurons of the substantia nigra and improving motor and nonmotor functions. The pharmacodynamic properties of these compounds in the brain of mouse models demonstrated their ability to cross the blood–brain barrier (BBB) [102,103]. Moreover, Migdalska-Richards et al. also reported the ability of ABX (99) to increase brain GCase activity of 20% in the midbrain of wild-type nonhuman primates after oral chronic treatment, demonstrating, once again, that ABX (99) crosses the blood–brain barrier (BBB) [104]. Finally, Burbulla et al. [105] developed compound S-181 (110, Table 6), a quinazoline-derived modulator of GCase with good pharmacokinetic properties. Intraperitoneal single administration of S-181 into wild-type mice showed a maximal concentration of 2.9 µM in brain and a half-life of 20.7 h, with higher concentrations in brain than in plasma after 2 h. Compound S-181 (110) enhanced wild-type GCase activity in heterozygous D409V mice, a GBA-PD model, resulting in reduction of the lipid substrates and α-syn in brain. In consideration of the preliminary results concerning the ability to cross the BBB, the compounds described in Table 6 represent promising therapeutics for future development. Table 6. Relevant examples of GCase chaperones in animal models bearing heterozygous GBA mutations, developing PD (GBA-PD) and in PD animal models. Compound Disease Models Animal Model Effect of Chaperone Refs. GBA-PD Drosophila with mutant GBA (N370S and L444P) - reduce ER stress -reverse locomotor deficits [100] PD Transgenic mice overexpressing human WT α-syn -improved motor function -reduced α-syn immunoreactivity -reduced α-syn aggregates [103] GBA-PD Drosophila with mutant GBA (N370S and L444P) -reduce ER stress -reverse locomotor deficits [100,101] GBA-PD Gba1L444P/+ mice -increased GCase activity in brains [102] PD Transgenic mice overexpressing human WT α-syn -reduced α-syn levels [102] GBA-PD Drosophila with mutant GBA (N370S and L444P) - reduce ER stress - reverse locomotor deficits [99] PD Transgenic mice overexpressing human WT α-syn - improved motor function - reduced α-syn immunoreactivity - reduced α-syn aggregates [102] GBA-PD Drosophila with mutant GBA (N370S and L444P) - reduce ER stress - reverse locomotor deficits [99,100] GBA-PD Gba1L444P/+ mice - increased GCase activity in brains [101] PD Transgenic mice overexpressing human WT α-syn - reduced α-syn levels [101] Pharmaceuticals 2022, 15, x FOR PEER REVIEW 21 of 26 GBA-PD Gba1D409V/+ mice - reduced GlcCer levels in brain -reduced α-syn levels in brain [105] 5. Conclusions The human lysosomal enzyme acid-β-glucosidase (also known as glucocerebrosidase or GCase) has recently become an increasingly interesting biological target to address not only the most common form of lysosomal storage disorders (LSDs), Gaucher disease (GD), but also much more common neurological pathologies, such as Parkinson’s disease (PD). In this regard, pharmacological chaperone therapy (PCT), which employs small compounds able to bind and stabilize the misfolded lysosomal enzymes, facilitating their translocations to the lysosomes, and resulting in a net recovery of the compromised catalytic activity, has recently emerged and been placed on the market of the first PC for an LSD (e.g., Galafold, for the treatment of Fabry disease). However, there is no PC-based drug for the treatment of GD or PD, yet. Iminosugar-based glycomimetics are among the most investigated class of PC for GD. They are lysosomal GCase inhibitors that act as a template, stabilizing the native folding state of the enzyme in the endoplasmic reticulum (ER), with a consequent final counterintuitive effect of enhancing the lysosomal enzyme catalytic activity in the lysosomes. Alkylated iminosugars have great potential as PCs for the GCase enzyme. It emerged that the position and length of the alkyl chain is crucial to impart the desired activity, which is not possible to be determined a priori with docking studies, since during in vitro tests with mutated cell lines, other important factors take place, such as membrane permeability and cell viability. Overall, an octyl alkyl chain seems to represent the optimal compromise between good affinity with the enzyme active site and good cell permeability, with negligible toxicity. Iminosugars of different types were identified recently as good PCs, also towards mutated cell lines (e.g., L444P, present in neurological forms of the disease), which were quite resistant to the majority of the PCs found in the past. The in vitro enzymatic enhancement observed with iminosugar-based PCs is usually around 2-fold, which is reached with different concentration of compounds ranging from micromolar to nanomolar. However, this aspect strongly depends on compound toxicity and cell permeability, so it is difficult to predict a general trend. Nevertheless, chaperoning activity observed at nanomolar concentration is in principle better. In most of the reports, the selectivity towards GCase over other lysosomal glycosidases was also verified, which is important to avoid undesired side effects. The main limitation of the competitive inhibitor-based PCs is that for their application in vivo, careful dosage tuning is needed to overcome the inhibitory effect. For this reason, more recently, allosteric enhancers have been identified through HTS screening or drug repurposing. This review aimed to describe the efforts made by the scientific community in the last 7 years (since 2015) in order to identify new PCs for the GCase enzyme. We deem that the identification of an effective PC for GCase is of fundamental importance not only for Gaucher disease but also for other diseases related to the misfolding of this enzyme, such as Parkinson’s disease, and we are confident that the scientific community will find solutions based on this therapy to be placed on the market. Author Contributions: Conceptualization, writing, and editing, M.M.-B., F.C. (Francesca Clemente), C.M., and F.C. (Francesca Cardona). All authors have read and agreed to the published version of the manuscript. GBA-PD Gba1D409V/+ mice - reduced GlcCer levels in brain - reduced α-syn levels in brain [104] Finally, Burbulla et al. [104] developed compound S-181 (110, Table 6), a quinazolinederived modulator of GCase with good pharmacokinetic properties. Intraperitoneal single administration of S-181 into wild-type mice showed a maximal concentration of 2.9 µ M in brain and a half-life of 20.7 h, with higher concentrations in brain than in plasma after 2 h. Compound S-181 ( 110 ) enhanced wild-type GCase activity in heterozygous D409V mice, a GBA-PD model, resulting in reduction of the lipid substrates and α-syn in brain. In consideration of the preliminary results concerning the ability to cross the BBB, the compounds described in Table 6represent promising therapeutics for future development.
Pharmaceuticals 2022,15, 823 21 of 26 5. Conclusions The human lysosomal enzyme acidβ -glucosidase (also known as glucocerebrosidase or GCase) has recently become an increasingly interesting biological target to address not only the most common form of lysosomal storage disorders (LSDs), Gaucher disease (GD), but also much more common neurological pathologies, such as Parkinson’s disease (PD). In this regard, pharmacological chaperone therapy (PCT), which employs small compounds able to bind and stabilize the misfolded lysosomal enzymes, facilitating their translocations to the lysosomes, and resulting in a net recovery of the compromised catalytic activity, has recently emerged and been placed on the market of the first PC for an LSD (e.g., Galafold, for the treatment of Fabry disease). However, there is no PC-based drug for the treatment of GD or PD, yet. Iminosugar-based glycomimetics are among the most investigated class of PC for GD. They are lysosomal GCase inhibitors that act as a template, stabilizing the native folding state of the enzyme in the endoplasmic reticulum (ER), with a consequent final counterintuitive effect of enhancing the lysosomal enzyme catalytic activity in the lysosomes. Alkylated iminosugars have great potential as PCs for the GCase enzyme. It emerged that the position and length of the alkyl chain is crucial to impart the desired activity, which is not possible to be determined a priori with docking studies, since during in vitro tests with mutated cell lines, other important factors take place, such as membrane permeability and cell viability. Overall, an octyl alkyl chain seems to represent the optimal compromise between good affinity with the enzyme active site and good cell permeability, with negligible toxicity. Iminosugars of different types were identified recently as good PCs, also towards mutated cell lines (e.g., L444P, present in neurological forms of the disease), which were quite resistant to the majority of the PCs found in the past. The in vitro enzymatic enhancement observed with iminosugar-based PCs is usually around 2-fold, which is reached with different concentration of compounds ranging from micromolar to nanomolar. However, this aspect strongly depends on compound toxicity and cell permeability, so it is difficult to predict a general trend. Nevertheless, chaperoning activity observed at nanomolar concentration is in principle better. In most of the reports, the selectivity towards GCase over other lysosomal glycosidases was also verified, which is important to avoid undesired side effects. The main limitation of the competitive inhibitor-based PCs is that for their application in vivo , careful dosage tuning is needed to overcome the inhibitory effect. For this reason, more recently, allosteric enhancers have been identified through HTS screening or drug repurposing. This review aimed to describe the efforts made by the scientific community in the last 7 years (since 2015) in order to identify new PCs for the GCase enzyme. We deem that the identification of an effective PC for GCase is of fundamental importance not only for Gaucher disease but also for other diseases related to the misfolding of this enzyme, such as Parkinson’s disease, and we are confident that the scientific community will find solutions based on this therapy to be placed on the market. Author Contributions: Conceptualization, writing, and editing, M.M.-B., F.C. (Francesca Clemente), C.M. and F.C. (Francesca Cardona). All authors have read and agreed to the published version of the manuscript. Funding: This research was funded by Universitàdi Firenze and Fondazione CR Firenze (“Bando congiunto per il finanziamento di progetti competitivi sulle malattie neurodegenerative 2018”— project: A multidisciplinary approach to target Parkinson’s disease in Gaucher related population, acronym MuTaParGa) and Regione Toscana (Bando Salute 2018—project: Late onset lysosomal storage disorders (LSDs) in the differential diagnosis of neurodegenerative diseases: development of new diagnostic procedures and focus on potential pharmacological chaperones (PCs), acronym LysoLate) (Fellowships for Macarena Martínez-Bailén and Francesca Clemente). Institutional Review Board Statement: Not applicable. Informed Consent Statement: Not applicable.
Pharmaceuticals 2022,15, 823 22 of 26 Data Availability Statement: Data sharing not applicable. Conflicts of Interest: The authors declare no conflict of interest. References 1. Platt, F.M.; d’Azzo, A.; Davidson, B.L.; Neufeld, E.F.; Tifft, C.J. Lysosomal storage diseases. Nat. Rev. Dis. Primers 2018 ,4, 27. [CrossRef] [PubMed] 2. Marques, A.R.A.; Saftig, P. Lysosomal storage disorders—Challenges, concepts and avenues for therapy: Beyond rare diseases. J. Cell Sci. 2019,132, jcs221739. [CrossRef] [PubMed] 3. Boyd, R.E.; Lee, G.; Rybczynski, P.; Benjamin, E.R.; Khanna, R.; Wustman, B.A.; Valenzano, K.J. Pharmacological Chaperones as Therapeutics for Lysosomal Storage Diseases. J. Med. Chem. 2013,56, 2705–2725. [CrossRef] [PubMed] 4. Pereira, D.M.; Valentão, P.; Andrade, P.B. Tuning protein folding in lysosomal storage diseases: The chemistry behind pharmacological chaperones. Chem. Sci. 2018,9, 1740–1752. [CrossRef] 5. Grabowski, G.A. Advances in Gaucher Disease: Basic and Clinical Perspectives; Future Medicine Ltd.: London, UK, 2013. 6. Sidransky, E.; Nalls, M.A.; Aasly, J.O.; Aharon-Peretz, J.; Annesi, G.; Barbosa, E.R.; Bar-Shira, A.; Berg, D.; Bras, J.; Brice, A.; et al. Multicenter Analysis of Glucocerebrosidase Mutations in Parkinson’s Disease. N. Engl. J. Med. 2009,361, 1651–1661. [CrossRef] [PubMed] 7. Alcalay, R.N.; Levy, O.A.; Waters, C.C.; Fahn, S.; Ford, B.; Kuo, S.-H.; Mazzoni, P.; Pauciulo, M.W.; Nichols, W.C.; Gan-Or, Z.; et al . Glucocerebrosidase activity in Parkinson’s disease with and without GBA mutations. Brain 2015 ,138, 2648–2658. [CrossRef] [PubMed] 8. Blanz, J.; Saftig, P. Parkinson’s disease: Acid-glucocerebrosidase activity and alpha-synuclein clearance. J. Neurochem. 2016 ,139 (Suppl. 1), 198–215. [CrossRef] [PubMed] 9. Li, H.; Ham, A.; Ma, T.C.; Kuo, S.-H.; Kanter, E.; Kim, D.; Ko, H.S.; Quan, Y.; Sardi, S.P.; Li, A.; et al. Mitochondrial dysfunction and mitophagy defect triggered by heterozygous GBA mutations. Autophagy 2019,15, 113–130. [CrossRef] [PubMed] 10. Yu, Z.; Sawkar, A.R.; Kelly, J.W. Pharmacologic chaperoning as a strategy to treat Gaucher disease. FEBS J. 2007,274, 4944–4950. [CrossRef] [PubMed] 11. Parenti, G. Treating lysosomal storage diseases with pharmacological chaperones: From concept to clinics. EMBO Mol. Med. 2009 , 1, 268–279. [CrossRef] [PubMed] 12. Benito, J.M.; García Fernández, J.M.; Ortiz Mellet, C. Pharmacological chaperone therapy for Gaucher disease: A patent review. Expert Opin. Ther. Pat. 2011,21, 885–903. [CrossRef] 13. Trapero, A.; Llebaria, A. Glucocerebrosidase inhibitors for the treatment of Gaucher disease. Future Med. Chem. 2013 ,5, 573–590. [CrossRef] [PubMed] 14. Parenti, G.; Pignata, C.; Vajro, P.; Salerno, M. New strategies for the treatment of lysosomal storage diseases (Review). Int. J. Mol. Med. 2013,31, 11–20. [CrossRef] [PubMed] 15. Aymami, J.; Barril, X.; Rodríguez-Pascau, L.; Martinell, M. Pharmacological chaperones for enzyme enhancement therapy in genetic diseases. Pharm. Pat. Anal. 2013,2, 109–124. [CrossRef] [PubMed] 16. Parenti, G.; Moracci, M.; Fecarotta, S.; Andria, G. Pharmacological chaperone therapy for lysosomal storage diseases. Future Med. Chem. 2014,6, 1031–1045. [CrossRef] 17. Sánchez-Fernández, E.M.; García Fernández, J.M.; Ortiz Mellet, C. Glycomimetic-based pharmacological chaperones for lysosomal storage disorders: Lessons from Gaucher, G M1 -gangliosidosis and Fabry diseases. Chem. Commun. 2016 ,52, 5497–5515. [CrossRef] 18. Tran, M.L.; Génisson, Y.; Ballereau, S.; Dehoux, C. Second-Generation Pharmacological Chaperones: Beyond Inhibitors. Molecules 2020,25, 3145. [CrossRef] [PubMed] 19. Liguori, L.; Monticelli, M.; Allocca, M.; Hay Mele, B.; Lukas, J.; Cubellis, M.V.; Andreotti, G. Pharmacological Chaperones: A Therapeutic Approach for Diseases Caused by Destabilizing Missense Mutations. Int. J. Mol. Sci. 2020 ,21, 489. [CrossRef] [PubMed] 20. Chiti, F.; Kelly, J.W. Small molecule protein binding to correct cellular folding or stabilize the native state against misfolding and aggregation. Curr. Opin. Struct. Biol. 2022,72, 267–278. [CrossRef] 21. Compain, P.; Martin, O.R. Iminosugars: From Synthesis to Therapeutic Applications; Wiley VCH: New York, NY, USA, 2007. 22. Kuriyama, C.; Kamiyama, O.; Ikeda, K.; Sanae, F.; Kato, A.; Adachi, I.; Imahori, T.; Takahata, H.; Okamoto, T.; Asano, N. In vitro inhibition of glycogen-degrading enzymes and glycosidases by six-membered sugar mimics and their evaluation in cell cultures. Bioorg. Med. Chem. 2008,16, 7330–7336. [CrossRef] 23. Chang, H.-H.; Asano, N.; Ishii, S.; Ichikawa, Y.; Fan, J.-Q. Hydrophilic iminosugar active-site-specific chaperones increase residual glucocerebrosidase activity in fibroblasts from Gaucher patients. FEBS J. 2006,273, 4082–4092. [CrossRef] [PubMed] 24. Zhu, X.; Sheth, K.A.; Li, S.; Chang, H.-H.; Fan, J.-Q. Rational Design and Synthesis of Highly Potent β -Glucocerebrosidase Inhibitors. Angew. Chem. Int. Ed. 2005,44, 7450–7453. [CrossRef] [PubMed] 25. Fan, J.-Q.; Zhu, X.; Sheth, K. Hydroxy Piperidine Derivatives to Treat Gaucher Disease. U.S. Patent 7,741,340, 22 June 2010. 26. Compain, P.; Martin, O.R.; Boucheron, C.; Godin, G.; Yu, L.; Ikeda, K.; Asano, N. Design and Synthesis of Highly Potent and Selective Pharmacological Chaperones for the Treatment of Gaucher’s disease. ChemBiochem 2006,7, 1356–1359. [CrossRef]
Pharmaceuticals 2022,15, 823 23 of 26 27. Sawkar, A.R.; Cheng, W.-C.; Beutler, E.; Wong, C.-H.; Balch, W.E.; Kelly, J.W. Chemical chaperones increase the cellular activity of N370S β-glucosidase: A therapeutic strategy for Gaucher disease. Proc. Natl. Acad. Sci. USA 2002,99, 15428–15433. [CrossRef] 28. Brumshtein, B.; Greenblatt, H.M.; Butters, T.D.; Shaaltiel, Y.; Aviezer, D.; Silman, I.; Futerman, A.H.; Sussman, J.L. Crystal Structures of Complexes of N-Butyl- and N-Nonyl-Deoxynojirimycin Bound to Acid β -Glucosidase: Insights into the mechanism of chemical chaperone action in Gaucher disease. J. Biol. Chem. 2007,282, 29052–29058. [CrossRef] [PubMed] 29. Parmeggiani, C.; Catarzi, S.; Matassini, C.; D’Adamio, G.; Morrone, A.; Goti, A.; Paoli, P.; Cardona, F. Human Acid β -Glucosidase Inhibition by Carbohydrate Derived Iminosugars: Towards New Pharmacological Chaperones for Gaucher Disease. ChemBiochem 2015,16, 2054–2064. [CrossRef] [PubMed] 30. Luan, Z.; Higaki, K.; Aguilar-Moncayo, M.; Ninomiya, H.; Ohno, K.; García-Moreno, M.I.; Ortiz Mellet, C.; García Fernández, J.M. ; Suzuki, Y. Chaperone Activity of Bicyclic Nojirimycin Analogues for Gaucher Mutations in Comparison with N-(n-nonyl)- Deoxynojirimycin. ChemBiochem 2009,10, 2780–2792. [CrossRef] [PubMed] 31. Mena-Barragán, T.; Narita, A.; Matias, D.; Tiscornia, G.; Nanba, E.; Ohno, K.; Suzuki, Y.; Higaki, K.; Garcia Fernández, J.M.; Ortiz Mellet, C. pH-Responsive Pharmacological Chaperones for Rescuing Mutant Glycosidases. Angew. Chem. Int. Ed. 2015 , 54, 11696–11700. [CrossRef] 32. ClinicalTrials.gov. Available online: https://clinicaltrials.gov/ct2/show/NCT03950050 (accessed on 13 May 2022). 33. Sevšek, A.; Šrot, L.; Rihter, J.; ˇ Celan, M.; van Ufford, L.Q.; Moret, E.E.; Martin, N.I.; Pieters, R.J. N-Guanidino Derivatives of 1,5-Dideoxy-1,5-imino-D-xylitol are Potent, Selective, and Stable Inhibitors of β -Glucocerebrosidase. ChemMedChem 2017 , 12, 483–486. [CrossRef] 34. Baudoin-Dehoux, C.; Castellan, T.; Rodriguez, F.; Rives, A.; Stauffert, F.; Garcia, V.; Levade, T.; Compain, P.; Génisson, Y. Selective Targeting of the Interconversion between Glucosylceramide and Ceramide by Scaffold Tailoring of Iminosugar Inhibitors. Molecules 2019,24, 354. [CrossRef] [PubMed] 35. Clemente, F.; Matassini, C.; Goti, A.; Morrone, A.; Paoli, P.; Cardona, F. Stereoselective Synthesis of C-2 Alkylated Trihydroxypiperidines: Novel Pharmacological Chaperones for Gaucher Disease. ACS Med. Chem. Lett. 2019 ,10, 621–626. [CrossRef] [PubMed] 36. Clemente, F.; Matassini, C.; Faggi, C.; Giachetti, S.; Cresti, C.; Morrone, A.; Paoli, P.; Goti, A.; Martínez-Bailén, M.; Cardona, F. Glucocerebrosidase (GCase) activity modulation by 2-alkyl trihydroxypiperidines: Inhibition and pharmacological chaperoning. Bioorg. Chem. 2020,98, 103740. [CrossRef] 37. Suzuki, K.; Nakahara, T.; Kanie, O. 3,4-Dihydroxypyrrolidine as Glycosidase Inhibitor. Curr. Top. Med. Chem. 2009 ,9, 34–57. [CrossRef] 38. Kato, A.; Nakagome, I.; Sato, K.; Yamamoto, A.; Adachi, I.; Nash, R.J.; Fleet, G.W.; Natori, Y.; Watanabe, Y.; Imahori, T.; et al. Docking study and biological evaluation of pyrrolidine-based iminosugars as pharmacological chaperones for Gaucher disease. Org. Biomol. Chem. 2016,14, 1039–1048. [CrossRef] 39. Stocker, B.L.; Dangerfield, E.M.; Win-Mason, A.L.; Haslett, G.W.; Timmer, M.S.M. Recent Developments in the Synthesis of Pyrrolidine-Containing Iminosugars. Eur. J. Org. Chem. 2010,2010, 1615–1637. [CrossRef] 40. Castellan, T.; Garcia, V.; Rodriguez, F.; Fabing, I.; Shchukin, Y.; Tran, M.L.; Ballereau, S.; Levade, T.; Génisson, Y.; Dehoux, C. Concise asymmetric synthesis of new enantiomeric C-alkyl pyrrolidines acting as pharmacological chaperones against Gaucher disease. Org. Biomol. Chem. 2020,18, 7852–7861. [CrossRef] 41. Theorell, H.; Yonetani, T. Studies on Liver Alcohol Dehydrogenase Complexes. IV. Spectrophotometric Observations on the Enzyme Complexes. Arch. Biochem. Biophys. 1964,106, 252–258. [CrossRef] 42. Diot, J.D.; Garcia Moreno, I.; Twigg, G.; Ortiz Mellet, C.; Haupt, K.; Butters, T.D.; Kovensky, J.; Gouin, S.G. Amphiphilic 1-Deoxynojirimycin Derivatives through Click Strategies for Chemical Chaperoning in N370S Gaucher Cells. J. Org. Chem. 2011 , 76, 7757–7768. [CrossRef] 43. Martínez-Bailén, M.; Carmona, A.T.; Patterson-Orazem, A.C.; Lieberman, R.L.; Ide, D.; Kubo, M.; Kato, A.; Robina, I.; Moreno- Vargas, A.J. Exploring substituent diversity on pyrrolidine-aryltriazole iminosugars: Structural basis of β -glucocerebrosidase inhibition. Bioorg. Chem. 2019,86, 652–664. [CrossRef] 44. Kato, A.; Nakagome, I.; Nakagawa, S.; Koike, Y.; Nash, R.J.; Adachi, I.; Hirono, S. Docking and SAR studies of calystegines: Binding orientation and influence on pharmacological chaperone effects for Gaucher’s disease. Bioorg. Med. Chem. 2014 , 22, 2435–2441. [CrossRef] 45. García-Moreno, M.I.; de la Mata, M.; Sánchez-Fernández, E.M.; Benito, J.M.; Díaz-Quintana, A.; Fustero, S.; Nanba, E.; Higaki, K.; Sánchez-Alcázar, J.A.; García Fernández, J.M.; et al. Fluorinated Chaperoneβ -Cyclodextrin Formulations for β - Glucocerebrosidase Activity Enhancement in Neuronopathic Gaucher Disease. J. Med. Chem. 2017 ,60, 1829–1842. [CrossRef] [PubMed] 46. Gillis, E.P.; Eastman, K.J.; Hill, M.D.; Donnelly, D.J.; Meanwell, N.A. Applications of Fluorine in Medicinal Chemistry. J. Med. Chem. 2015,58, 8315–8359. [CrossRef] 47. Bassetto, M.; Ferla, S.; Pertusati, F. Polyfluorinated groups in medicinal chemistry. Future Med. Chem. 2015 ,7, 527–546. [CrossRef] [PubMed] 48. Palchevskyy, S.S.; Posokhov, Y.O.; Olivier, B.; Popot, J.-L.; Pucci, B.; Ladokhin, A.S. Chaperoning of Insertion of Membrane Proteins into Lipid Bilayers by Hemifluorinated Surfactants: Application to Diphtheria Toxin. Biochemistry 2006 ,45, 2629–2635. [CrossRef]
Pharmaceuticals 2022,15, 823 24 of 26 49. Robertson, J.; Stevens, K. Pyrrolizidine alkaloids: Occurrence, biology, and chemical synthesis. Nat. Prod. Rep. 2017 ,34, 62–89. [CrossRef] 50. Mena-Barragán, T.; García-Moreno, M.I.; Nanba, E.; Higaki, K.; Concia, A.L.; Clapés, P.; García Fernández, J.M.; Ortiz Mellet, C. Inhibitor versus chaperone behaviour of D-fagomine, DAB and LAB sp 2 -iminosugar conjugates against glycosidases: A structureactivity relationship study in Gaucher fibroblasts. Eur. J. Med. Chem. 2016,121, 880–891. [CrossRef] 51. Mena-Barragán, T.; García-Moreno, M.I.; Sevšek, A.; Okazaki, T.; Nanba, E.; Higaki, K.; Martin, N.I.; Pieters, R.J.; García Fernández, J.M.; Ortiz Mellet, C. Probing the Inhibitor versus Chaperone Properties of sp 2 -Iminosugars towards Human β-Glucocerebrosidase: A Picomolar Chaperone for Gaucher Disease. Molecules 2018,23, 927. [CrossRef] 52. Sevšek, A.; ˇ Celan, M.; Erjavec, B.; Quarles van Ufford, L.; Sastre Toraño, J.; Moret, E.E.; Pieters, R.J.; Martin, N.I. Bicyclic isoureas derived from 1-deoxynojirimycin are potent inhibitors of β -glucocerebrosidase. Org. Biomol. Chem. 2016 ,14, 8670–8673. [CrossRef] 53. Rodríguez-Lavado, J.; de la Mata, M.; Jiménez-Blanco, J.L.; García-Moreno, M.I.; Benito, J.M.; Díaz-Quintana, A.; Sánchez-Alcázar, J.A. ; Higaki, K.; Nanba, E.; Ohno, K.; et al. Targeted delivery of pharmacological chaperones for Gaucher disease to macrophages by a mannosylated cyclodextrin carrier. Org. Biomol. Chem. 2014,12, 2289–2301. [CrossRef] 54. Compain, P.; Bodlenner, A. The Multivalent Effect in Glycosidase Inhibition: A New, Rapidly Emerging Topic in Glycoscience. ChemBiochem 2014,15, 1239–1251. [CrossRef] 55. Gouin, S.G. Multivalent Inhibitors for Carbohydrate-Processing Enzymes: Beyond the “Lock-and-Key” Concept. Chem. Eur. J. 2014,20, 11616–11628. [CrossRef] 56. Zelli, R.; Longevial, J.-F.; Dumy, P.; Marra, A. Synthesis and biological properties of multivalent iminosugars. New J. Chem. 2015 , 39, 5050–5074. [CrossRef] 57. Matassini, C.; Parmeggiani, C.; Cardona, F.; Goti, A. Are enzymes sensitive to the multivalent effect? Emerging evidence with glycosidases. Tetrahedron Lett. 2016,57, 5407–5415. [CrossRef] 58. Compain, P. Multivalent Effect in Glycosidase Inhibition: The End of the Beginning. Chem. Rec. 2020,20, 10–22. [CrossRef] 59. González-Cuesta, M.; Ortiz Mellet, C.; García Fernández, J.M. Carbohydrate supramolecular chemistry: Beyond the multivalent effect. Chem. Commun. 2020,56, 5207–5222. [CrossRef] 60. Della Sala, P.; Vanni, C.; Talotta, C.; Di Marino, L.; Matassini, C.; Goti, A.; Neri, P.; Šesták, S.; Cardona, F.; Gaeta, C. Multivalent resorcinarene clusters decorated with DAB-1 inhitopes: Targeting Golgi α -mannosidase from Drosoph.Melanogaster Org. Chem. Front. 2021,8, 6648–6656. [CrossRef] 61. Vanni, C.; Bodlenner, A.; Marradi, M.; Schneider, J.P.; Ramirez, M.d.l.A.; Moya, S.; Goti, A.; Cardona, F.; Compain, P.; Matassini, C. Hybrid Multivalent Jack Bean α -Mannosidase Inhibitors: The First Example of Gold Nanoparticles Decorated with Deoxynojirimycin Inhitopes. Molecules 2021,26, 5864. [CrossRef] 62. Alvarez-Dorta, D.; King, D.T.; Legigan, T.; Ide, D.; Adachi, I.; Deniaud, D.; Désiré, J.; Kato, A.; Vocadlo, D.; Gouin, S.G.; et al. Multivalency To Inhibit and Discriminate Hexosaminidases. Chem. Eur. J. 2017,23, 9022–9025. [CrossRef] 63. Matassini, C.; Vanni, C.; Goti, A.; Morrone, A.; Marradi, M.; Cardona, F. Multimerization of DAB-1 onto Au GNPs affords new potent and selective N-acetylgalactosamine-6-sulfatase (GALNS) inhibitors. Org. Biomol. Chem. 2018,16, 8604–8612. [CrossRef] 64. D’Adamio, G.; Matassini, C.; Parmeggiani, C.; Catarzi, S.; Morrone, A.; Goti, A.; Paoli, P.; Cardona, F. Evidence for a multivalent effect in inhibition of sulfatases involved in lysosomal storage disorders (LSDs). RSC Adv. 2016,6, 64847–64851. [CrossRef] 65. Martínez-Bailén, M.; Carmona, A.T.; Cardona, F.; Matassini, C.; Goti, A.; Kubo, M.; Kato, A.; Robina, I.; Moreno-Vargas, A.J. Synthesis of multimeric pyrrolidine iminosugar inhibitors of human β -glucocerebrosidase and α -galactosidase A: First example of a multivalent enzyme activity enhancer for Fabry disease. Eur. J. Med. Chem. 2020,192, 112173. [CrossRef] 66. Decroocq, C.; Rodríguez-Lucena, D.; Ikeda, K.; Asano, N.; Compain, P. Cyclodextrin-Based Iminosugar Click Clusters: The First Examples of Multivalent Pharmacological Chaperones for the Treatment of Lysosomal Storage Disorders. ChemBiochem 2012 , 13, 661–664. [CrossRef] 67. Joosten, A.; Decroocq, C.; de Sousa, J.; Schneider, J.P.; Etamé, E.; Bodlenner, A.; Butters, T.D.; Compain, P. A Systematic Investigation of Iminosugar Click Clusters as Pharmacological Chaperones for the Treatment of Gaucher Disease. ChemBiochem 2014,15, 309–319. [CrossRef] 68. Laigre, E.; Hazelard, D.; Casas, J.; Serra-Vinardell, J.; Michelakakis, H.; Mavridou, I.; Aerts, J.M.F.G.; Delgado, A.; Compain, P. Investigation of original multivalent iminosugars as pharmacological chaperones for the treatment of Gaucher disease. Carbohydr. Res. 2016,429, 98–104. [CrossRef] 69. Jing, X.; Yu, F.; Chen, L. Visualization of nitroxyl (HNO) in vivo via a lysosome-targetable near-infrared fluorescent probe. Chem. Commun. 2014,50, 14253–14256. [CrossRef] 70. Stauffert, F.; Serra-Vinardell, J.; Gómez-Grau, M.; Michelakakis, H.; Mavridou, I.; Grinberg, D.; Vilageliu, L.; Casas, J.; Bodlenner, A. ; Delgado, A.; et al. Stereodivergent synthesis of right- and left-handed iminoxylitol heterodimers and monomers. Study of their impact on β-glucocerebrosidase activity. Org. Biomol. Chem. 2017,15, 3681–3705. [CrossRef] 71. Vanni, C.; Clemente, F.; Paoli, P.; Morrone, A.; Matassini, C.; Goti, A.; Cardona, F. 3,4,5-Trihydroxypiperidine Based Multivalent Glucocerebrosidase (GCase) Enhancers. ChemBiochem 2022,23, e202200077. [CrossRef] 72. Castilla, J.; Rísquez, R.; Higaki, K.; Nanba, E.; Ohno, K.; Suzuki, Y.; Díaz, Y.; Ortiz Mellet, C.; García Fernández, J.M.; Castillón, S . Conformationally-locked N-glycosides: Exploiting long-range non-glycone interactions in the design of pharmacological chaperones for Gaucher disease. Eur. J. Med. Chem. 2015,90, 258–266. [CrossRef]
Pharmaceuticals 2022,15, 823 25 of 26 73. Castilla, J.; Rísquez, R.; Cruz, D.; Higaki, K.; Nanba, E.; Ohno, K.; Suzuki, Y.; Díaz, Y.; Ortiz Mellet, C.; García Fernández, J.M.; et al. Conformationally-Locked N-Glycosides with Selective β -Glucosidase Inhibitory Activity: Identification of a New Non- Iminosugar-Type Pharmacological Chaperone for Gaucher Disease. J. Med. Chem. 2012,55, 6857–6865. [CrossRef] 74. Whitworth, G.E.; Macauley, M.S.; Stubbs, K.A.; Dennis, R.J.; Taylor, E.J.; Davies, G.J.; Greig, I.R.; Vocadlo, D.J. Analysis of PUGNAc and NAG-thiazoline as Transition State Analogues for Human O-GlcNAcase: Mechanistic and Structural Insights into Inhibitor Selectivity and Transition State Poise. J. Am. Chem. Soc. 2007,129, 635–644. [CrossRef] 75. Navo, C.D.; Corzana, F.; Sánchez-Fernández, E.M.; Busto, J.H.; Avenoza, A.; Zurbano, M.M.; Nanba, E.; Higaki, K.; Ortiz Mellet, C. ; García Fernández, J.M.; et al. Conformationally-locked C-glycosides: Tuning aglycone interactions for optimal chaperone behaviour in Gaucher fibroblasts. Org. Biomol. Chem. 2016,14, 1473–1484. [CrossRef] 76. Aydillo, C.; Navo, C.D.; Busto, J.H.; Corzana, F.; Zurbano, M.M.; Avenoza, A.; Peregrina, J.M. A Double Diastereoselective Michael-Type Addition as an Entry to Conformationally Restricted Tn Antigen Mimics. J. Org. Chem. 2013 ,78, 10968–10977. [CrossRef] 77. Ben Bdira, F.; Kallemeijn, W.W.; Oussoren, S.V.; Scheij, S.; Bleijlevens, B.; Florea, B.I.; van Roomen, C.P.A.A.; Ottenhoff, R.; van Kooten, M.J.F.M.; Walvoort, M.T.C.; et al. Stabilization of Glucocerebrosidase by Active Site Occupancy. ACS Chem. Biol. 2017 , 12, 1830–1841. [CrossRef] 78. Maegawa, G.H.B.; Tropak, M.B.; Buttner, J.D.; Rigat, B.A.; Fuller, M.; Pandit, D.; Tang, L.; Kornhaber, G.J.; Hamuro, Y.; Clarke, J.T.R.; et al. Identification and Characterization of Ambroxol as an Enzyme Enhancement Agent for Gaucher Disease. J. Biol. Chem. 2009,284, 23502–23516. [CrossRef] 79. Chen, Y.; Sam, R.; Sharma, P.; Chen, L.; Do, J.; Sidransky, E. Glucocerebrosidase as a therapeutic target for Parkinson’s disease. Expert Opin. Ther. Targets 2020,24, 287–294. [CrossRef] 80. Bendikov-Bar, I.; Maor, G.; Filocamo, M.; Horowitz, M. Ambroxol as a pharmacological chaperone for mutant glucocerebrosidase. Blood Cells Mol. Dis. 2013,50, 141–145. [CrossRef] 81. Luan, Z.; Li, L.; Higaki, K.; Nanba, E.; Suzuki, Y.; Ohno, K. The chaperone activity and toxicity of ambroxol on Gaucher cells and normal mice. Brain Dev. 2013,35, 317–322. [CrossRef] 82. Zimran, A.; Altarescu, G.; Elstein, D. Pilot study using ambroxol as a pharmacological chaperone in type 1 Gaucher disease. Blood Cells Mol. Dis. 2013,50, 134–137. [CrossRef] 83. Silveira, C.R.A.; MacKinley, J.; Coleman, K.; Li, Z.; Finger, E.; Bartha, R.; Morrow, S.A.; Wells, J.; Borrie, M.; Tirona, R.G.; et al. Ambroxol as a novel disease-modifying treatment for Parkinson’s disease dementia: Protocol for a single-centre, randomized, double-blind, placebo-controlled trial. BMC Neurol. 2019,19, 20. [CrossRef] 84. Mullin, S.; Smith, L.; Lee, K.; D’Souza, G.; Woodgate, P.; Elflein, J.; Hällqvist, J.; Toffoli, M.; Streeter, A.; Hosking, J.; et al. Ambroxol for the Treatment of Patients With Parkinson Disease With and Without Glucocerebrosidase Gene Mutations: A Nonrandomized, Noncontrolled Trial. JAMA Neurol. 2020,77, 427–434. [CrossRef] 85. Han, T.-U.; Sam, R.; Sidransky, E. Small Molecule Chaperones for the Treatment of Gaucher Disease and GBA1-Associated Parkinson Disease. Front. Cell Dev. Biol. 2020,8, 271. [CrossRef] [PubMed] 86. Goldin, E.; Zheng, W.; Motabar, O.; Southall, N.; Choi, J.H.; Marugan, J.; Austin, C.P.; Sidransky, E. High Throughput Screening for Small Molecule Therapy for Gaucher Disease Using Patient Tissue as the Source of Mutant Glucocerebrosidase. PLoS ONE 2012,7, e29861. [CrossRef] [PubMed] 87. Aflaki, E.; Borger, D.K.; Moaven, N.; Stubblefield, B.K.; Rogers, S.A.; Patnaik, S.; Schoenen, F.J.; Westbroek, W.; Zheng, W.; Sullivan, P.; et al. A New Glucocerebrosidase Chaperone Reduces α -Synuclein and Glycolipid Levels in iPSC-Derived Dopaminergic Neurons from Patients with Gaucher Disease and Parkinsonism. J. Neurosci. 2016,36, 7441–7452. [CrossRef] [PubMed] 88. Sun, Y.; Wang, Z. CNS-Accessible Pharmacological Chaperones for Treatment of Acid Beta-Glucosidase-Related Disease States. U.S. Patent 10,588,888, 17 March 2020. 89. Zheng, J.; Chen, L.; Skinner, O.S.; Ysselstein, D.; Remis, J.; Lansbury, P.; Skerlj, R.; Mrosek, M.; Heunisch, U.; Krapp, S.; et al. β -Glucocerebrosidase Modulators Promote Dimerization of β -Glucocerebrosidase and Reveal an Allosteric Binding Site. J. Am. Chem. Soc. 2018,140, 5914–5924. [CrossRef] 90. Gruschus, J.M.; Jiang, Z.; Yap, T.L.; Hill, S.A.; Grishaev, A.; Piszczek, G.; Sidransky, E.; Lee, J.C. Dissociation of glucocerebrosidase dimer in solution by its co-factor, saposin C. Biochem. Biophys. Res. Commun. 2015,457, 561–566. [CrossRef] 91. Benz, J.; Rufer, A.C.; Huber, S.; Ehler, A.; Hug, M.; Topp, A.; Guba, W.; Hofmann, E.C.; Jagasia, R.; Rodríguez Sarmiento, R.M. Novel β -Glucocerebrosidase Activators That Bind to a New Pocket at a Dimer Interface and Induce Dimerization. Angew. Chem. Int. Ed. 2021,60, 5436–5442. [CrossRef] 92. García Collazo, A.M.; Barril Alonso, X.; Cubero Jordà, E.; Revés Vilaplana, M.; Roberts, R.S. Heteroaryl Compounds and Their Use. WO Patent 2018122775, 5 July 2018. 93. de Lau, L.M.L.; Breteler, M.M.B. Epidemiology of Parkinson’s disease. Lancet Neurol. 2006,5, 525–535. [CrossRef] 94. Kalia, L.V.; Lang, A.E. Parkinson’s disease. Lancet 2015,386, 896–912. [CrossRef] 95. García-Sanz, P.; Aerts, J.M.F.G.; Moratalla, R. The Role of Cholesterol in α -Synuclein and Lewy Body Pathology in GBA1 Parkinson’s Disease. Mov. Disord. 2021,36, 1070–1085. [CrossRef] [PubMed] 96. Aflaki, E.; Westbroek, W.; Sidransky, E. The Complicated Relationship between Gaucher Disease and Parkinsonism: Insights from a Rare Disease. Neuron 2017,93, 737–746. [CrossRef] [PubMed]