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Oxidative damage and response to Bacillus Calmette-Guérin in bladder cancer cells expressing sialyltransferase ST3GAL1

Severino, P,Silva, M,Carrascal, M,Malagolini, N,Chiricolo, M,Venturi, G,Barbaro Forleo, R,Astolfi, A,Catera, M,Videira, P,Dall'Olio, F

Abstract

This work was supported by: Portuguese Foundation for Science and Technology (FCT) PhD grants SFRH/BD/45120/2008 (Paulo F. Severino), SFRH/ BD/81860/2011 (Mariana Silva) and SFRH/BD/100970/2014 (Mylène Carrascal), Liga Portuguesa Contra o Cancro 2011 (Mylène A. Carrascal); Prémio Bluepharma Inovação Universidade de Coimbra and the Santander Totta/ Universidade NOVA de Lisboa prizes (Paula Videira). Grants from the University of Bologna (Fabio Dall’Olio). Mariangela Catera and Giulia Venturi are PhD students supported by grants from the University of Bologna.

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RESEARCH ARTICLE Open Access Oxida i e damage and esponse o Bacillus Calme e-Gué in in bladde cance cells exp essing sialyl ans e ase ST3GAL1 Paulo F. Se e ino 1,3† , Ma iana Sil a 1† , Mylene Ca ascal 1 , Nadia Malagolini 3 , Ma iella Chi icolo 3 , Giulia Ven u i 3 , Robe o Ba ba o Fo leo 3 , Annalisa As ol i 4 , Ma iangela Ca e a 3 , Paula A. Videi a 1,2* and Fabio Dall’Olio 3* Abs ac Backg ound: T ea men wi h Bacillus Calme e-Gué in (BCG) is he gold s anda d adju an immuno he apy o non- muscle in asi e bladde cance (NMIBC), al hough i ails in one hi d o he pa ien s. NMIBC exp esses wo umo - associa ed O-linked ca bohyd a es: he disaccha ide (Galβ1,3GalNAc) Thomsen-F ieden eich (T) an igen, and i s sialyla ed coun e pa (Siaα2,3Galβ1,3GalNAc) sialyl-T (sT), syn hesized by sialyl ans e ase ST3GAL1, whose oles in BCG esponse a e unknown. Me hods: The human bladde cance (BC) cell line HT1376 s ongly exp essing he T an igen, was e o i ally ansduced wi h he ST3GAL1 cDNA o wi h an emp y ec o , yielding he cell lines HT1376 sT and HT1376 T , ha exp ess, espec i ely, ei he he sT o he T an igens. Cells we e in i o challenged wi h BCG. Whole gene exp ession was s udied by mic oa ay echnology, cy okine sec e ion was measu ed by mul iplex immune-beads assay. Human mac ophages de i ed om blood monocy es we e challenged wi h he sec e ome o BCG-challenged BC cells. Resul s: The sec e ome om BCG-challenged HT1376 sT cells induced a s onge mac ophage sec e ion o IL-6, IL-1β, TNFαand IL-10 han ha o HT1376 T cells. T ansc ip omic analysis e ealed ha ST3GAL1 o e exp ession and T/sT eplacemen modula ed hund eds o genes. Se e al genes p ese ing genomic s abili y we e down- egula ed in HT1376 sT cells which, as a consequence, displayed inc eased sensi i i y o oxida i e damage. A e BCG challenge, he ansc ip ome o HT1376 sT cells showed highe suscep ibili y o BCG modula ion han ha o HT1376 T cells. Conclusions: High ST3GAL1 exp ession and T/sT eplacemen in BCG challenged-BC cance cells induce a s onge mac ophage esponse and al e he gene exp ession owa ds genomic ins abili y, indica ing a po en ial impac on BC biology and pa ien ’s esponse o BCG. Keywo ds: Bacillus Calme e-Gué in, Glycosyla ion, Sialyl T an igen, Sialyl ans e ase, Thomsen-F ieden eich an igen Backg ound The in a esical inocula ion wi h he Bacillus Calme e- Gué in (BCG) is he mos e ec i e adju an he apy o non-muscle in asi e bladde cance s (NMIBC) a e ansu e h al esec ion. Howe e , one hi d o he pa ien s ail o espond and expe ience ecu ence a e ea men . The easons why BCG he apy ail a e s ill unclea , al hough i is well es ablished ha he an i- umo ac i i y o BCG depends on i s abili y o elici an e ec i e local immune esponse [1–3]. Glycosyla ion, one o he mos equen pos - ansla ional modi ica ion o p o eins, unde goes p o ound changes in all ypes o cance [4], including bladde cance (BC) [5–8]. The abe an exp ession o glycoconjuga es is o en caused by he de anged egula ion o hei biosyn he ic enzymes: he glyco- syl ans e ases [9]. The Thomsen-F ieden eich (T) an igen is a disaccha ide (Galβ1,3GalNAc) O-linked o se ine o h eo- nine esidues o glycop o eins (Addi ional ile 1A), whose * Co espondence: [email p o ec ed];[email p o ec ed] † Equal con ibu o s 1 Cen o de Es udos de Doenças C ónicas, CEDOC, NOVA Medical School/ Faculdade de Ciências Médicas, Uni e sidade NOVA de Lisboa, Campo dos Má i es da Pá ia, 130, 1169-056 Lisbon, Po ugal 3 Dipa imen o di Medicina Specialis ica, Diagnos ica e Spe imen ale, Sede di Pa ologia Gene ale, Uni e si à di Bologna, Via S. Giacomo 14, 40126 Bologna, I aly Full lis o au ho in o ma ion is a ailable a he end o he a icle © The Au ho (s). 2018 Open Access This a icle is dis ibu ed unde he e ms o he C ea i e Commons A ibu ion 4.0 In e na ional License (h p://c ea i ecommons.o g/licenses/by/4.0/), which pe mi s un es ic ed use, dis ibu ion, and ep oduc ion in any medium, p o ided you gi e app op ia e c edi o he o iginal au ho (s) and he sou ce, p o ide a link o he C ea i e Commons license, and indica e i changes we e made. The C ea i e Commons Public Domain Dedica ion wai e (h p://c ea i ecommons.o g/publicdomain/ze o/1.0/) applies o he da a made a ailable in his a icle, unless o he wise s a ed. Se e ino e al. BMC Cance (2018) 18:198 h ps://doi.o g/10.1186/s12885-018-4107-1 abe an exp ession in cance has been associa ed wi h ma- lignancy [10–13] and used as a possible a ge o he apy [14–16]. I s sialyla ed coun e pa , he sialyl-T (sT) (Siaα2,3- Galβ1,3GalNAc-O-Se /Th ) s uc u e and i s main biosyn- he ic enzyme, he sialyl ans e ase ST3GAL1, a e also abe an ly exp essed in a a ie y o cance s [17,18] [ e iewed in [19,20]]. In BC, he exp ession o T/sT an igens is also abe an and i in luences in asion and immune ec- ogni ion [21–23]. In a p e ious wo k [24], we ha e shown ha he mRNA o ST3GAL1 was o e exp essed in NMIBC bu no in muscle in asi e BC o in benign bladde umo s and ST3GAL1 plays he majo ole in he sialyla ion o he T an igen in BC. The T an igen has been sugges ed as a use ul ma ke o BCG esponse [23], e en hough he ela ionship be ween ST3GAL1/sT and BCG esponse has ne e been es ablished. In his s udy, we in es iga ed he e ec s o he al e na- i e exp ession o he T o sT an igens on he abili y o BC cells o ac i a e mac ophages in esponse o BCG challenge and on he ansc ip ome o BC cells, u ilizing he HT1376 cell line in which he T an igen was eplaced by he sT an igen, by e o i al ansduc ion wi h he ST3GAL1 cDNA. This cell line was chosen because o i s low ST3GAL1 exp ession and i s high and homogenous eac i i y wi h he T an igen-speci ic lec in PNA [24]. The gene exp ession and cy okine p o iles o he cell lines exp essing ei he he T o he sT an igens a e BCG challenge and he abili y o hei sec e ome o s imula e cy okine elease by mac ophages was s udied. Me hods Gene a ion o ST3GAL1-exp essing cell lines The HT1376 cell line was es ablished om a p ima y in- asi e ansi ional cell cance o he bladde [25]. Cells we e g own in DMEM (4.5 g/L glucose, Sigma), con ain- ing 10% oe al cal se um (FCS, Sigma), 2 mM L-glu am- ine (Sigma) and 100 μg/mL penicillin/s ep omycin (Sigma). HT1376 cells exp essing ST3GAL1 we e gene - a ed by ansduc ion wi h a e o i al ec o ob ained wi h he Vi aPowe Len i i al Exp ession Sys em (In i- ogen), acco ding o manu ac u e ’s ins uc ions. The cDNA o he whole coding egion o human ST3GAL1 was ob ained by PCR ampli ica ion o he cDNA o he colon cance cell line HT29 wi h he ollowing p ime pai : o wa d p ime : 5’-CACCATGGTGACCCTGCG- GAAGAGG-3′; e e se p ime : 5’-TCATCTCCCCTT- GAAGATCCGG-3′. Ampli ica ion was pe o med o 35 cycles o he ollowing p og am: dena u a ion 94 °C 1 min; annealing 60 °C 1 min; ex ension 72 °C 1 min. The PCR p oduc was gel isola ed and cloned in o he pLen i6/V5 Di ec ional TOPO cloning ec o (In i o- gen) which d i es he exp ession o inse ed genes unde he con ol o he cy omegalo i us p omo e . A nega i e con ol e o i al ec o was p epa ed wi h an emp y plasmid. A e ansduc ion wi h nega i e con ol- o ST3GAL1-exp essing ec o s, HT1376 cells we e selec ed wi h 4 μg/mL o blas icidin. The eplacemen o he T an igen wi h he sT an igen was e alua ed as loss o cell eac i i y wi h he luo escen labeled lec in om A achis hypogea (peanu agglu inin, PNA), conjuga ed wi h luo - escein iso hiocyana e (PNA-FITC). Al hough selec ed cells we e mainly nega i e o PNA-FITC as de ec ed by FACS analysis, a small popula ion o PNA-FITC posi i e cells was s ill p esen . To ob ain a popula ion o cells homoge- neously nega i e o he T an igen, abou 100 ST3GAL1- ansduced HT1376 cells we e seeded in a 10 cm Pe i dish and a e one mon h, PNA-FITC nega i e colonies we e selec ed and pooled. This polyclonal cell popula ion homogeneously nega i e o T an igen exp ession is he e- a e e e ed o as HT1376 sT . The polyclonal cell popula- ion ob ained a e ansduc ion wi h he nega i e con ol e o i al ec o ollowed by blas icidin selec ion is e- e ed o as HT1376 T . Flow cy ome y Cells we e incuba ed wi h PNA-FITC o 30 min a 4 °C in he da k, washed and analyzed by low cy ome y. Si- alidase ea men was pe o med wi h 20 mU o Clos- idium pe ingens sialidase (Roche Diagnos ics), o 90 min a 37 °C. Real ime RT-PCR To al RNA was isola ed using he GenElu e Mammalian To al RNA Pu i ica ion ki and DNase ea men (Sigma), acco ding o he manu ac u e ’s ins uc ions. One mic og am o o al RNA was e e se ansc ibed, using he andom-p ime s based High Capaci y cDNA A chi e Ki (Applied Biosys ems). The exp ession le el o ST3GAL1 (Hs00161688_m1; NM_173344.2 and NM_003033.3) was e alua ed wi h he TaqMan assay sys em in a 7500 Fas Real-Time PCR Sys em (Applied Biosys ems) using he TaqMan Uni e sal PCR Mas e Mix Fas , as p e iously desc ibed [24,26,27]. The e i- ciency o he ampli ica ion eac ion o each p ime -p obe was abo e 95% (as de e mined by he manu ac u e ). No - malized mRNA exp ession was compu ed as he numbe o mRNA molecules o he gene o in e es pe 1000 mRNA molecules o he endogenous con ol β-ac in gene, calcula ed using he 2 -ΔCT ×1000 o mula [28]. Sialyl ans e ase ac i i y assay Cell pelle s we e homogenized in wa e and he p o ein concen a ion o he homogena es was de e mined by he Low y me hod. The ac i i y o ST3GAL1 was measu ed in he homogena es in he ange o ime and subs a e concen a ion linea i y in a 25 μL olume con- aining: 50 mM o 2-(N-mo pholino)e hanesulphonic acid (MES) bu e pH 6.5, 0.5% T i on X-100, 23.5 μgo Se e ino e al. BMC Cance (2018) 18:198 Page 2 o 9 Galβ1,3GalNAcα1-O-benzyl (benzyl-T; Sigma) as ac- cep o subs a e, 15 μM (640 Bq) o CMP-[ 14 C]Sia (Ame sham) and 50 μg o homogena e p o eins. Reac- ions we e incuba ed a 37 °C, o 2 h and he p oduc s we e hen isola ed by hyd ophobic ch oma og aphy in SepPak C18 Classic Ca idge (Wa e s). The columns we e washed wi h wa e and elu ed wi h 1 mL ace o- ni ile, which was coun ed in a liquid scin illa ion coun- e . The inco po a ion on endogenous subs a es, in he absence o he accep o subs a e, was sub ac ed. BCG challenge o HT1376 cells Comme cial Connaugh BCG (ImmuCys , Sano i Pas- eu SA, F ance) was suspended in PBS con aining 0.05% Tween 80 and s o ed a −80 °C. Be o e each assay, BCG agg ega es we e disca ded by cen i uga ion (300 × g o 5 min). To assess BCG in e naliza ion, bac- e ia we e s ained wi h 2 μg/mL o 5-(and-6-)(((4-chlo - ome hyl)benzoyl)amino) e ame hyl hodamine (CMTR, In i ogen) o 2 h in cul u e medium, incuba ed wi h HT1376 T o HT1376 sT cells in a 1:10 cell/bac e ia a io o 2 h a 37 °C and analyzed by low cy ome y. To as- sess cy okine sec e ion, HT1376 T o HT1376 sT cells we e challenged wi h uns ained BCG o 2 h a 37 °C, he medium was emo ed and he cells we e washed wice wi h PBS and incuba ed wi h esh medium o 16 h. Condi ioned media we e used o cy okine analysis and o challenge mac ophages, while cell pelle s we e used o RNA ex ac ion and ansc ip omic analysis. De e mina ion o cy okine concen a ion The concen a ion o cy okines IL-1β, IL-2, IL-4, IL-6, IL-8, IL-10, IL-12, IL-17, IFN-γand TNF-αwas mea- su ed in a 96-well s ip pla e om a comme cial MIBA ki (Bio-Rad), as ecommended by manu ac u e ’s in- s uc ions. Fluo escence was ead in a Luminex 100 Bio- Plex Liquid A ay Mul iplexing Sys em eade (Bio-Rad) and he da a analyzed wi h he Bio-Plex Manage 5 so wa e (Bio-Rad). Mac ophage p epa a ion and s imula ion Mononuclea cells we e isola ed by Ficoll-Hypaque densi y g adien cen i uga ion (GE Heal hca e) om he pe iphe al blood o heal hy blood-dono s. Fo his use, no s udy app o al was necessa y. The only au ho iza ion equi ed was ha ob ained om he Blood Collec ion Se ice o he Pizza di Hospi al in Bologna, I aly, which keeps he igh s on dono s’blood samples. Mac ophages we e ob ained by di e en ia ion o monocy es by cul u e in RPMI 1640 (Sigma) medium supplemen ed wi h 20% FCS, 2 mM L-glu amine and 100 μg/mL penicillin/ s ep omycin. A e 7 days, monocy e-de i ed mac o- phages we e de ached wi h a cell sc ape and dispensed in 24 well pla es a a cell densi y co esponding app oxima ely o 50% o con luence. One day la e , mac- ophages we e incuba ed wi h s anda d uncondi ioned cul u e medium o wi h he media condi ioned by HT1376 T o HT1376 sT cells ei he BCG-challenged (as desc ibed abo e) o mock challenged. A e 2 h, he con- di ioned media we e eplaced by esh medium, which was collec ed 24 h la e and s o ed a −80 °C o he de- ec ion o cy okines sec e ed by mac ophages. H 2 O 2 ea men Cells in exponen ial g ow h phase we e incuba ed in se um- ee medium con aining 5 mM H 2 O 2 o 1 h. The medium was hen eplaced wi h esh comple e medium and he cells we e ha es ed and analyzed 24 h la e . Mock- ea ed cells we e incuba ed as abo e wi hou H 2 O 2 . The cy o oxic e ec o H 2 O 2 was de e mined by coun ing he numbe o cells in six eplicas seeded in 6- wells pla es. Rep esen a i e ields we e pho og aphed wi h an in e ed phase con as mic oscope. Whole ansc ip ome analysis by exp ession mic oa ay To al RNA was isola ed by he guanidinium hiocyana e- me hod [29] and con e ed o labelled single s and cDNA (ssDNA) by he comme cial Whole T ansc ip Exp ession ki (Ambion), acco ding o he manu ac- u e ’s ins uc ions. Labelled ssDNA agmen s we e hy- b idized in a Human T ansc ip ome A ay 2.0 o e nigh . A e s aining wi h phycoe y h in-s ep a idin, luo es- cence was ead in a GeneChip Scanne 3000 7G (A y- me ix). A e s a is ical analysis (see below), a ay da a we e unc ionally analyzed by he A ayS a 2.0 so - wa e (DNASTAR) and h ough a li e a u e sea ch o he biological oles o modula ed genes. Gene nomencla u e ollowed he HUGO Gene Nomencla u e Commi ee ules (h ps://www.genenames.o g/) in i alic uppe case le e s. Wi h excep ion o cy okines, p o eins had he same name as he gene, ep esen ed in egula uppe case. S a is ical me hods Mic oa ay aw da a we e backg ound-sub ac ed, no - malized and summa ized wi h he obus mul i-a ay a e age (RMA) algo i hm implemen ed in he A y pack- age o Bioconduc o (www.bioconduc o .o g), which u i- lizes R so wa e. Di e en ially exp essed genes be ween que y and con ol assay we e selec ed by applica ion o he wo ail ANOVA, ollowed by he Benjamini- Hochbe g alse disco e y a e es wi h a po q≤0.05 cu -o and by he log 2 exp ession a io, conside ing only a ia ions ≥0.5. MIBA da a we e analyzed by ANOVA, ollowed by Tukey mul iple compa ison es . H 2 O 2 ox- ici y da a we e analyzed by he S uden ’s es . The so - wa e used was G aphpad P ism, e sion 7.0. Se e ino e al. BMC Cance (2018) 18:198 Page 3 o 9 Resul s ST3GAL1-exp ession leads o eplacemen o T wi h sT an igen in HT1376 cells The mock- ansduced cell line HT1376 T , like he wild ype HT1376, exp essed high and homogeneous T ex- p ession, while he ST3GAL1- ansduced cell line HT1376 sT displayed an homogeneous low PNA eac i - i y which could be e e ed o high eac i i y a e sialid- ase ea men (Addi ional ile 1B). Bo h he ST3GAL1 ac i i y (Addi ional ile 1C) and he ST3GAL1 mRNA measu ed by eal ime PCR (Addi ional ile 1D) we e e y high in HT1376 sT al hough almos unde ec able in HT1376 T . The le el o ST3GAL1 ac i i y and PNA e- ac i i y eached by HT1376 sT cells was simila o ha displayed by he wild ype BC cell line 5637 s ongly ex- p essing ST3GAL1 (da a no shown [24]). This is consis - en wi h he no ion ha , in BC cells, ST3GAL1-media ed α2,3 sialyla ion o galac ose (Addi ional ile 1A) masks he Tan igen[24]. IL-6 and IL-8 sec e ion by HT1376 T and HT1376 sT cells To assess he e ec o ST3GAL1 o e exp ession and he consequen eplacemen o he T wi h he sT an igen on cy okine p oduc ion ollowing BCG s imula ion, we challenged he wo HT1376 cell lines wi h BCG. Among he se e al cy okines es ed (IL-1β, IL-2, IL-4, IL-6, IL-8, IL-10, IL-12, IL-17, IFN-γand TNF-α), only IL-8 was de- ec able in media condi ioned by unchallenged HT1376 T o HT1376 sT cells. A e BCG challenge, IL-6 became de ec - able in bo h HT1376 sT and HT1376 T cells, while he IL-8 sec e ion showed a clea endency o up- egula ion a e BCG challenge, especially in HT1376 T cells (Fig. 1a). The p alues a e epo ed in Addi ional ile 2. To es ablish whe he he di e en IL-8 p oduc ion by HT1376 sT a e BCG challenge was due o a highe BCG up ake by hese cells, we measu ed BCG in e naliza ion by he wo HT1376 cell popula ions by low cy ome y. As shown in Fig. 1b, he e we e no signi ican di e - ences in he up ake o luo escen BCG by HT1376 T and HT1376 sT cells, uling ou he possibili y ha di e ences in cy okine p oduc ion by BCG-s imula ed HT1376 T and HT1376 sT was dependen on di e en BCG in e naliza- ion a e. HT1376 sT cells induce a s onge mac ophage sec e o y esponse a e BCG s imuli To in es iga e he ole played by ST3GAL1 exp ession and he consequen T/sT eplacemen on he s imula- ion o inna e immuni y by BCG-challenged BC cells, he sec e ion o cy okines by human mac ophages s im- ula ed wi h he sec e ome o BCG-challenged BC cells was measu ed. Uns imula ed mac ophages sec e ed high le els o IL-8 and e y low le els o TNF-α, IL-6, IL-1β and IL-10. This pa e n o sec e ion was no signi ican ly changed by s imula ion wi h he sec e ome o BCG- unchallenged HT1376 T o HT1376 sT cells (Fig. 2). In con as , he sec e ome om bo h BCG-challenged cell lines, in pa icula ha om HT1376 sT , signi ican ly in- c eased he sec e ion o IL-6, IL-1β, TNF-αand IL-10 whe eas IL-8 sec e ion was ha dly a ec ed by he sec e- ome o BCG-challenged cells, ega dless o hei ST3GAL1 exp ession (Fig. 2). I should be no ed ha he le el o sec e ion o IL-8 and IL-6 by mac ophages was abou 10 and 3- old highe , espec i ely, han he le el o ei he in HT1376 cells (Fig. 1), uling ou he possibili y o a signi ican con amina ion o cy okines se- c e ed by mac ophages wi h hose sec e ed by HT1376 cells. The cy okines IL-2, IL-4, IL-12 and IL-17 we e no sec e ed by mac ophages in any o he es ed condi ions (da a no shown). The pand q alues a e epo ed in Addi ional ile 2. HT1376 sT cells display down- egula ion o genes p ese ing genomic s abili y The impac o ST3GAL1 o e exp ession and o T e- placemen by sT on he global ansc ip ional ac i i y o HT1376 cells was e alua ed by exp ession mic oa ay echnology. O he 254 genes, which displayed ST3GAL1-dependen modula ion by a leas a log 2 ex- p ession a io ≥1.0 (meaning a old change o a leas 2) wi h po q alues ≤0.05, 106 we e up- egula ed and 148 we e down- egula ed. The comple e lis o genes BA Fig. 1 BCG-s imula ion o HT1376 cells. a: Sec e ion o IL-6 and IL-8. HT1376 T , (whi e ci cles) and HT1376 sT (black ci cles) cells we e challenged wi h BCG o 2 h, hen hey we e washed and cul u ed in medium o 16 h. Cy okine concen a ion was de e mined as desc ibed in Ma e ials and Me hods sec ion. Da a o h ee independen expe imen s a e epo ed. S a is ical analysis is epo ed in Addi ional ile 2.b:Timecou se o BCG up ake. HT1376T (whi e ci cles) and HT1376sT (black ci cles) cells we e challenged wi h CMTMR-labelled BCG o 2 and 6 h, as desc ibed in he Me hods sec ion. BCG in e naliza ion was es ima ed as mean luo escence in ensi y o he cells, measu ed by low cy ome y Da a o h ee independen expe imen s a e epo ed Se e ino e al. BMC Cance (2018) 18:198 Page 4 o 9 showing signi ican modula ion (changes equal o highe han 2- old) in HT1376 sT s. HT1376 T is epo ed in Addi ional ile 3. A leas 29 genes pu a i ely egula ing malignancy because o hei in ol emen in he con ol o apop osis, cell g ow h, angiogenesis, in lamma ion o p o eolysis, we e di e en ially exp essed in HT1376 sT cells, compa ed wi h HT1376 T cells (Addi ional ile 4). A sea ch in he li e a u e e ealed ha 18 genes we e mod- ula ed owa ds inc eased malignancy and 14 owa ds de- c eased malignancy (Addi ional ile 4). Rema kably, among he 18 genes modula ed owa ds inc eased malig- nancy in HT1376 sT cells, 11 down- egula ed genes can be collec i ely e e ed o as “ca e ake genes”because o hei in ol emen in DNA epai and mi o ic ideli y (Addi ional ile 4). Mo eo e , i h eshold was lowe ed o include genes down- egula ed abo e 1.3- old, he num- be o down- egula ed ca e ake genes ose o 34 (Table 1). As a unc ional alida ion o gene exp ession da a, cells we e exposed o he geno oxic e ec s o he oxidizing agen H 2 O 2 . As expec ed o a cell line wi h impai ed DNA epai mechanisms, H 2 O 2 - ea men Fig. 2 Cy okine sec e ion by human mac ophages ea ed wi h condi ioned media o BC cell lines. Cy okine sec e ion was measu ed in cul u e media condi ioned by uns imula ed mac ophages (MΦ, g ey ci cles) o s imula ed wi h condi ioned media om BCG- challenged o unchallenged BC cell lines: HT1376 T , (whi e ci cles); HT1376 sT (black ci cles). Cells we e challenged wi h BCG o 2 h, hen hey we e washed and allowed o condi ion he cul u e medium o 16 h. The condi ioned cul u e media o BCG-challenged o unchallenged cells was used o s imula e human monocy e-de i ed mac ophages o 24 h. MØ: cy okines eleased by uns imula ed mac ophages; MØ + unchallenged: cy okines eleased by mac ophages s imula ed wi h he condi ioned medium o unchallenged HT1376 cells; MØ + BCG- challenged: cy okines eleased om mac ophages s imula ed wi h he condi ioned medium o BCG-challenged cells. Da a o h ee independen expe imen s a e epo ed. S a is ical analysis is epo ed in Addi ional ile 2 Table 1 Genes in ol ed in main aining ch omosomal s abili y and/o DNA epai showing down- egula ion in HT1376 sT cells Genes showing a old change ≥2 a e boxed in g ay Se e ino e al. BMC Cance (2018) 18:198 Page 5 o 9 esul ed in a educed iabili y in HT1376 sT han in HT1376 T cells (Fig. 3a and b). HT1376 sT cells display inc eased ansc ip omic changes a e BCG challenging To in es iga e he e ec o a di e en ial T/sT exp ession on BCG challenging, he global ansc ip ional ac i i y was also compa ed in BCG-challenged HT1376 T and HT1376 sT cell lines. While in HT1376 sT cells a g oup o 38 genes showed signi ican modula ion by BCG (pand q alues ≤0.05) wi h a log 2 exp ession a io ≥0.5 ( old change a leas 1.4) (Addi ional in o ma ion 5), he en- dency o modula ion showed by a ew genes in HT1376 T cells ne e eached s a is ical signi icance (da a no shown). Modula ed genes in HT1376 sT cells ell in o se - e al b oad unc ional ca ego ies (Addi ional in o ma ion 5). In pa icula , a se o genes ela ed o “aminoacid and p o ein biosyn hesis”we e p e alen ly down- egula ed in BCG-challenged HT1376 sT cells (Addi ional ile 5). This unc ional ca ego y includes genes in ol ed in he biosyn- hesis and anspo o aminoacids, a achmen o aminoa- cids o RNAs and egula ion o ansla ion. O he ca ego ies o modula ed genes include “cell g ow h”and “in lamma o y and immune esponse”(Addi ional ile 5). Discussion The o e exp ession o ST3GAL1 has been widely s ud- ied in cellula models o b eas cance and ound o be esponsible o inc eased malignancy [30–32]. In con- as , e y li le is known on he ole o his enzyme in BC biology. In his wo k, we ha e pe o med an exhaus - i e analysis o a BC expe imen al sys em in which h ough he o e exp ession o ST3GAL1, he cons i u- i ely exp essed T an igen was eplaced by i s sialyla ed coun e pa , he sT ca bohyd a e s uc u e. Bo h s uc- u es a e biologically ac i e, being ecep o s ei he o galec ins o siglecs, as well as o suga binding ecep- o s o mic oo ganisms [33]. Thus, he pheno ypic changes we epo a e ST3GAL1 o e exp ession could be a ibu able ei he o he lack o T an igen o exp es- sion o sT o bo h. The modula ion o he immune e- sponse, in pa icula , he sec e ion o cy okines, is a well known unc ional consequence o BCG in e ac ion wi h BC cells [1,34,35]. Ou s udy con i ms ha BCG in- duces IL-6 and IL-8 sec e ion by BC cells and shows a endency o highe IL-8 sec e ion by BCG-s imula ed cells exp essing sT. In BC pa ien s, plasma [36] and is- sue [37] IL-6 le els a e ele a ed and associa ed wi h umo p og ession and poo p ognosis. P e ious s udies ha e indica ed ha BCG s imula es IL-6 p oduc ion in u ine o pa ien s and BC cell lines [38], inducing non apop o ic cell dea h [39]. Inc eased u ina y IL-8 le el also co ela es wi h p og ession in BC pa ien s [40], al- hough a high u ina y IL-8 le el a e BCG ins illa ion is a p ognos ic ac o o success ul ou come [41,42]. Ou da a indica e ha a e BCG challenge, only he sec e- ion o IL-6 and, o a lesse ex en , IL-8 we e s imula ed while he o he cy okines emained unde ec able. This is consis en wi h clinical obse a ions epo ing ha a ew cy okines, including IL-6 and IL-8, we e de ec able in u ine a e a i s in a esical BCG adminis a ion, while o he cy okines equi ed mul iple BCG ins illa ions [43]. A e BCG challenge, he sec e ome o BC cells ex- p essing he sT s uc u e showed highe capaci y o s imula e cy okine sec e ion by mac ophages, u he suppo ing he no ion ha he sT an igen po en ia es he BC esponse o BCG. An in lamma o y en i onmen can ei he p omo e o inhibi umo p og ession, consis en wi h he no ion ha in lamma ion is a double edge swo d which can bo h e adica e he umo bu also uel i s g ow h. Mac- ophages a e di e en ia ed ei he as p o-in lamma o y M1 o an i-in lamma o y M2 pheno ypes, e en i in many cases hey a e in an in e media e condi ion. While a a iable capaci y o sec e e IL-6, IL-1βand TNF-αis sha ed by di e en ially pola ized mac ophages, an IL-12 A B Fig. 3 Cy o oxic e ec o H 2 O 2 on HT1376 T and HT1376 sT cells. a: cells we e ea ed wi h 5 mM H 2 O 2 o mock- ea ed as desc ibed in Me hods and coun ed. Da a o six expe imen s a e epo ed. The HT1376 sT cells a e mo e suscep ible o he oxic e ec o H 2 O 2 (**p= 0.005 acco ding o S uden ’s es ). b: phase con as mic og aph o ep esen a i e ields o he wo cell popula ions ea ed as desc ibed abo e, showing he s onge cy o oxic e ec s o H 2 O 2 on HT1376 sT . Scale ba : 100 μm Se e ino e al. BMC Cance (2018) 18:198 Page 6 o 9 low/IL-10 high pheno ype is he hallma k o M2 mac o- phages [44], which a e known o p omo e umo g ow h [45]. The mac ophages used in his s udy sec e ed IL-6, IL-8, IL-1βand TNF-αbu no IL-12 and li le IL-10 and a e p obably ep esen a i e o an in e media e condi ion be ween he wo ex eme pheno ypes. The na u e o he mac ophages associa ed wi h BC is indeed a iable as in- dica ed by he di e en le el o exp ession o he M2- speci ic ma ke CD163 among pa ien s [46]. In e es - ingly, he p edominance o M2 mac ophages is associ- a ed wi h highe s age and g ade [46] and wi h a wo se esponse o BCG [47]. The mos p ominen ansc ip omic change we ob- se ed because o ST3GAL1 exp ession and he conse- quen eplacemen o he T wi h he sT an igen in HT1376 cells was he dec eased exp ession o se e al genes in ol ed in di e en mechanisms o DNA epai and in he accu acy o ch omosomal seg ega ion. This esul ed in inc eased sensi i i y o HT1376 sT cells o he cy o oxic e ec o H 2 O 2. This is o in e es i one con- side s ha he gene a ion o eac i e oxygen species by BCG is a c ucial mechanism o BCG-induced damage o BC cells [48]. In e es ingly, also in glioma cells, ST3GAL1 exp ession esul ed in ansc ip omic changes a ec ing malignancy and he cell cycle [49], suppo ing he no ion ha a ca bohyd a e s uc u e on he cell su - ace can gene a e an “ou side in” low o in o ma ion modula ing gene exp ession [20]. BCG challenge esul ed in a deepe modula ion o he ansc ip ome in HT1376 sT han in HT1376T, sugges - ing ha he eplacemen o he T wi h he sT an igen on he cell su ace changes he de elopmen o he gene ic p og am igge ed by BCG con ac . E en hough genes in ol ed in in lamma o y and im- mune esponse we e ound o be modula ed by BCG challenge in HT1376sT cells, li le o no changes we e obse ed in genes encoding cy okines, including hose whose exp ession was s imula ed by BCG-challenge. Pos- sible disc epancies be ween gene and p o ein exp ession can be explained conside ing ha mul iple mechanisms op- e a ing a pos ansc ip ional and pos ansla ional le els (in- cluding non-coding RNAs, ansla ion egula o y mechanisms, p o easomal ac i i y) egula e p o ein exp es- sion. In addi ion, as shown o IL-1β, cy okine sec e ion can be egula ed by he elease o p e o med molecules om in acellula s o es, a he han a he le el o gene ansc ip ion [50]. The soluble ac o s esponsible o he s imula ion o cy okine sec e ion by mac ophages a e con- cei ably a e y complex cock ail o bioac i e compounds o p o ein and non-p o ein na u e, including biologically ac- i e molecules (e.g. p os aglandins, glycosaminoglycans) which a e no p ima y gene p oduc s bu p oduc s o mul- iple enzyma ic eac ions. Fo hese easons, he na u e o he molecules sec e ed by BC cells esponsible o he e ec on mac ophages may no be di ec ly ela ed o he gene ex- p ession p o ile. Conclusions In conclusion, ou da a show ha ST3GAL1 exp ession and he consequen eplacemen o he T by he sT an i- gen in BC cells induce ansc ip omic changes wi h a pu a i e impac on mul iple cellula unc ions associa ed wi h inc eased malignancy and suscep ibili y o oxida i e damage and s eng hens he in lamma o y esponse o mac ophages. This indica es ha ST3GAL1 and T/sT ca bohyd a e s uc u es can be ac o s wi h mul iple clinical implica ions in BC. Addi ional iles Addi ional ile 1: Figu e S1. ST3GAL1-o e exp ession in HT1376 cells (PPTX 130 kb) Addi ional ile 2: p alues calcula ed wi h ANOVA, ollowed by Tukey mul iple compa ison es o da a epo ed in Fig. 1and Fig. 2(PPTX 84 kb) Addi ional ile 3: GENES MODULATED IN HT1376sT CELLS AS COMPARED TO HT1376T CELLS. (XLSX 47 kb) Addi ional ile 4: CANCER-ASSOCIATED GENES MODULATED IN HT1376sT CELLS AS COMPARED TO HT1376T CELLS. (XLS 43 kb) Addi ional ile 5: GENES MODULATED BY BCG IN HT1376 sT (XLS 49 kb) Abb e ia ions BC: bladde cance ; BCG: Bacillus Calme e-Gué in; CMTMR: 5-(and-6)-(((4- chlo ome hyl)benzoyl)amino) e ame hyl hodamine; DMEM: Dulbecco’s modi ied Eagle medium; FCS: Foe al cal se um; FITC: Fluo escein iso hiocyana e; Gal: Galac ose; GalNAc: N-ace ylgalac osamine; GlcNAc: N-ace ylglucosamine; MES: (N-mo pholino)e hanesulphonic acid; MIBA: Mul iplex immune-beads assay; NMIBC: Non-muscle in asi e bladde cance ; PBS: Phospha e-bu e ed saline; PNA: Peanu (A achis hypogea) agglu inin; RPMI: Roswell Pa k Memo ial Ins i u e; Sia: sialic acid Acknowledgemen s We hank D . F ancesca Bo se i and D . Enzo Spisni, BIGEA Depa men o he Uni e si y o Bologna o he help wi h he mul iplex immune-beads assays, D . Ch is ine M. Be s o he c i ical eading o he manusc ip and D . Ma ia Le izia Bacchi-Reggiani (DIMES) o ad ices in s a is ical analysis. Funding This wo k was suppo ed by: Po uguese Founda ion o Science and Technology (FCT) PhD g an s SFRH/BD/45120/2008 (Paulo F. Se e ino), SFRH/ BD/81860/2011 (Ma iana Sil a) and SFRH/BD/100970/2014 (Mylène Ca ascal), Liga Po uguesa Con a o Canc o 2011 (Mylène A. Ca ascal); P émio Bluepha ma Ino ação Uni e sidade de Coimb a and he San ande To a/ Uni e sidade NOVA de Lisboa p izes (Paula Videi a). G an s om he Uni e si y o Bologna (Fabio Dall’Olio). Ma iangela Ca e a and Giulia Ven u i a e PhD s uden s suppo ed by g an s om he Uni e si y o Bologna. A ailabili y o da a and ma e ials The da ase s gene a ed du ing he cu en s udy a e a ailable om he co esponding au ho on easonable eques . Au ho s’con ibu ions P.F.S and M.S. pe o med he bulk o he expe imen al wo k, analysed da a and helped w i ing he manusc ip . M. Ca , G.V., M. Ca and R.B.F. pe o med pa o he expe imen al wo k. N.M. and M. Chi . con ibu ed o he es ablishmen o ansduced cell lines. A.A. pe o med mic oa ay expe imen s and analysed mic oa ay da a. P.A.V. and F.D concei ed he wo k, analysed he da a and w o e he manusc ip . All au ho s e ised c i ically he manusc ip , ha e gi en inal app o al o he e sion o be Se e ino e al. BMC Cance (2018) 18:198 Page 7 o 9 published and ag ee o be accoun able o all aspec s o he wo k in ensu ing ha ques ions ela ed o he accu acy o in eg i y o any pa o he wo k a e app op ia ely in es iga ed and esol ed. E hics app o al and consen o pa icipa e This s udy does no use samples om diseased pe sons. The blood used o he p epa a ion o monocy e-de i ed mac ophages was om heal hy blood dono olun a ies. Fo his, no s udy app o al was necessa y. The only au ho iza ion equi ed was ha ob ained om he Blood Collec ion Se ice o he Pizza di Hospi al in Bologna, I aly, which keeps he igh s on dono s’ blood samples. This au ho iza ion is a ailable o he Edi o . Consen o publica ion No applicable. Compe ing in e es s The au ho s decla e ha hey ha e no compe ing in e es s. Publishe ’sNo e Sp inge Na u e emains neu al wi h ega d o ju isdic ional claims in published maps and ins i u ional a ilia ions. Au ho de ails 1 Cen o de Es udos de Doenças C ónicas, CEDOC, NOVA Medical School/ Faculdade de Ciências Médicas, Uni e sidade NOVA de Lisboa, Campo dos Má i es da Pá ia, 130, 1169-056 Lisbon, Po ugal. 2 UCIBIO, Depa amen o Ciências da Vida, Faculdade de Ciências e Tecnologia, Uni e sidade NOVA de Lisboa, 2829-516 Capa ica, Po ugal. 3 Dipa imen o di Medicina Specialis ica, Diagnos ica e Spe imen ale, Sede di Pa ologia Gene ale, Uni e si à di Bologna, Via S. Giacomo 14, 40126 Bologna, I aly. 4 Cen o In e dipa imen ale Rice che sul Canc o “Gio gio P odi”, Uni e si à di Bologna, Bologna, I aly. Recei ed: 3 Ap il 2017 Accep ed: 8 Feb ua y 2018 Re e ences 1. Be e s RF, Ku h KH, Schamha DH. Role o u o helial cells in BCG immuno he apy o supe icial bladde cance . 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ST3GAL1-associa ed ansc ip omic p og am in glioblas oma umo g ow h, in asion, and p ognosis. J Na l Cance Ins . 2016;108(2) 50. S anley AC, Lacy P. Pa hways o cy okine sec e ion. Physiology (Be hesda). 2010;25(4):218–29. • We accep p e-submission inqui ies • Ou selec o ool helps you o ind he mos ele an jou nal • We p o ide ound he clock cus ome suppo • Con enien online submission • Tho ough pee e iew • Inclusion in PubMed and all majo indexing se ices • Maximum isibili y o you esea ch Submi you manusc ip a www.biomedcen al.com/submi Submi you nex manusc ip o BioMed Cen al and we will help you a e e y s ep: Se e ino e al. BMC Cance (2018) 18:198 Page 9 o 9