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Vocal repertoire and consistency of call features in the meagre Argyrosomous regius (Asso, 1801)

Bolgan, Marta,Pereira, Beatriz P.,Crucianelli, Aurora,Mylonas, Constantinos C.,Pousão-Ferreira, Pedro,Parmentier, Eric,Fonseca, Paulo,Amorim, M. Clara P.

Abstract

Passive Acoustic Monitoring (PAM) is a non-intrusive and cost-effective method capable of providing high-resolution, long-term information on the status and health of vocal populations and communities. To successfully monitor the same species over wide geographical and temporal scales, it is necessary to characterise the range of sound variability, as well as the consistency of sound features between populations. The meagre (Argyrosomus regius, Asso 1801) is an interesting case study because recent investigations suggest a wider vocal repertoire than previously described. In this study, meagre vocalizations were recorded and analysed from a variety of settings, ranging from rearing facilities to wild populations to provide a comprehensive characterisation of its vocal repertoire, while investigating the consistency of spawning sound features between populations. All sounds presented a similar acoustic structure in their basic unit (i.e. the pulse), while an important variability was found in the number of pulses; the meagre can emit sounds made of one single pulse or many pulses (up to more than 100). High level of overlap in the Principal Component Analysis made difficult to differentiate sound type clusters. Despite this, two sound types were identifiable: knocks (sounds from 1 to 3 pulses) and long grunts (sounds with more than 29 pulses). Discriminant Analysis carried out on PCA residuals showed that knock had the highest proportion of correct placement (92% of the observations correctly placed) followed by long grunts (80%). All other previously described sound types (intermediate grunt, short grunt and disturbance sounds) could not be separated and presented low levels of correct placement, suggesting that care should be taken when defining these as independent sound types. Finally, acoustic features consistency was found in meagre grunts emitted by different populations during spawning nights; statistical differences could be explained by recording settings and fish conditions. The results of this study provide important information for fostering PAM programs of wild meagre populations, while contributing to the discussion around the definition of fish sound types in vocal fish communities. Studies of this kind, which evaluate both variability and consistency of sound features, are of fundamental importance for maximising PAM efforts in the wild, at both the specific and the community level.

Full text

RESEARCH ARTICLE Vocal repertoire and consistency of call features in the meagre Argyrosomous regius (Asso,1801) Marta BolganID 1,2,3 *, Beatriz P. Pereira 1,2 , Aurora CrucianelliID 3 , Constantinos C. Mylonas 4 , Pedro Pousão-Ferreira 5 , Eric Parmentier 3 , Paulo J. Fonseca 6 , M. Clara P. Amorim 1,2 1MARE - Marine and Environmental Sciences Centre, ISPA - Instituto Universita ´rio, Lisbon, Portugal, 2Department of Animal Biology, Faculty of Science, University of Lisbon, Lisbon, Portugal, 3Laboratory of Functional and Evolutionary Morphology (Department of Biology, Ecology & Evolution), FOCUS, AFFISH-RC, Institut de Chimie B6c, University of Liège, Liège, Belgium, 4Institute of Marine Biology, Biotechnology and Aquaculture, Hellenic Center for Marine Research, Heraklion, Crete, Greece, 5Instituto Português do Mar e da Atmosfera, Olhão, Portugal, 6Department of Animal Biology and cE3cCentre for Ecology, Evolution and Environmental Changes, Faculty of Science, University of Lisbon, Lisbon, Portugal *[email protected] Abstract Passive Acoustic Monitoring (PAM) is a non-intrusive and cost-effective method capable of providing high-resolution, long-term information on the status and health of vocal populations and communities. To successfully monitor the same species over wide geographical and temporal scales, it is necessary to characterise the range of sound variability, as well as the consistency of sound features between populations. The meagre (Argyrosomus regius, Asso 1801) is an interesting case study because recent investigations suggest a wider vocal repertoire than previously described. In this study, meagre vocalizations were recorded and analysed from a variety of settings, ranging from rearing facilities to wild populations to provide a comprehensive characterisation of its vocal repertoire, while investigating the consistency of spawning sound features between populations. All sounds presented a similar acoustic structure in their basic unit (i.e. the pulse), while an important variability was found in the number of pulses; the meagre can emit sounds made of one single pulse or many pulses (up to more than 100). High level of overlap in the Principal Component Analysis made difficult to differentiate sound type clusters. Despite this, two sound types were identifiable: knocks (sounds from 1 to 3 pulses) and long grunts (sounds with more than 29 pulses). Discriminant Analysis carried out on PCA residuals showed that knock had the highest proportion of correct placement (92% of the observations correctly placed) followed by long grunts (80%). All other previously described sound types (intermediate grunt, short grunt and disturbance sounds) could not be separated and presented low levels of correct placement, suggesting that care should be taken when defining these as independent sound types. Finally, acoustic features consistency was found in meagre grunts emitted by different populations during spawning nights; statistical differences could be explained by recording settings and fish conditions. The results of this study provide important information for fostering PAM programs of wild meagre populations, while contributing to the discussion PLOS ONE PLOS ONE | https://doi.org/10.1371/journal.pone.0241792 November 5, 2020 1 / 20 a1111111111 a1111111111 a1111111111 a1111111111 a1111111111 OPEN ACCESS Citation: Bolgan M, Pereira BP, Crucianelli A, Mylonas CC, Pousão-Ferreira P, Parmentier E, et al. (2020) Vocal repertoire and consistency of call features in the meagre Argyrosomous regius (Asso,1801). PLoS ONE 15(11): e0241792. https://doi.org/10.1371/journal.pone.0241792 Editor: Dennis M. Higgs, University of Windsor, CANADA Received: March 22, 2020 Accepted: October 20, 2020 Published: November 5, 2020 Copyright: ©2020 Bolgan et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Data Availability Statement: All relevant data are within the paper and its Supporting information files. Funding: this study was funded by Fundacão para a Ciência e a Tecnologia, Portugal (project PTDC/ BIA-BMA/30517/2017 and project PTDC/BIA-BMA/ 29662/2017 and the strategic projects UID/MAR/ 04292/2019 granted to MARE and UID/BIA/00329/ 2019 granted to Centre for Ecology, Evolution and Environmental Changes). The funders had no role in study design, data collection and analysis, around the definition of fish sound types in vocal fish communities. Studies of this kind, which evaluate both variability and consistency of sound features, are of fundamental importance for maximising PAM efforts in the wild, at both the specific and the community level. Introduction Since the mid-20th century, the rapid increase in human population has resulted in a variety of human-induced changes to the biosphere, the geosphere and the atmosphere [1]. Human activities are destroying biodiversity around 1,000 times faster than natural ‘background’ rates [2] so that the modern loss of species diversity has been labelled as the ‘sixth extinction’ [3]. With ever increasing anthropogenic pressures on ecosystems, the monitoring, management and conservation of wild populations becomes imperative. One of the main challenges is to find non-invasive monitoring methods capable of providing high-resolution, long-term and large-scale information on habitat health and species welfare. Passive acoustic monitoring (PAM) is a non-intrusive, behaviourally unbiased, cost-effective method with the potential of providing high-resolution, long-term information on ecosystems health [4–7]. In aquatic environments, PAM involves the use of hydrophones to record all components of underwater soundscapes (i.e. the acoustic scene emanating from a habitat), including abiotic sounds (e.g. geophysical sources), biological sounds (invertebrates, fish and marine mammals) and human-generated noises (e.g. shipping, construction, oil and gas exploration) [8–12]. Natural sounds collected using PAM, especially those from vocal animals, can be used as proxies to learn about the diversity of species, habitat quality, the phenology of biological events and the health of fish and shellfish stocks [13]. The use of Passive Acoustics for monitoring fish populations has emerged as a valuable tool in fisheries science [8,11,14,15]. This method has been used to investigate fish presence, distribution, relative abundance, diel, lunar and seasonal cycles of activity, as well as for delimitating spawning areas and for studying wild fish spawning behaviour [8,11,15–22]. Since sound emission is associated with reproduction in many species, this method became especially useful for monitoring spawning sites at both temporal and geographical scales [15–17,19,21,23]. This is particularly true for the family of Sciaenidae, which spawning aggregations have been successfully monitored in the wild thanks to their communicative sounds [15–17,19–23]. On the other hand, studies monitoring patterns of vocal fish communities for inferring long-term information on species richness and ecosystem health are still relatively rare [24,25]. Two main methodological trends are emerging in such studies: the application of acoustic indexes and approaches based on the automatic detection of calls. The use of acoustic indices to unravel complex biophonic patterns is advantageous because it does not require prior knowledge of the targeted signals. However, acoustic indices, such as the Acoustic Complexity Index, cannot discern between fish sound diversity and abundance [26]. In this context, approaches based on manual or automated detection of fish sound types and sequences appear to be the key for describing high resolution fish biodiversity dynamics through passive acoustic monitoring [11,27,28]. Scientists interested in using fish sound types as units for single species monitoring, as well as for monitoring the health of vocal fish communities, face different challenges, such as: i) lack of standardized nomenclature for fish sound types, ii) reliance on the use of onomatopoeic names, iii) limited knowledge about most of the sound types recorded in natural habitats and iv) limited knowledge of the range of variability of fish sound types within a single species (e.g. PLOS ONE Meagre vocal repertoire and call features consistency PLOS ONE | https://doi.org/10.1371/journal.pone.0241792 November 5, 2020 2 / 20 decision to publish, or preparation of the manuscript. Competing interests: The authors have declared that no competing interests exist. vocal repertoire) [12,29–31]. Efforts to create a more uniform and objective sound nomenclature and to increase our knowledge on fishes’ acoustic repertoire are therefore warranted. Furthermore, to successfully monitor the same species over wide geographical and temporal scales, it is necessary to account for the range of variability of its acoustic repertoire. Finally, another fundamental requirement for reliable PAM concerns the assessment of call features’ consistency between populations, as demonstrated recently for the large scale and long-term monitoring of the brown meagre (Sciaena umbra, Linnaeus 1758) [32]. The common vernacular name of the teleost family of Sciaenidae, i.e. croakers and drummers, clearly points to their vocal abilities, which have been known and exploited for centuries [33–38]. Several studies have monitored sciaenids and their spawning aggregations in the wild by using PAM [16–17,19–22,32,39–41]. Despite this, sound production in this family has been documented in only about 8% of the extant species; furthermore, lack of consistency can be found in sound types definition and nomenclature, as well as in the type of features used for characterising sounds. The meagre (Argyrosomus regius, Asso 1801) is an interesting case because recent studies [41–43] suggest a wider vocal repertoire than previously described [37]. This species is widely distributed along the Atlantic coast of Europe and of Africa, as well as in the Mediterranean Sea [44] and has a significant commercial value for recreational and small-scale commercial fisheries, as well as aquaculture [45]; this implies that knowledge about meagre sound feature variability and consistency is imperative for populations monitoring over wide geographical and temporal scales. In this study, we characterised the variability of meagre sounds, as well as the consistency of sound features between spawning populations, with the final goal of providing valuable information for maximizing PAM efforts for this species in the wild. Furthermore, our results contribute to the discussion around the definition of “fish sound type”, which is the fundamental unit for monitoring status and health of vocal fish populations by using PAM. The specific aims of this study were therefore to i) characterise the overall acoustic repertoire of the meagre and ii) verify if consistency in sound temporal and spectral features can be found in spawning sounds emitted by meagre belonging to two different populations (South Portugal and South France). Materials and methods Acoustic data collection In order to provide a comprehensive characterisation of the meagre vocal repertoire (first aim), meagre vocalizations were recorded in a variety of settings, ranging from rearing facilities to wild populations. In particular, advertisement sounds (i.e. sounds naturally emitted by the fish during social interactions) were recorded in two research aquaculture rearing facilities as well as in the field (Tagus estuary, Portugal). Disturbance sounds (i.e. sounds emitted by the fish when hand-held) were registered at the rearing facility of the Instituto Português do Mar e da Atmosfera—Estac¸ão Piloto de Piscicultura de Olhão (IPMA—EPPO, Portugal). The consistency of calls features (second aim) was assessed for advertisement calls emitted during spawning nights by meagre belonging to two different populations (South Portugal and France), hosted in two aquaculture facilities. Captivity recordings; advertisement sounds. Advertisement sounds were recorded in rearing facilities from two groups of adult meagre breeders belonging to two original populations: at IPMA, fish belonged to the second and the fourth generations of originally wild populations from Southern Portuguese waters. At the Institute of Marine Biology, Biotechnology and Aquaculture—IMBBC, Hellenic Centre for Marine Research (HCMR, Heraklion, Crete, PLOS ONE Meagre vocal repertoire and call features consistency PLOS ONE | https://doi.org/10.1371/journal.pone.0241792 November 5, 2020 3 / 20 Greece), fish were the third farmed generation of originally wild Mediterranean French populations. Authorization for scientific experimental work at IPMA was obtained by the Portuguese National Authority for Animal Health, i.e. DGAV (DGAV reference 0421/000/000/2018), in accordance with European regulations. For the experiments at HCMR-IMBBC, ethical approval for the experimental procedures was obtained from the relevant Greek Authorities (National Veterinary Services, Heraklion, Crete) under the license No 255356 (AΔA:6ΛI17ΛK-PΛO). The approvals were obtained for the number of fish used and the rearing conditions, handling/sampling (when appropriate). Samplings were always conducted under anaesthesia. Specifically, for the induction of oocyte maturation, ovulation and spawning (see below), fish were initially tranquilized in their tank with the use of clove oil (0.01 ml l - 1 ). Then, the fish were transferred to a separate tank for complete sedation with a higher concentration of clove oil (0.03 ml l -1 ) [46]. All procedures conducted in both facilities were in accordance to the “Guidelines for the treatment of animals in behavioural research and teaching” [47], the Ethical justification for the use and treatment of fishes in research [48] and the “Directive 2010/63/EU of the European parliament and the council of 22 September 2010 on the protection of animals used for scientific purposes” [49]. At IPMA, eight sexually mature, 6 and 9-year-old meagre (6 females and 2 males) with a body weight of 4.3 to 9 kg were reared in one 3.6 m 3 (3 m 2 area, 1.2 m deep) indoor concrete parallelepipedal tank supplied with filtered seawater which temperature ranged from 14˚C to 23˚C, and under simulated ambient photothermal conditions (10L/14D hours, with low light intensity at dawn and dusk). The broodstock tank was fitted with passive egg collectors, which were examined frequently during the expected spawning days and, when present, floating eggs were removed, incubated and reared according to protocols developed at IPMA [50]. Sound production was monitored round-the-clock (24 h / day) from February to July 2018. A custom-made hydrophone [51] was positioned vertically in the centre of the tank at approximately 30 cm from the bottom and connected to a stand-alone 16 channel datalogger (LGR– 5325, Measurement Computing Corp, Norton Ma USA; 12 kHz sampling rate 16 bit, ±1 V range). For the purpose of this manuscript, sound production was inspected during two phases: the first phase represented the pre-spawning period, corresponding to the 5 th day prior to the first spawning event (i.e. 28/04/2018), while the second phase consisted of the spawning period, from the evening that preceded egg deposition to the day after egg deposition (i.e. 0203-04/05/2018 mean water T = 19.2 ˚C; 18-19-20/05/2018 mean water T = 21.8 ˚C; 04-05-06/ 06/2018 mean water T = 20.1 ˚C; 04-05-06-07/07/2018 mean water T = 21.1 ˚C). At HCMR, seventeen sexually mature, 5-year-old meagre (11 females and 6 males) with a body weight of 5.0 to 11.3 kg were housed in a 15 m 3 (6.5 m 2 area, 2.45 m deep) concrete tank supplied with seawater under simulated ambient photothermal conditions, using heated/ cooled water and LED lights of ocean lighting spectrum (Aquaray, TMC, UK). The broodstock tank was fitted with passive egg collectors, which were examined frequently during the expected spawning days/times, when eggs were collected and evaluated under a microscope to estimate fecundity and fertilization success. Sound production was monitored by using an underwater acoustic datalogger (SNAP = hydrophone sensitivity; −170 dB re. 1 V/μPa, Loggerhead Instruments, FL, USA) deployed in the centre of the tank. The SNAP recorded .wav files at 44100 Hz, 16 bits and was set for recording 300 s every 900 s, meaning that the meagre activity was monitored thanks to 3 recordings, each lasting 5 minutes, taken each hour. Sound production was monitored during three phases: reproductive quiescence (5-8/03/2018), prespawning period (3-7/05/2018) and spawning period (8-10/05/2018). The reproductive quiescence recordings were carried out under lower water temperature (T = 16 ˚C) and with less hours of light than during the breeding season. The second phase represented the onset of the PLOS ONE Meagre vocal repertoire and call features consistency PLOS ONE | https://doi.org/10.1371/journal.pone.0241792 November 5, 2020 4 / 20 breeding season (water T = 20.0 ˚C), when fish were confirmed to be in reproductive conditions (female contained fully vitellogenic oocytes, >500 μm in diameter, while males were releasing sperm upon application of gentle abdominal pressure). The last recording session was carried out after the females were induced to undergo oocyte maturation, ovulation and spawning using an injection of gonadotropin releasing hormone agonist (GnRHa) at a dose of 15 μg of GnRHa kg -1 body weight. Males were administered an implant containing 350 μg of GnRHa to enhance spermiation [52,53]. Following this protocol, meagre spawned over three consecutive days, beginning 36 h after the hormonal therapy (08/05/2018 to 10/05/2018, water T = 20.0 ˚C). Captivity recordings; disturbance sounds. Disturbance sounds were recorded at IPMA during July 2018. The procedure started by fasting the same individuals recorded before (N individuals = 8; 4.1 to 10.3 Kg mean body weight) for 24 hours prior to recordings. Water level in the rearing tank was lowered to 1 m to reduce stress and to prevent fish from jumping while being captured. Fish were anaesthetised using 40 ppm of 2-phenoxyethanol (2-PE). After ca. 20 min from the provision of the anaesthetic, anaesthetised individuals were captured with a plastic sleeve bag and transferred in groups of 3 to 200 L plastic circular containers provided with aerated seawater. Fish were here allowed to recover for approximately 15 min. Then, each fish was identified by chip reading and transferred with a sleeve into a second 200 L container (with oxygenated seawater), where individual recordings took place. The fish was kept inside the sleeve and stimulated by pressing the caudal peduncle; disturbance sounds were recorded for 3 min using a High Tech 94 SSQ hydrophone (High Tech Inc., Gulfport, MS, USA; sensitivity of –165 dB re 1 V/μPa, frequency response up to 6 kHz within ±1 dB), placed at approximately 10 cm from the fish’s abdomen, and connected to a Tascam DR-40 Portable Digital Recorder (44.1 kHz sampling rate, 16 bit; TEAC, Europe Gmbh). Field data collections. Meagre vocal activity was monitored during summer 2018 in the Tagus estuary (Air Force base 6, Montijo, Portugal; 38˚42’N, 8˚58’W). Sound recordings were obtained from wild adult fish of unknow size, sex ratio and group size. A High Tech 94 SSQ hydrophone (High Tech Inc., Gulfport, MS, USA; sensitivity of –165 dB re 1 V/μPa, frequency response up to 6 kHz within ±1 dB) was anchored at about 20 cm from the bottom to a stainless-steel holder projecting from a concrete base where the cable was attached to minimise current-induced hydrodynamic noise. The signal from the hydrophone was recorded (4 kHz, 16 bit resolution) by a 16 channel stand-alone data logger (Measurement Computing Corporation LGR-5325, Norton, Virginia, USA). Water depth varied approximately between 3 to 6 m, depending on tide. For the purpose of this study, and because meagre sounds in the field recordings were produced in dense choruses in which individual calls could not be distinguished, sounds with a good Signal-to-Noise Ratio (SNR) emitted before or after the chorus were randomly extracted from one day in March (17/03/2018), one day in April (16/04/2018, mean water T = 15.6 ˚C), one day in May (18/05/2018, mean water T = 19.3 ˚C), three days in June (15/06/2018, mean water T = 20.0 ˚C; 16/06/2018, mean water T = 20.0 ˚C; 17/06/2018, mean water T = 20.4 ˚C) and one day in August (15/08/2018, mean water T = 22.0 ˚C). Acoustic data analysis The audio files were analysed by visual and aural inspection by using Raven 1.5 for Windows (Bioacoustic Research Program, Cornell Laboratory of Ornithology, Ithaca, NY, USA). All audio files were downsampled at 4 kHz and spectrograms were visualized using a 64 points FFT, Hanning window. For each situation (i.e.advertisement sounds IPMA,advertisement sounds HCMR,disturbance sounds,and field recordings), a sub-sample of sounds with good SNR was analysed (N = 741 sounds). Spectral features were measured from power spectra (4 PLOS ONE Meagre vocal repertoire and call features consistency PLOS ONE | https://doi.org/10.1371/journal.pone.0241792 November 5, 2020 5 / 20 kHz, FFT size 512 points, Hanning window, 50% time overlap) while temporal parameters were measured from oscillograms. The following sound features were measured for all sounds: i) peak frequency (Peak Freq., Hz; the frequency with the highest energy), ii) Q3 frequency (Q3 Freq., Hz; the frequency that divides the spectral content into two intervals containing 75% and 25% of the energy), iii) Q1 frequency (Q1 Freq., Hz; the frequency that divides the spectral content into two intervals containing 25% and 75% of the energy), iv) sound duration (ms; the time from the onset of the first pulse to the offset of the last pulse), v) number of pulses and vi) pulse period (ms; the time interval between the peaks of two consecutive pulses in a sound). All pulse periods within each sound were manually measured (N = 20,736 measured pulses). To evaluate the variability in number of pulses in all analysed sounds, a histogram depicting the proportion of sounds (%, N = 741) having a specific number of pulses was plotted. To assess pulse period variability within each sound, pulse period was plotted against pulse succession. Mean and standard deviation were calculated for all acoustic features by categorising sounds on the basis of their number of pulses, following the classification proposed by [41]. In particular, knocks were sounds made of 1 to 3 pulses, short grunts were sounds ranging from 4 to 6 pulses, intermediate grunts were sounds made of 7 to 29 pulses and long grunts were sounds with more than 30 pulses. Statistical analysis Statistical analysis was performed by using STATISTICA (version 10, Statsoft, Tulsa, OK, USA) and Minitab (version 18, Minitab LLC, State College, Pennsylvania, USA). To examine if independent and mutually exclusive sound classes could be identified, a Principal Component Analysis (PCA) was performed in Minitab 18 on all sounds analysed as part of this study (N = 741). All acoustic features were firstly inspected for correlation; many acoustic features were found to be highly correlated and PCA was performed by using only Q1 Frequency, Peak frequency, Q3 frequency, number of pulses and pulse period as variables. The correlation matrix was used to calculate the principal components, as variables had different scales and they needed to be standardised. A scree plot for the first five components and a score plot for the first two components (which cumulatively explained 66.5% of the variance) were generated. A linear discriminant analysis was run on the PCA residuals to validate the adequacy of sound type classification. To examine the probability of transition between the sound categories proposed for meagre by [41], a total of 40 sequences made of 20 sequential sounds (total of 720 transitions) were randomly selected between all datasets except for disturbance sounds. As an example, the scoring of a sequence produced this kind of string: long grunt!intermediate grunt!long grunt!long grunt and so on. Data were entered in contingency tables, with preceding sound categories in rows and immediately following sound categories in columns. Chi-square analysis at 0.001 level of significance was run within these contingency tables. Cells with residuals of chi-square exceeding the chosen level of significance were identified to detect the sequences that occurred more (or less, if the residuals were negative) frequently than predicted by chance [54]. Sequence analysis of sound types was represented graphically in flow diagrams. Each sound type was outlined as a circle, and sequences between preceding and immediately following sound types were shown by connecting these circles with arrows proportional in width to magnitude of the chi-square residuals. The consistency of acoustic features of sounds emitted by the two genetically distant meagre populations (South Portugal and Mediterranean Sea, France [55]) was examined by comparing only sounds emitted during spawning nights to minimize spurious variability (N = 244 PLOS ONE Meagre vocal repertoire and call features consistency PLOS ONE | https://doi.org/10.1371/journal.pone.0241792 November 5, 2020 6 / 20 sounds). Analysis of Covariance (ANCOVA) was performed on all measured acoustic features, using the aquaculture facility as factor (IPMA or HCMR) and water temperature as a covariate, as temperature has been proven to influence sound features in animals such as fish, which are poikilotherms [41,56,57]. ANCOVA was run on all sounds considered together, as well as on sounds assigned to different categories on the basis of their number of pulses (short grunts, intermediate grunts and long grunts). To meet ANOVA assumptions, data were log 10 -transformed prior to the ANCOVA analysis. Results Argyrosomous regius emitted pulsed sounds with most energy below 1 kHz (Fig 1), where for pulse we mean a sharp increase in acoustic energy which amplitude decays rapidly [31]. Although all sounds presented a similar acoustic structure in their basic unit, i.e. the pulse (Fig 1a,S1 and S2 Figs), the number of pulses within a single sound presented an important variability (Figs 1and 2a). The meagre can indeed emit sounds made of one single isolated pulse, few pulses, or many pulses up to more than 100 pulses (Figs 1and 2a,Table 1). In sounds consisting of more than a few pulses, amplitude modulation (i.e. change in the amplitude level of the soundwave over time) can be present (Fig 1e), but it is generally restricted to the first pulses within the call (e.g. Fig 1f and 1i). Pulse period succession was rather regular within the same sound, where most of the pulse period variability occurred within the first pulses (Fig 2b and 2c). After this first initial variability, pulse period showed an extremely reduced range of variation even in very long sounds (more than 100 pulses) (Fig 2c). In knocks made of more than 1 pulse, pulse period was on average longer than in grunts (Table 1). This explains why knocks and grunts sound different when auditioned, despite of their similarity in pulse envelope (Fig 1a,S2 Fig). Grunts’ pulse period is rather quick in both disturbance and advertisement sounds (Table 1), so that these sounds are heard as a unit (onomatopoeically “grunt”) rather than a train of individual pulses. Principal Component Analysis carried out on all analysed sounds (N = 741) showed that 66.5% of the variance was explained by spectral features such as peak and Q1 frequency, and temporal features such as number of pulses and pulse period (Table 2). When considering sound type categories (Fig 3a), the score plot of the first two principal components showed very high level of overlap, especially between short, intermediate grunts and disturbance sounds (Fig 3a). Overall, only 62% of sounds were placed into the correct sound type category by the discriminant function analysis; knock had the highest proportion of correct placement (92% of the observations correctly placed) followed by long grunts (80%) (DFA, d.f. = 8, P <0.001, Table 3). Very high overlap could also be observed in the score plot of the first two principal components when considering recording settings and locations (Fig 3b); this, in its turn, suggests consistency of call features between settings and populations. Sequence analysis showed that knocks, long grunts and intermediate grunts tend to be produced in repetitive sequences more often than predicted by chance in the examined datasets (i.e. advertisement sounds recorded at IPMA and HCMR and field recordings, X 2 = 1198.7, df = 9, p.value <0.001; Table 4;Fig 4). Interestingly, long sequences of knocks (which could last hours) were recorded in the field and during spawning nights at IPMA, but they were never recorded during spawning nights at HCMR. At both aquaculture facilities, spawning nights were characterised by long sequences of numerous and loud long grunts. In the field, dense choruses of grunts, lasting for hours, have been recorded. In more rare cases, sequences of long and intermediate grunts were PLOS ONE Meagre vocal repertoire and call features consistency PLOS ONE | https://doi.org/10.1371/journal.pone.0241792 November 5, 2020 7 / 20 Fig 1. Oscillograms and spectrograms representing the variability of Argyrosomus regius vocal repertoire: a) pulse waveform (a1 = pulse waveform of 1 pulse knock, see rectangle in b; a2 = pulse waveform within a long grunt, see rectangle in g); b) knocks (1, 2 and 3 pulses); c) short grunt (4 pulses); d) short grunt (6 pulses); e) intermediate grunt (11 pulses) with a typical pattern in amplitude modulation; f) intermediate grunt (24 pulses); g) long grunt (44 pulses) with limited amplitude modulation; h) long grunt (87 pulses) and i) long grunt (100 pulses) with a typical pattern in amplitude modulation. Sampling frequency 4 kHz, 64 point FFT (frequency resolution: 63 Hz), Hamming window, 50% overlap. https://doi.org/10.1371/journal.pone.0241792.g001 PLOS ONE Meagre vocal repertoire and call features consistency PLOS ONE | https://doi.org/10.1371/journal.pone.0241792 November 5, 2020 8 / 20 Fig 2. a) Number of pulses (proportion of sounds, %) in Argyrosomus regius sounds (all sounds analysed as part of this study, i.e. N = 741); b) pulse period succession in grunts having less than 20 pulses and c) pulse period succession in grunts having more than 20 pulses (the box on the upper right of panel c represents a zoom on the first 20 pulses). https://doi.org/10.1371/journal.pone.0241792.g002 PLOS ONE Meagre vocal repertoire and call features consistency PLOS ONE | https://doi.org/10.1371/journal.pone.0241792 November 5, 2020 9 / 20 applied in both marine and freshwater environments [27,69]. In particular, richness, diversity and abundance of fish sound types revealed a strong relationship with taxonomic diversity in the Mediterranean Sea [27], thus potentially informing on habitat health. One of the widest unidentified sound type categories is that labelled as “pulse series”, sound category within which meagre sounds would fall in. A major problem faced by scientists when analysing the “pulse series category” in communities in which the emitter (and therefore its repertoire) is unknown, is to decide at which level the subdivision of this category should stop. This decision is particularly important if the number of subcategories (i.e. sound types) is then used for characterising taxonomic diversity. Our study shows that the intra-variability of this fish sound type category can be extremely wide even if only one vocal species is present, and proves the importance of this kind of studies not only in the frame of single species monitoring, but also in the frame of the relatively new, continuously developing field of vocal fish community ecology. Finally, it is possible that high variability within the “pulse series” sound category informs on species welfare; if specific behavioural significances are linked with number of pulses, a high variability might highlight an extensive diversity of behaviours, contexts, age classes and sizes [42,43], which are all crucial for the stability of species and of populations. Together with inter-specific comparisons of sympatric species’ vocal repertoire, the evaluation of both variability (e.g. vocal repertoire) and of consistency of sound features within the same species is of fundamental importance for maximizing PAM efforts in the wild, both at the specific and at community level. Further studies addressing the intra-specific variability range of fish pulsed sounds and linking these metrics with population health are strongly encouraged. Supporting information S1 Fig. Oscillogram of meagre pulses (within grunts) recorded in different conditions. Oscillograms of seven consecutive pulses within grunts recorded in the field and in captivity (HCMR and IPMA). (TIF) S2 Fig. Oscillogram of meagre pulses (knocks and short grunts) recorded in different conditions. Oscillograms of knocks recorded in the field and of a short grunt recorded in captivity (HCMR). (TIF) Acknowledgments The authors are grateful to the team of the Institute of Marine Biology, Biotechnology and Aquaculture (Hellenic Center for Marine Research, Greece); in particular, authors would like to thank Emmanuela Vernadou and Andrea Bertini. The authors are also grateful to the team at Instituto Português do Mar e da Atmosfera—Estac¸ão Piloto de Piscicultura de Olhão (IPMA-EPPO, Portugal). Finally, authors would like to thank Manuel Vieira for constructive discussions and an anonymous reviewer for constructive feedbacks on this manuscript. Author Contributions Conceptualization: Marta Bolgan, Paulo J. Fonseca, M. Clara P. Amorim. Data curation: Marta Bolgan, Beatriz P. Pereira, Aurora Crucianelli, Eric Parmentier, Paulo J. Fonseca, M. Clara P. Amorim. Formal analysis: Marta Bolgan, Beatriz P. Pereira, Aurora Crucianelli. PLOS ONE Meagre vocal repertoire and call features consistency PLOS ONE | https://doi.org/10.1371/journal.pone.0241792 November 5, 2020 16 / 20 Funding acquisition: Eric Parmentier, M. Clara P. Amorim. Investigation: Marta Bolgan, Beatriz P. Pereira, Aurora Crucianelli, Constantinos C. Mylonas, Pedro Pousão-Ferreira. Methodology: Marta Bolgan, Paulo J. Fonseca, M. Clara P. Amorim. Project administration: Eric Parmentier, M. Clara P. Amorim. Resources: Constantinos C. Mylonas, Pedro Pousão-Ferreira, Paulo J. Fonseca, M. Clara P. Amorim. Software: Paulo J. Fonseca, M. Clara P. Amorim. Supervision: Marta Bolgan, Eric Parmentier, Paulo J. Fonseca, M. Clara P. Amorim. Validation: Marta Bolgan, Beatriz P. Pereira, Aurora Crucianelli, Constantinos C. Mylonas, Paulo J. Fonseca, M. Clara P. Amorim. Visualization: Marta Bolgan. Writing – original draft: Marta Bolgan. Writing – review & editing: Marta Bolgan, Beatriz P. Pereira, Aurora Crucianelli, Constantinos C. 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