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Medicinal Plant Leaf Extract From Sage and Lemon Verbena Promotes Intestinal Immunity and Barrier Function in Gilthead Seabream (Sparus aurata) Ricardo Salomo ´n 1,2 , Felipe E. Reyes-Lo ´pez 3,4,5 , Lluis Tort 3 , Joana P. Firmino 1,2 , Carmen Sarasquete 6 , Juan B. Ortiz-Delgado 6 , Jose ´C. Quintela 7 , Jose ´M. Pinilla-Rosas 7 , Eva Vallejos-Vidal 8 *and Enric Gisbert 1 * 1 Aquaculture Program, Institut de Recerca i Tecnologia Agroalimentàries (IRTA), Centre de Sant Carles de la Ràpita (IRTASCR), Sant Carles de la Ràpita, Spain, 2 PhD Program in Aquaculture, Universitat Autònoma de Barcelona, Bellaterra, Spain, 3 Department of Cell Biology, Physiology and Immunology, Universitat Autònoma de Barcelona, Bellaterra, Spain, 4 Facultad de Medicina Veterinaria y Agronomı ´a, Universidad de Las Ame ´ricas, Santiago, Chile, 5 Consorcio Tecnolo ´gico de Sanidad Acuı ´cola, Ictio Biotechnologies S.A., Santiago, Chile, 6 Instituto de Ciencias Marinas de Andalucı ´a (ICMAN-CSIC), Universidad de Ca ´diz, Ca ´diz, Spain, 7 Natac Biotech, Madrid, Spain, 8 Centro de Biotecnologı ´a Acuı ´cola, Departamento de Biologı ´a, Facultad de Quı ´mica y Biologı ´a, Universidad de Santiago de Chile, Santiago, Chile The inclusion of a medicinal plant leaf extract (MPLE) from sage (Salvia officinalis) and lemon verbena (Lippia citriodora), rich in verbascoside and triterpenic compounds like ursolic acid, was evaluated in gilthead seabream (Sparus aurata) fed a low fishmeal-based diet (48% crude protein, 17% crude fat, 21.7 MJ kg -1 ,7%fishmeal, 15% fish oil) for 92 days. In particular, the study focused on the effect of these phytogenic compounds on the gut condition by analyzing the transcriptomic profiling (microarray analysis) and histological structure of the intestinal mucosa, as well as the histochemical properties of mucins stored in goblet cells. A total number of 506 differentially expressed genes (285 upand 221 down-regulated) were found when comparing the transcriptomic profiling of the intestine from fish fed the control and MPLE diets. The gut transcripteractome revealed an expression profile that favored biological mechanisms associated to the 1) immune system, particularly involving T cell activation and differentiation, 2) gut integrity (i.e., adherens and tight junctions) and cellular proliferation, and 3) cellular proteolytic pathways. The histological analysis showed that the MPLE dietary supplementation promoted an increase in the number of intestinal goblet cells and modified the composition of mucins’glycoproteins stored in goblet cells, with an increase in the staining intensity of neutral mucins, as well as in mucins rich in carboxylated and weakly sulfated glycoconjugates, particularly those rich in sialic acid residues. The integration of transcriptomic and histological results showed that the evaluated MPLE from sage and lemon verbena is responsible for the maintenance of intestinal health, supporting gut Frontiers in Immunology | www.frontiersin.org May 2021 | Volume 12 | Article 6702791 Edited by: Samuel A. M. Martin, University of Aberdeen, United Kingdom Reviewed by: Silvia Torrecillas, University of Las Palmas de Gran Canaria, Spain Marina Machado, University of Porto, Portugal *Correspondence: Enric Gisbert [email protected] Eva Vallejos-Vidal [email protected] Specialty section: This article was submitted to Comparative Immunology, a section of the journal Frontiers in Immunology Received: 20 February 2021 Accepted: 26 April 2021 Published: 14 May 2021 Citation: Salomo ´nR,Reyes-Lo ´pez FE, Tort L, Firmino JP, Sarasquete C, Ortiz-Delgado JB, Quintela JC, Pinilla-Rosas JM, Vallejos-Vidal E and Gisbert E (2021) Medicinal Plant Leaf Extract From Sage and Lemon Verbena Promotes Intestinal Immunity and Barrier Function in Gilthead Seabream (Sparus aurata). Front. Immunol. 12:670279. doi: 10.3389/fimmu.2021.670279 ORIGINAL RESEARCH published: 14 May 2021 doi: 10.3389/fimmu.2021.670279
homeostasis and increasing the integrity of the intestinal epithelium, which suggests that this phytogenic may be considered as a promising sustainable functional additive for aquafeeds. Keywords: cell proliferation, feed additive, gut health, innate immunity, lectin histochemistry, ursolic acid, verbascoside acid, GALT INTRODUCTION Aquaculture will supply the majority of aquatic dietary protein by 2050 (1), playing a relevant role in food security and supply, and poverty alleviation (2). The sustained growth of aquaculture is highly dependent on the intensification of production (3), sustainable feed formulations (4) and generating farming conditions supporting fish health and welfare (5). Among the former concepts, disease is considered a main persistent threat to intensive fish farming, which represents an estimated US$6 billion loss per annum at a global scale (5). Under this scenario, aquaculture depends on the use of antibiotics to fight against infectious diseases that threatens production (6), with emerging infectious diseases forecast to increase with warmer temperatures (7). However, their use tend to result in the emergence of antimicrobial resistant bacteria, which may not represent a direct threat in terms of aquatic food consumption, but they could directly impact production itself by lowering drug efficacy, decreasing the animal’s immune system and selecting more virulent strains of pathogens (7). Considering the above-mentioned reasons, along with the increasing public awareness regarding food safety issues and the environmental impact linked to antibiotics’use and animal welfare (7,8), the development of functional feeds focused on promoting and modulating the host’s immune response has been encouraged during the last decade (9–12). Functional feeds are recognized for promoting the growth, welfare and health of farmed animals coupled with an improvement and/or modulation of their immune system, as well as inducing physiological benefits beyond traditional feeding practices (13). In this sense, by preventive health management through the diet, fish can divert more energy to somatic growth and reduce biological energy reserves needed to fight disease or stress resistance (14). Furthermore, they can be used in addition to chemotherapeutic agents and vaccines (15). Among the long list of feed additives usedinanimalproduction(9,16), phytogenics derived from herbs, spices, medicinal or aromatic plants are residue-free, unlike synthetic antibiotics, and are safe ingredients for sustainable feeds (11,17,18). Although the mode of action of most phytogenic feed additives has not yet been fully elucidated, they are well-known for their antimicrobial, immunomodulatory, antioxidative, and growth-promoting effects in livestock (17) and aquatic animals (9,18). In a recent study from our research group, we showed that a phytogenic feed additive from sage (Salvia officinalis, Lamiaceae) and lemon verbena (Lippia citriodora, Verbenaceae) is an effective additive for aquafeeds since its inclusion at 0.1% in diets with low fishmeal (FM) content not only improved some key performance indicators (i.e., growth and feed efficiency performances), but also promoted fish systemic immunity. In particular, an ex vivo study with splenocytes from fish fed this phytogenic exposed to lipopolysaccharide (LPS) showed an upregulation of genes involved in non-specific immune response, as well as proand anti-inflammatory cytokines, surface T-cell marker cd4, and antioxidative stress enzymes (14). However, the effects of this phytogenic feed additive still needs to be explored in terms of local immune response, especially at the intestinal level, since optimal health and functionality of the intestinal mucosa is essential for sustainable animal production (19,20). This is of special relevance under the current scenario in which aquafeeds are formulated with low levels of fishmeal (FM) (21), since several studies have indicated that low FM diets compromised systemic immunity (22–25), as well as gut immune response (26,27). In this context, intestinal immunity is a key factor in maintaining the general health of aquatic animals (20). The intestinal mucosa is a complex organ composed of the digestive epithelium with its specific structure, the gut-associated lymphoid tissue (GALT), and the mucus overlying the epithelium with its commensal microbiota (19). Furthermore, the intestinal epithelium acts as a selectively permeable barrier for dietary nutrients, electrolytes and water, while maintaining an effective defense against pathogens and tolerance towards dietary antigens. Thus, the GALT is reputed for mediating mucosal innate and adaptive immune responses, as well as being a key element for proper distinction between pathogens and commensal microbiota inhabiting the intestine (28–30). Considering the importance of interaction between the diet and the gut, in the current study we evaluated the transcriptomic profile and histochemical properties of mucins stored in goblet cells of the intestine in juvenile gilthead seabream (Sparus aurata) fed a functional diet containing a medicinal plant leaf extract (MPLE) from sage and lemon verbena. This species is recognized as the most important Mediterranean aquaculture fish species in terms of volume and economic value (31). For this purpose, we focused on the modulation of the intestinal mucosa functionality and health by the above-mentioned phytogenics when included in a diet with low fishmeal levels. MATERIAL AND METHODS Diets, Fish and Rearing Conditions Two isoproteic (48% crude protein), isolipidic (17% crude fat) and isoenergetic (21.7 MJ kg -1 ) experimental diets were formulated with a low FM content (7% FM) as described in Salomon et al. (14). Diets, named as control and MPLE, only Salomo ´n et al. Phytogenics Promotes Fish Gut Health Frontiers in Immunology | www.frontiersin.org May 2021 | Volume 12 | Article 6702792
differed in their content of the feed additive evaluated, the MPLE obtained from sage and verbena leaves, which was included in the MPLE diet at 0.1% (Table 1). The MPLE was obtained by NATAC Biotech SL using water/ethanol extraction (plant leaf extract ratio 5:1) and characterized as described in Arthur et al. (32)andWo jciak-Kosior et al. (33). The tested extract (proximate composition: 73% carbohydrates, 2% crude lipids, <1% crude proteins, 5% salts and 4% water) contained 10%, ursolic acid, 3% other triterpenic compounds, 2% verbascoside and <1% polyphenols. Thus, the content in plantderived bioactive compounds in the MPLE diet was 100 ppm ursolic acid, 30 ppm other triterpenic compounds, 60 ppm verbascoside and <10 ppm polyphenols. This phytogenic was incorporated in the mixture prior to extrusion. In brief, all powder ingredients were mixed in a double-paddle mixer (model RM90L, Mainca, Spain) and ground (below 250 μm) in a micropulverizer hammer mill (model SH1, Hosokawa-Alpine, Germany). Diets were manufactured with a twin-screw extruder (model BC45, Clextral, France) with a screw diameter of 55.5 mm. Extruded pellets were dried in a vibrating fluid bed dryer (model DR100, TGC Extrusion, France). Oils were added by vacuum coating (model PG-10VCLAB, Dinnissen, The Netherlands). Immediately after coating, diets were packed in sealed plastic buckets and shipped by road to the facilities at IRTA Sant Carles de la Ràpita, Spain. Both extruded diets (pellet size: 2 mm) used in this trial were manufactured by SPAROS Lda. (Portugal) and kept at 4°C until their administration. Proximate composition of the extract and experimental diets have been described in Salomon et al. (14). A total of 300 gilthead seabream (body weight, BW = 5.0 ± 0.2 g; mean ± standard deviation) were obtained from a commercial fish farm, Piscicultura Marina Mediterranea SL (Andromeda Group, Burriana, Spain) and transported to the experimental facilities of IRTA in Sant Carles de la Ràpita (Tarragona, Spain). Then, fish were acclimatized for three weeks in 450 L tanks connected to a water recirculation system (IRTAmar™) at an initial density of 2 kg m - ³. Acclimation was conducted in the same experimental tanks (450 L) where the nutritional experiment was carried out. Just before the start of the trial, all animals were gently anesthetized (50 mg l -1 MS-222, Sigma-Aldrich, Madrid, Spain), individually measured in BW (26.0 ± 0.2 g) and distributed homogeneously among the eight experimental tanks (n = 35 fish per tank; 4 replicate tanks per experimental diet). During the trial that lasted 92 days, fish were fed at the daily rate of 3.0% of the stocked biomass, which approached apparent satiation as described in Salomon et al. (14). Feed ration was regularly adjusted by means of intermediate samplings along the trial. At the end of the trial, all fish were anesthetized as previously indicated and measured for individual BW. Fish performance in terms of survival (S control diet = 98.0 ± 1.0%; S MPLE diet = 99.0 ± 0.8%), growth (BW control diet = 173.8 ± 8.2 g; BW MPLE diet = 189.6 ± 5.0g) and feed conversion ratio (FCR control diet = 1.25 ± 0.04; FCR MPLE diet = 1.10 ± 0.04) was already published in Salomon et al. (14). Twelve fish from each experimental diet (n total= 3 fish per tank replicate) were randomly selected and sacrificed with an overdose of anesthetic (300 mg l -1 MS-222) for gut transcriptomic and histological analyses. Sacrificed animals were eviscerated and mid-anterior intestine samples (1-1.5 cm length per specimen) were put in RNAlater™(Invitrogen, Thermo Fisher Scientific, Lithuania), incubated overnight at 4°C, and stored at -80°C until RNA extraction. This region of the intestine (mid-anterior section) was chosen due to its specialized immunological functionality when compared with other intestinal sections (34). In addition, a similar piece of tissue was also dissected and fixed in 10% v/v neutral formaldehyde (pH: 7.2 ± 0.01) buffered with sodium phosphate (0.1M) for histological and histochemical purposes. Water temperature (25.1 ± 1.5°C, range: 22-27°C), oxygen (6.1 ± 0.2 mg l -1 ) (OXI330, Crison Instruments), and pH (7.5 ± 0.01) (pHmeter 507, Crison Instruments, Barcelona, Spain) were daily controlled. Salinity (35‰) (MASTER-20 T; ATAGO Co. Ltd), ammonia (0.13 ± 0.1 mg NH 4+ l -1 ) and nitrite (0.18 ± 0.1 mg NO - l -1 ) levels (HACH DR9000 Colorimeter, Hach®, Spain) were weekly monitored. The trial was run under natural photoperiod according to the season of the year (August to November; 40°37’41”N). Transcriptional Analysis RNA Isolation and Quality Control Total RNA was extracted from mid-anterior intestine of individual fish (n = 12 fish per dietary treatment) using the RNeasy®Mini Kit (Qiagen, Germany). Total RNA from each individual sample was eluted in a final volume of 35 mL nucleasefree water and treated with DNAse using the DNA-free™DNA Removal Kit according to manufacturer’s instructions TABLE 1 | List of ingredients and proximal composition of experimental diets; control and a basal diet supplemented with a medicinal plant leaf extract (MPLE) obtained from sage (Salvia officinalis) and lemon verbena (Lippia citriodora). Ingredients, % Control diet MPLE diet Fishmeal LT70 7.0 7.0 Soy protein concentrate 21.0 21.0 Pea protein concentrate 12.0 12.0 Wheat gluten 12.0 12.0 Corn gluten 12.0 12.0 Soybean meal 48 5.0 5.0 Wheat meal 10.4 10.4 Fish oil (SAVINOR) 15.0 15.0 Vitamin and mineral Premix PV01 1.0 1.0 Soy lecithin –Powder 1.0 1.0 Binder (guar gum) 1.0 1.0 MCP 2.0 2.0 L-Lysine 0.3 0.3 L-Tryptophan 0.1 0.1 DL-Methionine 0.2 0.2 MPLE –0.1 Proximate composition Crude protein, % 48.37 48.37 Crude fat, % 17.19 17.21 Fiber, % 1.52 1.52 Ash, % 5.88 5.88 Gross Energy, MJ/kg 21.62 21.62 MPLE, medicinal plant leaf extract obtained from sage (Salvia officinalis) and lemon verbena (Lippia citriodora). Proximal compositions of the diets were according to Salomon et al. (14), following the AOAC guidelines. Salomo ´n et al. Phytogenics Promotes Fish Gut Health Frontiers in Immunology | www.frontiersin.org May 2021 | Volume 12 | Article 6702793
(Invitrogen, Thermo Fisher Scientific, Lithuania). Total RNA concentration and purity were quantified using a Nanodrop2000®spectrophotometer (Thermo Scientific, USA) and stored at -80°C until analysis. Prior to hybridization with microarrays (3 pooled RNA per dietary condition), four individual RNA samples were pooled by mixing a volume of 1.5 mL [(RNA) = 133.33 ng/μL] per individual sample [final volume = 6 μL; (RNA) = 133.33 ng/μL] and checked for integrity using an Agilent 2100 Bioanalyzer (Agilent Technologies, Spain). Pooled RNA analyzed in this study were selected by the criteria of a RIN value > 8.5 (Supplementary Figure 1). This methodological approach of pooling RNA from four different specimens in each replicate (n = 3 microarray replicates) allowed authors evaluating population’s variability (n = 4 replicate tanks; 1 fish per tank in each pooled RNA; N = 12 animals); however, the information regarding individual variability was lost with this choice. Microarray Hybridization and Analysis Transcriptional analysis was carried out using the Aquagenomics Sparus aurata oligonucleotide microarray v2.0 (4 x 44 K) (SAQ) platform. The detailed information about the platform and the transcriptomic raw data for all samples included in this current analysis is available through the public repository Gene Expression Omnibus (GEO) at the US National Centre for Biotechnology Information (NCBI) (accession number GPL13442 and GSE166558, respectively). Transcriptomic analysis from both experimental groups were conducted as described by Reyes-Lopez et al. (35). Briefly, 200 ng of total RNA from each sample pool was reverse transcribed along with Agilent One-Color RNA spike-in kit (Agilent Technologies, USA). Then, total RNA was used as template for Cyanine-3 (Cy3) labelled cRNA synthesis and amplification with the Quick Amp Labelling kit (Agilent Technologies). cRNA samples were purified using the RNeasy micro kit (Qiagen). Dye incorporation and cRNA yield were checked with the NanoDrop ND-2000®spectrophotometer. Then, 1.5 mg of Cy3-labeled cRNA with specific activity > 6.0 pmol Cy3/mg cRNA were fragmented at 60°C for 30 min, and then the samples were mixed with hybridization buffer and hybridized to the array (ID 025603, Agilent Technologies) at 65°C for 17 h using the Gene expression hybridization kit (Agilent Technologies). The microarray washes were conducted as recommended by the manufacturer using Gene expression wash buffers (Agilent Technologies) and stabilization and drying solution (Agilent Technologies). Microarrays slides were scanned with an Agilent Technologies Scanner (model G2505B); spot intensities and other quality control features were extracted with Agilent’s Feature Extraction software version 10.4.0.0 (Agilent Technologies). Quality reports were checked for each array. Although validation by mean of qPCR is required when there is a high risk of obtaining paralog genes and unspecific hybridization; in our study, we used an oligonucleotide-based microarray, which has probes with a reduced number of bases and high affinity, which avoids the necessity of conducting the validation of gene expression results by qPCR validation. Transcripteractome The Search Tool for the Retrieval of Interacting Genes (STRING) public repository version 11.0 (https://string-db.org) was used in order to obtain the gut transcripteractome for those differentially expressed genes (DEGs) from fish fed the MPLE diet in comparison to the control group (P-value<0.05)(36). This functional network analysis has gained increasing attention because of the association between different genes sorted in different clusters that may have complementary functions into a biological context of response (35). A protein-protein interaction (PPI) network of DEGs was conducted with a high-confidence interaction score (0.9) using Homo sapiens as model organism. Furthermore, to confirm matches of the genes acronyms tag between both H. sapiens and gilthead seabream species Genecards (37) and Uniprot (38) databases were used. In order to confirm match of gene acronyms between both H. sapiens and gilthead seabream species, human orthology identification based on gene/protein name was accessed through the Genecards (www.genecards.org) (37)andUniprot (www.uniprot.org) (UniProt, 2019) databases. Additionally, protein-protein BLAST (BLASTp) were analyzed (E-value < 10 -7 ; query cover > 95%). Gene ontology (GO) enrichment analysis for the DEGs were also performed by STRING (P< 0.05). Histological and Histochemical Analyses Samples (n = 12 fish per experimental diet) were embedded in paraffin and sagitally sectioned (5-6 μm). A total of 576 sections (2 per each sample x 24 samples x 12 techniques) were used for histological and histochemical purposes. Two sections per each sample were stained with hematoxylin–VOF for descriptive purposes; the rest were used for evaluating the histochemical properties of epithelial and mucous cells. In brief, Schiff, Periodic Acid Schiff (PAS), diastase-PAS and Alcian Blue (AB) pH 2.5, 1 and 0.5 (carboxylated and sulphated glycoconjugates/ glycoproteins) techniques were used for studying carbohydrate distribution. Furthermore, several horseradish peroxidase (HRP) conjugated lectins (Sigma-Aldrich, Spain) were used for proper characterization of different glucidic residues bound to the glycoconjugates; in particular, Canavalia ensiformes/ConA (Mannose and/or Glucose), Ulex europeus/UEA-I (L-Fucose), Triticum vulgaris/WGA (N-acetyl-D-glucosamine and/or Nacetylneuraminic acid, NeuNAc/sialic acid/NANA), Glycine max/SBA (a-N-acetyl-D-galactosamine) and Sambucus nigra/ SNA (NeuNAc/sialic acid/NANA). Lectin concentrations ranged between 15 μg ml -1 to 30 μg ml -1 . Regarding negative controls, omission of the respective lectin, substitution of lectin-HPR conjugates by TBS and treatments with different enzymes were performed according to Sarasquete et al. (39). The peroxidase activity was visualized with 3,3-diaminobenzidine tetra hydrochloride/DAB and hydrogen peroxide (0.05%). All the techniques were performed according to Pearse (40)and following proper standardized techniques and protocols (41). All reagents were purchased from Sigma Chemical Co. St Louis, MO, USA. Histological images were taken with a Leitz Wetzlar microscope with a built-in SPOT Insight Color camera (Ernst Leitz Wetzlar GmbH, Germany). Results were manually Salomo ´n et al. Phytogenics Promotes Fish Gut Health Frontiers in Immunology | www.frontiersin.org May 2021 | Volume 12 | Article 6702794
registered using a semi-quantitative assessment scoring based on color intensity scores (0, negative; 1, weak; 2, moderate; 3, intense; 4, very intense) from four independent observers, comparing the sections of the control with the experimental diet. The mucous cell count was determined in four different sites of each histological section, and the number of cells expressed per length unit of the basal lamina of the mucosal epithelium (1 mm) according to Yamamoto et al. (42). Ethics Statement All animal experimental procedures were complied with the Guiding Principles for Biomedical Research Involving Animals (EU2010/63), the guidelines of the Spanish laws (law 32/2007 and RD 1201/2015), and authorized by the Ethical Committee of the Institute for Research and Technology in Food and Agriculture (IRTA, Spain) for the use of laboratory animals. Statistics Extracted raw data from microarrays were imported and analyzed with Genespring version 14.5 GX software (Agilent Technologies). The 75% percentile normalization was used to standardize arrays for comparisons and data were filtered by expression. An unpaired t-test was conducted without correction to identify those DEGs between fish fed control and MPLE diets. The Principal Component Analysis (PCA) was carried out using GeneSpring software, four eigenvectors were calculated to describe the aggrupation of the MPLE and control groups in a 3D plot. Venn diagram and the hierarchical heatmap were all obtained also with Genespring (version 14.5 GX software, Agilent). Changes in the number of mucous cells between experimental diets were analyzed by means of an unpaired ttest assuming data homoscedasticity (Barlett’stest).Allthe analysis were performed using GraphPad PRISM 7.00. The level of significance was set at P< 0.05 for all statistical tests. RESULTS Organization of the Intestine and Mucins’ Histochemistry Produced by Goblet Cells In both experimental groups, the intestinal mucosa was lined by a simple columnar epithelium with basal nuclei, basophilic cytoplasm and prominent brush border with scattered goblet cells. The organization of the lamina propria-submucosa and muscular layers was normal. No signals of histological alterations associated to inflammatory processes in the intestine were observed in fish fed the MPLE diet compared to the control group (Figures 1A, B). Fish fed the MPLE diet showed a higher density of goblet cells along the intestinal epithelium compared to fish fed the control diet (Figure 2). Regarding the histochemical properties of mucins in goblet cells from the anterior intestine, results showed a variable richness of neutral glycoproteins (PAS and diastase-PAS positive) (Table 2). In addition, mucins from goblet cells showed a mixture of carboxylated (AB pH = 2.5) and sulphated acidic groups (weak and strongly ionized; AB pH = 1.0 and pH 0.5, respectively) (Table 2 and Figure 1C). Furthermore, a specificaffinity for WGA, SNA and SBA lectins was detected in the mucinous content of goblet cells (Table 2 and Figures 3A–L). Moreover, no variations were detected in the distribution of mucosal cell glycoconjugates between the upper and the bottom areas of the intestinal folds. When comparing both dietary groups, the dietary administration of the MPLE modified the composition of glycoproteins of mucins produced by goblet cells, with an increase in the staining intensity of neutral mucins, as well as in mucins rich in carboxylated and weakly sulphated glycoconjugates (Table 2 and Figures 1C, D). In addition, an increase in affinity for WGA and SBA lectins and a decrease in the affinity for the SNA lectin was found in the mucinous content of goblet cells, whereas no changes were detected regarding ConA and UEA-I lectins (Table 2 and Figures 3A–L). Microarrays and Gut Transcripteractome A total number of 506 DEGs were found when comparing the transcriptomic profiling of the intestine from gilthead seabream fed the control and MPLE diets (P<0.05;Figure 4A and Supplementary Table 1). Common segregation among the pool samples within the same dietary treatment was observed in the hierarchical clustering for the gut transcriptomic response based in similitude patterns of the DEGs response (P< 0.05; Figure 4B). The observed segregation among dietary treatments is supported by the PCA analysis for the analyzed samples (Figure 4C); in particular, four eigenvectors were calculated and three principal components were plotted, explaining the 83.2% of the total variability [component 1 (X-axis): 45.5%; component 2 (y-axis): 24.4%; component 3 (z-axis): 13.3%]. The detailed analysis of gene absolute fold-change (AFC) revealed that genes were mostly up-regulated in fish fed the MPLE diet (56.3% of DEGs), while its modulation was moderate in terms of AFC intensity (Figure 4). In particular, 285 of the abovementioned DEGs were up-regulated with 219 of them within the 1.0 ≤AFC ≤1.5 interval, 58 DEGs were grouped within the 1.5 ≤AFC ≤2.0, and the last 9 DEGs up-regulated were grouped 2.0 ≤AFC ≤3.0. In contrast, 221 genes were significantly downregulated and grouped in the range -1.0 ≤AFC ≤-3.0. (P< 0.05). In particular, 164 DEGs were mainly concentrated in the -1.0 ≤ AFC ≤-1.5 range. Among them, 42 DEGs were grouped within the -1.5 ≤AFC ≤-2.0 interval, 10 DEGs were felt within the -2.0 ≤AFC ≤-3.0 category, while only 5 were found to have an AFC higher than -3 (Figure 4). From the whole set of DEGs, a functional network analysis was performed. The transcripteractome showed 244 genes with 552 interactions (edges). The remaining 264 DEGs were classified as unknown genes; thus, they were excluded from the analysis. According to GO results and their respective annotation hierarchy, three main representative groups of genes were identified in the transcripteractome among the totality of biological processes obtained from the enrichment analysis (Supplementary Table 2): (1) immune system processes, (2) cellular development and organization, and (3) cellular catabolism (Supplementary Tables 3–5). Table 3 summarizes the most relevant DEGs in fish fed the MPLE diet in relation to the above-mentioned biological processes. Salomo ´n et al. Phytogenics Promotes Fish Gut Health Frontiers in Immunology | www.frontiersin.org May 2021 | Volume 12 | Article 6702795
Regarding the dietary regulation of biological processes related to gut immunity, 18 genes were up-regulated and 14 genes down-regulated in fish fed the MPLE diet. In particular, several relevant GOs related to immunity were obtained such as “T cell activation”(GO:0042110; 7 up-regulated genes; 7 down-regulated genes), “T cell differentiation”(GO:0030217; 6 up-regulated genes; 5 down-regulated genes), “Tcelllineage commitment”(GO:0002360; 3 up-regulated genes; 2 downregulated genes), “leukocyte differentiation”(GO:0002521; 8 upregulated genes; 7 down-regulated genes), “lymphocyte activation” (GO:0046649; 7 up-regulated genes; 9 down-regulated genes), “leukocyte activation”(GO:0045321; 15 up-regulated genes; 12 down-regulated genes), “lymphocyte differentiation” (GO:0030098; 6 up-regulated genes; 6 down-regulated genes), “CD4+ or CD8+, a-bT cell lineage commitment”(GO:0043369; 2 up-regulated genes; 2 down-regulated genes), “Tcellselection” (GO:0045058; 3 up-regulated genes; 2 down-regulated genes) and “intracellular receptor signaling pathway”(GO:0030522; 7 up-regulated genes; 2 down-regulated genes) (Figure 5 and Supplementary Table 3). Furthermore, the MPLE diet promoted the regulation of biological processes associated with cellular development and organization with 19 up-regulated and 14 down-regulated genes. Among them, we found the terms “regulation of adherens junction organization”(GO:1903391; 3 up-regulated genes; 3 down-regulated genes), “regulation of anatomical structure morphogenesis”(GO:0022603; 14 up-regulated genes; 12 downregulated genes), “negative regulation of cell size”(GO:0045792; 2 up-regulated genes; 1 down-regulated gene), “establishment of endothelial barrier”(GO:0061028; 3 up-regulated genes; 1 downregulated gene), “regulation of cell junction assembly” (GO:1901888; 4 up-regulated genes; 2 down-regulated genes), “regulation of cell-substrate adhesion”(GO:0010810; 4 upregulated genes; 5 down-regulated genes), “negative regulation of cell-substrate adhesion”(GO:0010812; 3 up-regulated genes; 2down-regulatedgenes),“regulation of focal adhesion FIGURE 1 | Histological organization in the intestine of gilthead seabream (Sparus aurata) fed a control diet (A), and medicinal plant leaf extract (MPLE)- supplemented diet (B). Numbers indicate the different intestinal layers: (1) mucosa; (2) lamina propria-submucosa; (3) circular muscle layer; (4) longitudinal muscle layer. bb: brush border; mc: mucous cells; sm: serous membrane. Histochemical properties of mucins secreted by intestinal goblet cells with regard to their content on carboxylated and/or sulphated acidic groups (Alcian Blue pH = 2.5) from fish the control diet (C) and the MPLE-supplemented diet (D). mc, mucous cells. The MPLE included in the basal diet was obtained from sage (Salvia officinalis) and lemon verbena (Lippia citriodora). Staining: hematoxylin-VOF (A, B), Alcian Blue pH = 2.5/PAS (C, D). Scale bar = 50 µm. Salomo ´n et al. Phytogenics Promotes Fish Gut Health Frontiers in Immunology | www.frontiersin.org May 2021 | Volume 12 | Article 6702796
assembly”(GO:0051893; 3 up-regulated genes; 2 down-regulated genes), “negative regulation of adherens junction organization” (GO:1903392; 1 up-regulated genes; 1 down-regulated genes), and “cell aging”(GO:0007569; 3 up-regulated genes; 1 down-regulated gene) (Figure 6 and Supplementary Table 4). The tested functional feed additive resulted in the positive regulation of biological processes related to cellular proteolytic processes, showing 35 up-regulated and 11 down-regulated genes. In particular, “cellular macromolecule catabolic process” (GO: 0044265; 23 up-regulated genes; 6 down-regulated genes), “proteolysis”(GO:0006508; 27 up-regulated genes; 8 downregulated genes), “protein catabolic process”(GO:0030163; 20 up-regulated genes; 3 down-regulated genes), “proteolysis involved in cellular protein catabolic process”(GO:0051603; 17 up-regulated genes; 3 down-regulated genes) and “ubiquitin-dependent protein catabolic process”(GO:0006511; 14 up-regulated genes; 3 downregulated genes) were obtained (Figure 7 and Supplementary Table 5). DISCUSSION Considering the close relationship between diet and gut condition and the consequences on the organism and overall health, evaluating the interactions between dietary ingredients and the intestine is of special relevance due to the wide array of functions that have been associated to the gastrointestinal tract (34,43). This is of special relevance when evaluating functional feed additives that are supposed to promote health and nutrition in farmed animals (9,44). In this context, the present study aimed to evaluate the effects of a MPLE from sage and lemon verbena on the transcriptomic profiling, histological organization and lectin histochemistry of the intestine. Extracts from these medicinal plants are reputed for their beneficial pharmacological activities, including antiseptic, antioxidant, and anti-inflammatory properties among others (45–47). Moreover, in gilthead seabream we demonstrated that in addition to act as growth promoters, they modulated systemic immunity when splenocytes were incubated with a bacterial-type pathogen-associated molecular pattern (PAMP) like LPS (14). MPLE From Sage and Lemon Verbena Exert Controlled Immune and ProInflammatory Responses in GALT Fish possess innate and adaptive immune defense systems. The innate parameters are at the forefront of immune defense and are a crucial factor in disease resistance. The adaptive response of fish is essential for long-lasting immunity and is considered as a key factor in improving prophylactic strategies, and the use of functional feeds with immunomodulatory properties (20,48). T cellsareoneofthemainplayersoftheadaptiveimmune response, being the intestine of teleosts an important site of T cells production among mucosal tissues (49,50). In particular, T cells represent the major leucocyte population within the teleost gut (51) with relevant cytotoxic activity (52), as well as playing an important role in foreign antigen recognition and gut homeostasis (53,54). Under the current experimental conditions, MPLE from sage and lemon verbena promoted T cell activation, differentiation and selection in gilthead seabream gut. Thus, the MPLE-supplemented diet induced up-regulation of the mammalian target of rapamycin (mtor) gene in the gut of gilthead seabream. The mTOR signaling pathway has been reported to promote the production of anti-inflammatory cytokines by myeloid immune cells with an important ability to limit the pro-inflammatory mediators (55) thus, playing a crucial role in intestine inflammation, epithelial morphogenesis (56,57), as well as being an important central regulator of immune responses (58,59). The increase in mtor expression may be associated to the down-regulation of nlrc3, which is a negative regulator of the PI3K/AKT/mTOR pathway (60), FIGURE 2 | Goblet cell density in the intestine of gilthead seabream (Sparus aurata) fed a control or a medicinal plant leaf extract (MPLE)-supplemented diet. The MPLE included in the basal diet was obtained from sage (Salvia officinalis) and lemon verbena (Lippia citriodora). The asterisk indicates statistically significant differences among dietary treatments (t-test; P< 0.05). TABLE 2 | Histochemical characteristics and lectin affinity of mucins produced by goblet cells from anterior intestine of gilthead seabream (Sparus aurata)fedthe control and this basal diet supplemented with a medicinal plant leaf extract (MPLE) obtained from sage (Salvia officinalis) and lemon verbena (Lippia citriodora). Control diet MPLE diet General histochemistry Neutral glycoproteins 1 - 2 2 - 3 Carboxylated glycoproteins 1 - 3 3 Weakly inonised sulphated glycoconjugates 2 - 3 3 Strongly ionised sulphated glycoconjugates 2 - 3 2 - 3 Lectin histochemistry ConA (Man/Glu) 0 0 WGA (bGlcNAc>>NeuNAc/sialic acids/NANA) 2 - 3 3 SNA (Neur5Aca2; sialic acids/NANA) 1 - 3 0 SBA (a/bGalNAc) 0 - 3 1 - 3 UEA-I (Fuc) 0 0 Semi-quantitative assessment scoring based on color intensity scores: 0, negative (non detected); 1, weak; 2, moderate; 3, intense; 4, very intense. Salomo ´n et al. Phytogenics Promotes Fish Gut Health Frontiers in Immunology | www.frontiersin.org May 2021 | Volume 12 | Article 6702797
thus suggesting a balanced inflammatory dietary-induced response in the gut of fish fed the MPLE diet. The NF-kB pathway is involved in the transcriptional regulation of several cytokines, chemokines, transcription factors, antimicrobial peptides, and interferon-stimulated genes, playing a critical role in regulating the survival, activation and differentiation of innate and adaptive immune cells (61); thus, playing a key role in regulating gut inflammation (62). In this way, several genes associated with the NF-kB pathway (cyld,clec4e,nlrc3, chi3l1, bcl2)weredifferentially regulated by the dietary supplementation of MPLE. Although scarce information is available for teleost fish, CYLD identified in rainbow trout (Oncorhynchus mykiss)wouldhaveasimilar function as in mammals (63). In our study, cyld was upregulated, which may indicate that in fish fed the MPLE diet this gene acted as an inhibitor of the NF-kB signaling pathway, thus acting as a negative regulator of gut inflammation (63,64). Accordingly, the up-regulation of ubiquitin specific peptidase 4 (usp4) and down-regulation of Ubiquitin specific peptidase 7 (usp7) may be also associated to the inhibition of the activation of NF-kB and mitogen-activated protein kinases stimulated by innate immune receptor (65–67). Additionally, chi3l1 was also up-regulated in fish fed the MPLE diet, promoting cell survival and proliferation, but not acting as a first inflammationresponsive factor. Thus, the differential regulation of the abovementioned genes provide evidence that MPLE might induced inflammatory mechanisms related to the NF-kB signaling pathway (68,69), which involved the production of proinflammatory cytokines (70). In this sense, histological data allow discarding the hypothesis that the administration of the MPLE caused an exacerbated gut inflammation, which would have been potentially detrimental for the health and condition of the intestinal mucosa of the gilthead seabream. The Caspase‐8 is a crucial executor for apoptotic initiation in fish (71). In our study, casp8 was significantly up-regulated in the intestine of fish fed the MPLE-supplemented diet. Several studies have reported the advantageous outcomes of having the casp8 expressed in a controlled way, demonstrating the essential role of this gene in maintaining the gut barrier in response to mucosal pathogens by permitting inflammatory shedding and preventing necroptosis of infected cells (72,73). In addition, stat3 (Signal transducer and activator of transcription 3) was down-regulated, whichsuggestsahealthyintestinalmucosaasthisgeneis positively regulated by pro-inflammatory cytokines under mucosal damage (74). Furthermore, our enrichment analysis showed regulation of biological processes associated with cellular proteolysis, in particular several genes coding for deand ubiquitination (cyld,uba1,ube2a,ube2g1,ube2d2,usp4,usp7) and proteasome (cops4,psmb2,psmd1,psmb5,psmd5,sqstm1) that may be indirectly involved in NF-kB pathway. In addition, degradation of a protein via the ubiquitin-proteasome pathway and subsequent proteolysis are important mechanisms in the FIGURE 3 | Histochemical localization of glycoconjugates containing sugar residues in the intestine of gilthead seabream (Sparus aurata) fed a control or a medicinal plant leaf extract (MPLE)-supplemented diet. Presence of glycoconjugates containing N-acetyl-D-glucosamine and/or N-acetylneuraminic acid residues in mucous cells of S. aurata fed a control (A) (B: negative control) or a MPLE-supplemented diet (C). Note the increase in affinity for WGA lectin in the mucinous content of goblet cells from MPLE diet. Glycoconjugates containing a-N-acetyl-D-galactosamine residues in mucous cells of S. aurata fed a control (D) (E: negative control) or a MPLE-supplemented diet (F). Results denote a moderate increase in affinity for the SBA lectin in the mucous cells from MPLE diet. Histochemical detection of glycoconjugates containing N-acetylneuraminic acid/sialic acid residues in the intestine from control (G) (H: negative control) or MPLE group (I). Note the decrease in affinity for the SNA lectin in the intestinal epithelium of S. aurata fed a MPLE-supplemented diet. Glycoconjugates containing a-mannose/a-glucose residues in intestine from S. aurata fed a control (J) (K: negative control) or a MPLE-supplemented diet (L). Observe the increase in affinity for the ConA lectin in the intestinal epithelium of S. aurata fed a MPLE-supplemented diet. Mucous cells were negative for ConA lectin in both control and MPLE groups. e: epithelium; mc: mucous cells. The MPLE included in the basal diet was obtained from sage (Salvia officinalis) and lemon verbena (Lippia citriodora). Scale bar = 50 µm. Salomo ´n et al. Phytogenics Promotes Fish Gut Health Frontiers in Immunology | www.frontiersin.org May 2021 | Volume 12 | Article 6702798
regulation of cell cycle, cell growth, tissue regeneration, signal transduction, and gene transcription (75). A successful immune response involves the tight control of a wide repertoire of processes including activators and regulators at cellular and molecular level. In this context, another upregulated gene that deserves attention is the Chitinase 3 like 1 (chi3l1). This gene is reputed for regulating the AKT1 signaling pathway (76), which controls innate immune cell development and function (77). Additionally, we found down-regulation of the NOD-like family CARD domain containing 3 (nlrc3), which plays an important role in modulating T cell responsiveness and inhibition of the pro-inflammatory mechanism (78). Besides, galectin 1 (lgals1) was also down-regulated in the intestine of fish fed the MPLE diet. LGALS1 is considered a master regulator of homeostatic signals to shut off T-cell effector functions (79), acting as an immunoregulator and in turn modulating the A B C FIGURE 4 | Differential expression analysis of the gilthead seabream (Sparus aurata) mid-anterior intestine transcriptomic response to MPLE diet. (A) Distribution of the differential expressed genes (DEGs) obtained from the microarray-based transcriptomic analysis. The absolute fold change (AFC) indicates the fold-change magnitude interval of response. (B) Hierarchical clustering of the gilthead seabream mid-anterior intestine transcriptomic response for the control and MPLE diet, based in similitude patterns of the differentially expressed genes (DEGs) detected from three sample pools per dietary group. Data of the six microarrays are depicted, one for each representing the pooled RNA. Genes from each replicate are ordered from lower to higher AFC intensities using the left sample (randomly chosen) as a reference for ordering the other five samples (GeneSpring version 14.5 GX software; Agilent Technologies). Both increased and decreased gene expression pattern is shown in green and red, respectively, according to the color range (bottom). All transcripts represented are statistically significant (P< 0.05). (C) Principal component analysis (PCA) of the DEGs for the gilthead seabream intestine in response to the control (yellow node) and MPLE-supplemented diet (red node). The MPLE included in the basal diet was obtained from sage (Salvia officinalis) and lemon verbena (Lippia citriodora). Salomo ´n et al. Phytogenics Promotes Fish Gut Health Frontiers in Immunology | www.frontiersin.org May 2021 | Volume 12 | Article 6702799
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